RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 IMMTQ16891 758 aaKnown RBP30.21■■■□□ 2.43
SSBP3-202ENST00000357475 ZNF784Q8NCA9 323 aaPredicted RBP30.21■■■□□ 2.43
SSBP3-202ENST00000357475 DHX36Q9H2U1 1008 aaKnown RBP30.21■■■□□ 2.43
SSBP3-202ENST00000357475 EPB41L2O43491 1005 aaKnown RBP30.2■■■□□ 2.42
SSBP3-202ENST00000357475 NKX2-3Q8TAU0 364 aa30.2■■■□□ 2.42
SSBP3-202ENST00000357475 DNAJC18Q9H819 358 aa30.2■■■□□ 2.42
SSBP3-202ENST00000357475 STOX1Q6ZVD7 989 aa30.19■■■□□ 2.42
SSBP3-202ENST00000357475 TTC6Q86TZ1 520 aa30.19■■■□□ 2.42
SSBP3-202ENST00000357475 ANAPC4Q9UJX5 808 aa30.19■■■□□ 2.42
SSBP3-202ENST00000357475 ROBO3Q96MS0 1386 aa30.19■■■□□ 2.42
SSBP3-202ENST00000357475 MYH8P13535 1937 aa30.19■■■□□ 2.42
SSBP3-202ENST00000357475 TRAF5O00463 557 aa30.18■■■□□ 2.42
SSBP3-202ENST00000357475 COL9A3Q14050 684 aaPredicted RBP30.18■■■□□ 2.42
SSBP3-202ENST00000357475 PI4KBQ9UBF8 816 aa30.18■■■□□ 2.42
SSBP3-202ENST00000357475 HLA-DOAP06340 250 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 GABPAQ06546 454 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 CDC37L1Q7L3B6 337 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 MIGA2Q7L4E1 593 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 AMOTL1Q8IY63 956 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 KCNB2Q92953 911 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 FZD1Q9UP38 647 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 PPP2R3BQ9Y5P8 575 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 SNX14Q9Y5W7 946 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 EIF5BO60841 1220 aaKnown RBP30.17■■■□□ 2.42
SSBP3-202ENST00000357475 CDCA5Q96FF9 252 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 C22orf23Q9BZE7 217 aa30.17■■■□□ 2.42
SSBP3-202ENST00000357475 PRDM1O75626 825 aa30.16■■■□□ 2.42
SSBP3-202ENST00000357475 SERPINB13Q9UIV8 391 aa30.16■■■□□ 2.42
SSBP3-202ENST00000357475 NEDD4P46934 1319 aa30.15■■■□□ 2.42
SSBP3-202ENST00000357475 C16orf86Q6ZW13 317 aa30.15■■■□□ 2.42
SSBP3-202ENST00000357475 EHD4Q9H223 541 aa30.15■■■□□ 2.42
SSBP3-202ENST00000357475 E7EWF7 191 aa30.14■■■□□ 2.42
SSBP3-202ENST00000357475 ADCK5Q3MIX3 580 aa30.14■■■□□ 2.42
SSBP3-202ENST00000357475 CHADLQ6NUI6 762 aa30.14■■■□□ 2.42
SSBP3-202ENST00000357475 METTL16Q86W50 562 aaKnown RBP30.14■■■□□ 2.42
SSBP3-202ENST00000357475 CDK8P49336 464 aa30.13■■■□□ 2.41
SSBP3-202ENST00000357475 AKNAD1Q5T1N1 836 aa30.13■■■□□ 2.41
SSBP3-202ENST00000357475 CRACR2BQ8N4Y2 399 aaPredicted RBP30.13■■■□□ 2.41
SSBP3-202ENST00000357475 STAG1Q8WVM7 1258 aa30.13■■■□□ 2.41
SSBP3-202ENST00000357475 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.13■■■□□ 2.413e-6■■■□□ 18.4
SSBP3-202ENST00000357475 SHMT1P34896 483 aa30.12■■■□□ 2.41
SSBP3-202ENST00000357475 RRP1BQ14684 758 aaKnown RBP30.12■■■□□ 2.41
SSBP3-202ENST00000357475 RNF20Q5VTR2 975 aa30.12■■■□□ 2.41
SSBP3-202ENST00000357475 FOXP4Q8IVH2 680 aaPredicted RBP30.12■■■□□ 2.41
SSBP3-202ENST00000357475 UPF2Q9HAU5 1272 aaKnown RBP30.12■■■□□ 2.41
SSBP3-202ENST00000357475 MCCP23508 829 aa30.12■■■□□ 2.41
SSBP3-202ENST00000357475 TBC1D32Q96NH3 1257 aa30.12■■■□□ 2.41
SSBP3-202ENST00000357475 RBM25P49756 843 aaKnown RBP30.11■■■□□ 2.41
SSBP3-202ENST00000357475 SHROOM1Q2M3G4 852 aaPredicted RBP30.11■■■□□ 2.41
SSBP3-202ENST00000357475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.11■■■□□ 2.411e-6■■■■■ 31.8
SSBP3-202ENST00000357475 ITGBL1O95965 494 aaPredicted RBP30.1■■■□□ 2.41
SSBP3-202ENST00000357475 FGRP09769 529 aa30.1■■■□□ 2.41
SSBP3-202ENST00000357475 MAP3K10Q02779 954 aa30.1■■■□□ 2.41
SSBP3-202ENST00000357475 PRKG1Q13976 671 aa30.1■■■□□ 2.41
SSBP3-202ENST00000357475 TSGA10IPQ3SY00 556 aa30.1■■■□□ 2.41
SSBP3-202ENST00000357475 RRP12Q5JTH9 1297 aaKnown RBP30.1■■■□□ 2.41
SSBP3-202ENST00000357475 MFSD6Q6ZSS7 791 aa30.1■■■□□ 2.41
SSBP3-202ENST00000357475 ZKSCAN1P17029 563 aaPredicted RBP30.09■■■□□ 2.41
SSBP3-202ENST00000357475 KIF2CQ99661 725 aa30.09■■■□□ 2.41
SSBP3-202ENST00000357475 HERC5Q9UII4 1024 aaKnown RBP30.09■■■□□ 2.41
SSBP3-202ENST00000357475 PAPPA2Q9BXP8 1791 aa30.08■■■□□ 2.41
SSBP3-202ENST00000357475 B4E1Z4 1266 aa30.08■■■□□ 2.41
SSBP3-202ENST00000357475 TBC1D12O60347 775 aa30.08■■■□□ 2.41
SSBP3-202ENST00000357475 SLC3A2P08195 630 aaKnown RBP30.08■■■□□ 2.41
SSBP3-202ENST00000357475 RASA1P20936 1047 aa30.08■■■□□ 2.41
SSBP3-202ENST00000357475 TOMM22Q9NS69 142 aa30.08■■■□□ 2.41
SSBP3-202ENST00000357475 OTOFQ9HC10 1997 aa30.08■■■□□ 2.41
SSBP3-202ENST00000357475 ATAD5Q96QE3 1844 aa30.08■■■□□ 2.41
SSBP3-202ENST00000357475 CPA1P15085 419 aa30.07■■■□□ 2.4
SSBP3-202ENST00000357475 JAG1P78504 1218 aa30.07■■■□□ 2.4
SSBP3-202ENST00000357475 PDE4BQ07343 736 aa30.07■■■□□ 2.4
SSBP3-202ENST00000357475 SUPT20HL1Q3ZLR7 823 aa30.07■■■□□ 2.4
SSBP3-202ENST00000357475 TATDN1Q6P1N9 297 aa30.07■■■□□ 2.4
SSBP3-202ENST00000357475 TRIM34Q9BYJ4 488 aa30.07■■■□□ 2.4
SSBP3-202ENST00000357475 MKNK2Q9HBH9 465 aa30.07■■■□□ 2.4
SSBP3-202ENST00000357475 PHF20L1A8MW92 1017 aa30.06■■■□□ 2.4
SSBP3-202ENST00000357475 FAM47AQ5JRC9 791 aa30.06■■■□□ 2.4
SSBP3-202ENST00000357475 MOB2Q70IA6 237 aa30.06■■■□□ 2.4
SSBP3-202ENST00000357475 JAKMIP1Q96N16 626 aaKnown RBP30.06■■■□□ 2.4
SSBP3-202ENST00000357475 ZNF408Q9H9D4 720 aa30.06■■■□□ 2.4
SSBP3-202ENST00000357475 SWAP70Q9UH65 585 aa30.06■■■□□ 2.4
SSBP3-202ENST00000357475 TRPM7Q96QT4 1865 aa30.06■■■□□ 2.4
SSBP3-202ENST00000357475 ORC4O43929 436 aa30.06■■■□□ 2.4
SSBP3-202ENST00000357475 RNF41Q9H4P4 317 aaPredicted RBP30.06■■■□□ 2.4
SSBP3-202ENST00000357475 AKR1B1P15121 316 aa30.05■■■□□ 2.4
SSBP3-202ENST00000357475 CYB5R4Q7L1T6 521 aa30.05■■■□□ 2.4
SSBP3-202ENST00000357475 GREB1LQ9C091 1923 aaPredicted RBP30.04■■■□□ 2.4
SSBP3-202ENST00000357475 RANBP6O60518 1105 aaKnown RBP30.04■■■□□ 2.4
SSBP3-202ENST00000357475 USP2O75604 605 aaPredicted RBP30.04■■■□□ 2.4
SSBP3-202ENST00000357475 GDF11O95390 407 aa30.04■■■□□ 2.4
SSBP3-202ENST00000357475 ANAPC15P60006 121 aa30.04■■■□□ 2.4
SSBP3-202ENST00000357475 CHST3Q7LGC8 479 aa30.04■■■□□ 2.4
SSBP3-202ENST00000357475 MB21D2Q8IYB1 491 aaPredicted RBP30.04■■■□□ 2.4
SSBP3-202ENST00000357475 KDM4AO75164 1064 aa30.03■■■□□ 2.4
SSBP3-202ENST00000357475 DCAF15Q66K64 600 aa30.03■■■□□ 2.4
SSBP3-202ENST00000357475 IL17RAQ96F46 866 aa30.03■■■□□ 2.4
SSBP3-202ENST00000357475 NEK1Q96PY6 1258 aa30.03■■■□□ 2.4
SSBP3-202ENST00000357475 ZNF341Q9BYN7 854 aa30.03■■■□□ 2.4
SSBP3-202ENST00000357475 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.03■■■□□ 2.4
SSBP3-202ENST00000357475 TOMM70O94826 608 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms