RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.55
SCAF1-201ENST00000360565 TACC1O75410 805 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 PPARAQ07869 468 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
SCAF1-201ENST00000360565 MRFAP1L1Q96HT8 127 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 MAP3K15Q6ZN16 1313 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 SYNRGQ9UMZ2 1314 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 BICDL2A1A5D9 508 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 CIAO1O76071 339 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
SCAF1-201ENST00000360565 GYG1P46976 350 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 ZNF827Q17R98 1081 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 ZMYM6O95789 1325 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 M0R2C6 588 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 TBC1D8BQ0IIM8 1120 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 SLFNL1Q499Z3 407 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 FANCBQ8NB91 859 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 TDRD7Q8NHU6 1098 aaKnown RBP18.45■□□□□ 0.54
SCAF1-201ENST00000360565 ERMNQ8TAM6 284 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 RTEL1Q9NZ71 1219 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 RCOR1Q9UKL0 485 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 PTPRMP28827 1452 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 ABCA9Q8IUA7 1624 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 FAM47AQ5JRC9 791 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 ZBTB1Q9Y2K1 713 aa18.45■□□□□ 0.54
SCAF1-201ENST00000360565 CYP27B1O15528 508 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
SCAF1-201ENST00000360565 UBE3CQ15386 1083 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 CLEC17AQ6ZS10 378 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 CDCA7Q9BWT1 371 aaPredicted RBP18.44■□□□□ 0.54
SCAF1-201ENST00000360565 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 NEFHP12036 1026 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 LRRC8AQ8IWT6 810 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 APOA5Q6Q788 366 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 SYCP3Q8IZU3 236 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 CARMIL3Q8ND23 1372 aa18.44■□□□□ 0.54
SCAF1-201ENST00000360565 PHACTR2O75167 634 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 PPP2R3AQ06190 1150 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 CCDC122Q5T0U0 273 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 TTC14Q96N46 770 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 GPHNQ9NQX3 736 aaPredicted RBP18.43■□□□□ 0.54
SCAF1-201ENST00000360565 IFFO1Q0D2I5 559 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 CETN1Q12798 172 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 BCCIPQ9P287 314 aaKnown RBP eCLIP18.43■□□□□ 0.54
SCAF1-201ENST00000360565 TOM1O60784 492 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 PLCD1P51178 756 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 PUS7LQ9H0K6 701 aaKnown RBP18.43■□□□□ 0.54
SCAF1-201ENST00000360565 TNKSO95271 1327 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 IQSEC2Q5JU85 1478 aa18.43■□□□□ 0.54
SCAF1-201ENST00000360565 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 KRT9P35527 623 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 PDE4DQ08499 809 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
SCAF1-201ENST00000360565 C11orf57Q6ZUT1 292 aaPredicted RBP18.42■□□□□ 0.54
SCAF1-201ENST00000360565 SAMM50Q9Y512 469 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 ADKP55263 362 aaKnown RBP18.42■□□□□ 0.54
SCAF1-201ENST00000360565 TFAP4Q01664 338 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 FERMT2Q96AC1 680 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 CCDC113Q9H0I3 377 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 FANCLQ9NW38 375 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 RPS8P62241 208 aaKnown RBP18.42■□□□□ 0.54
SCAF1-201ENST00000360565 RESTQ13127 1097 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 PAK1Q13153 545 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 TMEM87AQ8NBN3 555 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 ZFP91Q96JP5 570 aaPredicted RBP18.42■□□□□ 0.54
SCAF1-201ENST00000360565 PRM3Q9NNZ6 103 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 TAB2Q9NYJ8 693 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 UBAP1LF5GYI3 381 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 SF3B2Q13435 895 aaKnown RBP18.42■□□□□ 0.54
SCAF1-201ENST00000360565 SPECC1LQ69YQ0 1117 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 CARD10Q9BWT7 1032 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 BLZF1Q9H2G9 400 aa18.42■□□□□ 0.54
SCAF1-201ENST00000360565 EIF6P56537 245 aaKnown RBP18.41■□□□□ 0.54
SCAF1-201ENST00000360565 RBM6P78332 1123 aaKnown RBP18.41■□□□□ 0.54
SCAF1-201ENST00000360565 TOB2Q14106 344 aaPredicted RBP18.41■□□□□ 0.54
SCAF1-201ENST00000360565 DPCR1Q3MIW9 517 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 CACTINQ8WUQ7 758 aaKnown RBP18.41■□□□□ 0.54
SCAF1-201ENST00000360565 PCDHA5Q9Y5H7 936 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 CRB1P82279 1406 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 UFL1O94874 794 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 SLC39A14Q15043 492 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 KIAA1524Q8TCG1 905 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 GOPCQ9HD26 462 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 ZNF215Q9UL58 517 aaPredicted RBP18.41■□□□□ 0.54
SCAF1-201ENST00000360565 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 CSGALNACT2Q8N6G5 542 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
SCAF1-201ENST00000360565 STXBP4Q6ZWJ1 553 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 NEK11Q8NG66 645 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 CCNL1Q9UK58 526 aaPredicted RBP18.4■□□□□ 0.54
SCAF1-201ENST00000360565 H7C1W4 665 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 KRBA2Q6ZNG9 492 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 LINC00301Q8NCQ3 95 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 GTPBP4Q9BZE4 634 aaKnown RBP18.4■□□□□ 0.54
SCAF1-201ENST00000360565 GPCPD1Q9NPB8 672 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms