RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MYH2Q9UKX2 1941 aa26.2■■□□□ 1.78
LDB1-201ENST00000361198 FMNL1O95466 1100 aaPredicted RBP26.19■■□□□ 1.78
LDB1-201ENST00000361198 ANO1Q5XXA6 986 aa26.19■■□□□ 1.78
LDB1-201ENST00000361198 CNBD1Q8NA66 436 aa26.19■■□□□ 1.78
LDB1-201ENST00000361198 MRPS27Q92552 414 aaKnown RBP26.19■■□□□ 1.78
LDB1-201ENST00000361198 UBAC1Q9BSL1 405 aa26.19■■□□□ 1.78
LDB1-201ENST00000361198 STK36Q9NRP7 1315 aa26.19■■□□□ 1.78
LDB1-201ENST00000361198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.19■■□□□ 1.78
LDB1-201ENST00000361198 KINO60870 393 aaKnown RBP26.19■■□□□ 1.78
LDB1-201ENST00000361198 RTN1Q16799 776 aa26.19■■□□□ 1.78
LDB1-201ENST00000361198 PLA2G4DQ86XP0 818 aa26.19■■□□□ 1.78
LDB1-201ENST00000361198 A0A1B0GVL5 298 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 A0A1W2PQ27 194 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 A0A1W2PQ64 194 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 A0A1W2PQD8 194 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 CTAGE5O15320 804 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 ZNF165P49910 485 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.18■■□□□ 1.78
LDB1-201ENST00000361198 DNAJC25Q9H1X3 360 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 AATFQ9NY61 560 aaKnown RBP eCLIP26.18■■□□□ 1.784e-6■■□□□ 11.7
LDB1-201ENST00000361198 GUCY1A2P33402 732 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 GRAPQ13588 217 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 SEC23AQ15436 765 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 CTR9Q6PD62 1173 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 FMR1NBQ8N0W7 255 aaPredicted RBP26.18■■□□□ 1.78
LDB1-201ENST00000361198 GRAPLQ8TC17 118 aaPredicted RBP26.18■■□□□ 1.78
LDB1-201ENST00000361198 TNKSO95271 1327 aa26.18■■□□□ 1.78
LDB1-201ENST00000361198 ZNF654Q8IZM8 581 aa26.17■■□□□ 1.78
LDB1-201ENST00000361198 ANKIB1Q9P2G1 1089 aa26.17■■□□□ 1.78
LDB1-201ENST00000361198 TRIM29Q14134 588 aa26.17■■□□□ 1.78
LDB1-201ENST00000361198 CMTR1Q8N1G2 835 aaKnown RBP26.17■■□□□ 1.78
LDB1-201ENST00000361198 CCDC82Q8N4S0 544 aa26.17■■□□□ 1.78
LDB1-201ENST00000361198 USP17L12C9JPN9 530 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 USP17L21D6R901 530 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 PRDM1O75626 825 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 NDUFA8P51970 172 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 GNL2Q13823 731 aaKnown RBP26.16■■□□□ 1.78
LDB1-201ENST00000361198 FANCBQ8NB91 859 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 NUP133Q8WUM0 1156 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 DUOX1Q9NRD9 1551 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.16■■□□□ 1.78
LDB1-201ENST00000361198 ADRA2BP18089 450 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 U2AF2P26368 475 aaKnown RBP eCLIP26.16■■□□□ 1.78
LDB1-201ENST00000361198 ZNF75DP51815 510 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 PRR5LQ6MZQ0 368 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 NBPF11Q86T75 865 aa26.16■■□□□ 1.78
LDB1-201ENST00000361198 PTGS1P23219 599 aa26.15■■□□□ 1.78
LDB1-201ENST00000361198 EVX2Q03828 476 aa26.15■■□□□ 1.78
LDB1-201ENST00000361198 RCAN1P53805 252 aa26.14■■□□□ 1.78
LDB1-201ENST00000361198 SLC39A14Q15043 492 aa26.14■■□□□ 1.78
LDB1-201ENST00000361198 AXDND1Q5T1B0 1012 aaPredicted RBP26.14■■□□□ 1.78
LDB1-201ENST00000361198 CERKQ8TCT0 537 aa26.14■■□□□ 1.78
LDB1-201ENST00000361198 CCDC88AQ3V6T2 1871 aa26.14■■□□□ 1.78
LDB1-201ENST00000361198 FGRP09769 529 aa26.14■■□□□ 1.77
LDB1-201ENST00000361198 CRACR2BQ8N4Y2 399 aaPredicted RBP26.14■■□□□ 1.77
LDB1-201ENST00000361198 ENAHQ8N8S7 591 aaPredicted RBP26.14■■□□□ 1.77
LDB1-201ENST00000361198 WASF1Q92558 559 aa26.14■■□□□ 1.77
LDB1-201ENST00000361198 ZSCAN10Q96SZ4 725 aaPredicted RBP26.14■■□□□ 1.77
LDB1-201ENST00000361198 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.14■■□□□ 1.77
LDB1-201ENST00000361198 DCP1AQ9NPI6 582 aaPredicted RBP26.14■■□□□ 1.77
LDB1-201ENST00000361198 CCDC196A0A1B0GTZ2 297 aa26.13■■□□□ 1.77
LDB1-201ENST00000361198 TRIM22Q8IYM9 498 aa26.13■■□□□ 1.77
LDB1-201ENST00000361198 UBR3Q6ZT12 1888 aa26.13■■□□□ 1.77
LDB1-201ENST00000361198 WDHD1O75717 1129 aaPredicted RBP26.13■■□□□ 1.77
LDB1-201ENST00000361198 GYS1P13807 737 aa26.13■■□□□ 1.77
LDB1-201ENST00000361198 MARCKSP29966 332 aaPredicted RBP26.13■■□□□ 1.77
LDB1-201ENST00000361198 ERCC4Q92889 916 aaPredicted RBP26.13■■□□□ 1.77
LDB1-201ENST00000361198 CRNKL1Q9BZJ0 848 aaKnown RBP26.13■■□□□ 1.77
LDB1-201ENST00000361198 TRIM5Q9C035 493 aa26.13■■□□□ 1.77
LDB1-201ENST00000361198 LEMD3Q9Y2U8 911 aa26.13■■□□□ 1.77
LDB1-201ENST00000361198 IQCB1Q15051 598 aa26.12■■□□□ 1.77
LDB1-201ENST00000361198 CCDC186Q7Z3E2 898 aa26.12■■□□□ 1.77
LDB1-201ENST00000361198 ZBTB22O15209 634 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 PCP11498 1178 aaKnown RBP26.11■■□□□ 1.77
LDB1-201ENST00000361198 SARM1Q6SZW1 724 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 C11orf57Q6ZUT1 292 aaPredicted RBP26.11■■□□□ 1.77
LDB1-201ENST00000361198 MAP3K14Q99558 947 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 QTRT2Q9H974 415 aaKnown RBP26.11■■□□□ 1.77
LDB1-201ENST00000361198 XDHP47989 1333 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 A0A087WWV3 80 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 DEXIO95424 95 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 MMP1P03956 469 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 CDC25BP30305 580 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 PTPAQ15257 358 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 STX1AQ16623 288 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 DZIP1Q86YF9 867 aaKnown RBP26.11■■□□□ 1.77
LDB1-201ENST00000361198 SDF4Q9BRK5 362 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 ATP8A2Q9NTI2 1148 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 KCNJ14Q9UNX9 436 aa26.11■■□□□ 1.77
LDB1-201ENST00000361198 MAST2Q6P0Q8 1798 aa26.1■■□□□ 1.77
LDB1-201ENST00000361198 BTBD18B2RXH4 712 aa26.1■■□□□ 1.77
LDB1-201ENST00000361198 GPR101Q96P66 508 aaPredicted RBP26.1■■□□□ 1.77
LDB1-201ENST00000361198 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.1■■□□□ 1.77
LDB1-201ENST00000361198 CMA1P23946 247 aa26.09■■□□□ 1.77
LDB1-201ENST00000361198 IFIT1BQ5T764 474 aaKnown RBP26.09■■□□□ 1.77
LDB1-201ENST00000361198 SPTY2D1Q68D10 685 aaPredicted RBP26.09■■□□□ 1.77
LDB1-201ENST00000361198 IQCA1Q86XH1 822 aa26.09■■□□□ 1.77
LDB1-201ENST00000361198 NOSTRINQ8IVI9 506 aa26.09■■□□□ 1.77
LDB1-201ENST00000361198 RPGRQ92834 1020 aaKnown RBP26.09■■□□□ 1.77
LDB1-201ENST00000361198 MROH7-TTC4A0A0A0MT08 1334 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms