RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 HOMER1Q86YM7 354 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 DDX60Q8IY21 1712 aaKnown RBP9.04□□□□□ -0.96
PDE1A-201ENST00000351439 ITFG2Q969R8 447 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 FAXDC2Q96IV6 333 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 MPHOSPH8Q99549 860 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 CARD6Q9BX69 1037 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 PUS7LQ9H0K6 701 aaKnown RBP9.04□□□□□ -0.96
PDE1A-201ENST00000351439 MYH7P12883 1935 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 MYO5AQ9Y4I1 1855 aaKnown RBP9.04□□□□□ -0.96
PDE1A-201ENST00000351439 C4AP0C0L4 1744 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 C4BP0C0L5 1744 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 SLC3A2P08195 630 aaKnown RBP9.04□□□□□ -0.96
PDE1A-201ENST00000351439 ANTXR2P58335 489 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 IMMTQ16891 758 aaKnown RBP9.04□□□□□ -0.96
PDE1A-201ENST00000351439 GORABQ5T7V8 394 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 FAM71BQ8TC56 605 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 KCNG4Q8TDN1 519 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 XAGE2Q96GT9 111 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 PARD6BQ9BYG5 372 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 NBPF3Q9H094 633 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 POLR3EQ9NVU0 708 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 DENND2AQ9ULE3 1009 aa9.04□□□□□ -0.96
PDE1A-201ENST00000351439 POTEB2H3BUK9 544 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 LMOD1P29536 600 aaPredicted RBP9.03□□□□□ -0.96
PDE1A-201ENST00000351439 MARCKSP29966 332 aaPredicted RBP9.03□□□□□ -0.96
PDE1A-201ENST00000351439 ELF1P32519 619 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 TTC39AQ5SRH9 613 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 SYNE3Q6ZMZ3 975 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 MB21D2Q8IYB1 491 aaPredicted RBP9.03□□□□□ -0.96
PDE1A-201ENST00000351439 FBXL16Q8N461 479 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 FAM210AQ96ND0 272 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 AIFM3Q96NN9 605 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 MROH7-TTC4A0A0A0MT08 1334 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 CPLX1O14810 134 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 WDHD1O75717 1129 aaPredicted RBP9.03□□□□□ -0.96
PDE1A-201ENST00000351439 CIAO1O76071 339 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 URI1O94763 535 aaPredicted RBP9.03□□□□□ -0.96
PDE1A-201ENST00000351439 YEATS4O95619 227 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 PFKFB1P16118 471 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 RXRAP19793 462 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 TXLNAP40222 546 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 ZAP70P43403 619 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 USP5P45974 858 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 CRYMQ14894 314 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 NCAPHQ15003 741 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 TRIM65Q6PJ69 517 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 TEX11Q8IYF3 940 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 VEZTQ9HBM0 779 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 PARP3Q9Y6F1 533 aa9.03□□□□□ -0.96
PDE1A-201ENST00000351439 ERLIN1O75477 346 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 ATP1A3P13637 1013 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 GCFC2P16383 781 aaKnown RBP9.02□□□□□ -0.97
PDE1A-201ENST00000351439 SCP2P22307 547 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 NLRP12P59046 1061 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 KIF23Q02241 960 aaPredicted RBP9.02□□□□□ -0.97
PDE1A-201ENST00000351439 CCDC57Q2TAC2 916 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 HSP90B2PQ58FF3 399 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 ANO1Q5XXA6 986 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 KCNV1Q6PIU1 500 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 FCHSD1Q86WN1 690 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 NCOA7Q8NI08 942 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 KAT2BQ92831 832 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 ACBD3Q9H3P7 528 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 ZNF330Q9Y3S2 320 aaPredicted RBP9.02□□□□□ -0.97
PDE1A-201ENST00000351439 ECM29Q5VYK3 1845 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 TMEM94Q12767 1356 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 ZNF213O14771 459 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 SFPQP23246 707 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDE1A-201ENST00000351439 GPTP24298 496 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 PTPN21Q16825 1174 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 BRAPQ7Z569 592 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 RALYLQ86SE5 291 aaKnown RBP9.02□□□□□ -0.97
PDE1A-201ENST00000351439 PRPF38AQ8NAV1 312 aaKnown RBP9.02□□□□□ -0.97
PDE1A-201ENST00000351439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.02□□□□□ -0.97
PDE1A-201ENST00000351439 GOLGA1Q92805 767 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 HSD3B7Q9H2F3 369 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 C19orf44Q9H6X5 657 aa9.02□□□□□ -0.97
PDE1A-201ENST00000351439 UBR2Q8IWV8 1755 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 AKAP11Q9UKA4 1901 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 GPAA1O43292 621 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 TOM1O60784 492 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 TUBBP07437 444 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 CABS1Q96KC9 395 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 MCM8Q9UJA3 840 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 MST1RQ04912 1400 aa9.01□□□□□ -0.97
PDE1A-201ENST00000351439 GOLGA6L9A6NEM1 432 aa9□□□□□ -0.97
PDE1A-201ENST00000351439 CHUKO15111 745 aa9□□□□□ -0.97
PDE1A-201ENST00000351439 CMA1P23946 247 aa9□□□□□ -0.97
PDE1A-201ENST00000351439 MRPL12P52815 198 aaKnown RBP9□□□□□ -0.97
PDE1A-201ENST00000351439 FANCCQ00597 558 aa9□□□□□ -0.97
PDE1A-201ENST00000351439 SLC39A14Q15043 492 aa9□□□□□ -0.97
PDE1A-201ENST00000351439 BEND6Q5SZJ8 279 aaPredicted RBP9□□□□□ -0.97
PDE1A-201ENST00000351439 CNNM3Q8NE01 707 aa9□□□□□ -0.97
PDE1A-201ENST00000351439 APPBP2Q92624 585 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms