RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 MED14O60244 1454 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 DEXIO95424 95 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 CCDC172P0C7W6 258 aa17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.94■□□□□ 0.46
CLSTN1-201ENST00000361311 ADD1P35611 737 aaKnown RBP17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 ATP1A2P50993 1020 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 GCKRQ14397 625 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 METTL22Q9BUU2 404 aaPredicted RBP17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 HAUS4Q9H6D7 363 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 KCNJ14Q9UNX9 436 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 CEP85LQ5SZL2 805 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 UBLCP1Q8WVY7 318 aaPredicted RBP17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 TLR7Q9NYK1 1049 aaKnown RBP17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 CPSF1Q10570 1443 aaKnown RBP17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 TSPY2A6NKD2 308 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 EYA2O00167 538 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 PPFIA4O75335 1185 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 CCDC50Q8IVM0 306 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 TRIML1Q8N9V2 468 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 CARMIL3Q8ND23 1372 aa17.93■□□□□ 0.46
CLSTN1-201ENST00000361311 AK9Q5TCS8 1911 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 EIF3CLB5ME19 914 aaKnown RBP17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 E7EVH7 732 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 CCZ1BP86790 482 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 CCZ1P86791 482 aaPredicted RBP17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 PLIN2Q99541 437 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 EIF3CQ99613 913 aaKnown RBP17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 NOC4LQ9BVI4 516 aaKnown RBP17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 SAMD15Q9P1V8 674 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 CASP14P31944 242 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 PAK2Q13177 524 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 HINFPQ9BQA5 517 aa17.92■□□□□ 0.46
CLSTN1-201ENST00000361311 SMIM23A6NLE4 172 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 GOLGA8KD6RF30 607 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 CLGNO14967 610 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 KIF4AO95239 1232 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 NFATC2IPQ8NCF5 419 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 TNRQ92752 1358 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 TOB2Q14106 344 aaPredicted RBP17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 POLA2Q14181 598 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 IQCB1Q15051 598 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 SPATA1Q5VX52 437 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 C19orf44Q9H6X5 657 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 EPN1Q9Y6I3 576 aaPredicted RBP17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 PLCD1P51178 756 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 UBE4AQ14139 1066 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 E4F1Q66K89 784 aaPredicted RBP17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 CSGALNACT2Q8N6G5 542 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 TADA3O75528 432 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 GOLPH3LQ9H4A5 285 aa17.91■□□□□ 0.46
CLSTN1-201ENST00000361311 MAGEA1P43355 309 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 SPTY2D1Q68D10 685 aaPredicted RBP17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 TTC19Q6DKK2 380 aaPredicted RBP17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 PNMA8AQ86V59 439 aaPredicted RBP17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 NUP58Q9BVL2 599 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 KAT14Q9H8E8 782 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 PPANQ9NQ55 473 aaKnown RBP17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 SOWAHDA6NJG2 315 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 DTHD1Q6ZMT9 781 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 ENC1O14682 589 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 TRIM66O15016 1216 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 ZMYND10O75800 440 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 CAVIN4Q5BKX8 364 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 ARMCX5Q6P1M9 558 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 SPATS2Q86XZ4 545 aaKnown RBP17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 NELFBQ8WX92 580 aa17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 FEZ2Q9UHY8 353 aaPredicted RBP17.9■□□□□ 0.46
CLSTN1-201ENST00000361311 KCNQ3O43525 872 aa17.89■□□□□ 0.46
CLSTN1-201ENST00000361311 MMS22LQ6ZRQ5 1243 aa17.89■□□□□ 0.46
CLSTN1-201ENST00000361311 NOSTRINQ8IVI9 506 aa17.89■□□□□ 0.46
CLSTN1-201ENST00000361311 ST5P78524 1137 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 RUFY4Q6ZNE9 571 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 SMARCC2Q8TAQ2 1214 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 HAUS7Q99871 368 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 BAIAP2L1Q9UHR4 511 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 REREQ9P2R6 1566 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 BUB1BO60566 1050 aaPredicted RBP17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 CALML3P27482 149 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 MCTP2Q6DN12 878 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 DHX40Q8IX18 779 aaKnown RBP17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 ZNF444Q8N0Y2 327 aaPredicted RBP17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 MYO1AQ9UBC5 1043 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 SAMM50Q9Y512 469 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 SARNPP82979 210 aaKnown RBP17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 TADA2BQ86TJ2 420 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 LRRC45Q96CN5 670 aa17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.45
CLSTN1-201ENST00000361311 RTL9Q8NET4 1388 aa17.88■□□□□ 0.45
CLSTN1-201ENST00000361311 CYP7A1P22680 504 aa17.88■□□□□ 0.45
CLSTN1-201ENST00000361311 RBL2Q08999 1139 aa17.88■□□□□ 0.45
CLSTN1-201ENST00000361311 SRLQ86TD4 932 aa17.88■□□□□ 0.45
CLSTN1-201ENST00000361311 BLZF1Q9H2G9 400 aa17.88■□□□□ 0.45
CLSTN1-201ENST00000361311 NOX5Q96PH1 765 aa17.88■□□□□ 0.45
CLSTN1-201ENST00000361311 DBNLQ9UJU6 430 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms