RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 LY9Q9HBG7 655 aa27.4■■□□□ 1.98
USP25-203ENST00000351097 BRAPQ7Z569 592 aa27.39■■□□□ 1.98
USP25-203ENST00000351097 MRFAP1L1Q96HT8 127 aa27.39■■□□□ 1.98
USP25-203ENST00000351097 GPR101Q96P66 508 aaPredicted RBP27.39■■□□□ 1.98
USP25-203ENST00000351097 CHD4Q14839 1912 aa27.39■■□□□ 1.97
USP25-203ENST00000351097 BECN2A8MW95 431 aa27.39■■□□□ 1.97
USP25-203ENST00000351097 YEATS4O95619 227 aa27.39■■□□□ 1.97
USP25-203ENST00000351097 RXRBP28702 533 aa27.39■■□□□ 1.97
USP25-203ENST00000351097 STK38Q15208 465 aa27.39■■□□□ 1.97
USP25-203ENST00000351097 POLR3EQ9NVU0 708 aa27.39■■□□□ 1.97
USP25-203ENST00000351097 BBOX1O75936 387 aa27.38■■□□□ 1.97
USP25-203ENST00000351097 TMEM67Q5HYA8 995 aa27.38■■□□□ 1.97
USP25-203ENST00000351097 APOA5Q6Q788 366 aa27.38■■□□□ 1.97
USP25-203ENST00000351097 SGMS1Q86VZ5 419 aa27.38■■□□□ 1.97
USP25-203ENST00000351097 BRIP1Q9BX63 1249 aa27.38■■□□□ 1.97
USP25-203ENST00000351097 ANAPC4Q9UJX5 808 aa27.38■■□□□ 1.97
USP25-203ENST00000351097 SF3A1Q15459 793 aaKnown RBP27.38■■□□□ 1.97
USP25-203ENST00000351097 LIFRP42702 1097 aa27.37■■□□□ 1.97
USP25-203ENST00000351097 DHX40Q8IX18 779 aaKnown RBP27.37■■□□□ 1.97
USP25-203ENST00000351097 CEP57L1Q8IYX8 460 aa27.37■■□□□ 1.97
USP25-203ENST00000351097 CRAMP1Q96RY5 1269 aa27.37■■□□□ 1.97
USP25-203ENST00000351097 RNF41Q9H4P4 317 aaPredicted RBP27.37■■□□□ 1.97
USP25-203ENST00000351097 CLIC4Q9Y696 253 aa27.37■■□□□ 1.97
USP25-203ENST00000351097 MINDY4BA8MYZ0 360 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 POLR3DP05423 398 aaPredicted RBP27.36■■□□□ 1.97
USP25-203ENST00000351097 RRP12Q5JTH9 1297 aaKnown RBP27.36■■□□□ 1.97
USP25-203ENST00000351097 MYSM1Q5VVJ2 828 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 ZNF804AQ7Z570 1209 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 STK11IPQ8N1F8 1099 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 NLGN1Q8N2Q7 840 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 RGS22Q8NE09 1264 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 SMIM22K7EJ46 135 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 IFIT3O14879 490 aaKnown RBP27.36■■□□□ 1.97
USP25-203ENST00000351097 CCDC144BQ3MJ40 725 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 TMED8Q6PL24 325 aaPredicted RBP27.36■■□□□ 1.97
USP25-203ENST00000351097 CCDC144CPQ8IYA2 1237 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 NAT10Q9H0A0 1025 aaKnown RBP27.36■■□□□ 1.97
USP25-203ENST00000351097 TOMM22Q9NS69 142 aa27.36■■□□□ 1.97
USP25-203ENST00000351097 AATFQ9NY61 560 aaKnown RBP eCLIP27.36■■□□□ 1.97
USP25-203ENST00000351097 UFL1O94874 794 aa27.35■■□□□ 1.97
USP25-203ENST00000351097 ATP2B4P23634 1241 aa27.35■■□□□ 1.97
USP25-203ENST00000351097 METAP2P50579 478 aaKnown RBP eCLIP27.35■■□□□ 1.97
USP25-203ENST00000351097 CACTINQ8WUQ7 758 aaKnown RBP27.35■■□□□ 1.97
USP25-203ENST00000351097 SDF4Q9BRK5 362 aa27.35■■□□□ 1.97
USP25-203ENST00000351097 MAST2Q6P0Q8 1798 aa27.35■■□□□ 1.97
USP25-203ENST00000351097 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.35■■□□□ 1.97
USP25-203ENST00000351097 A0A1B0GVL5 298 aa27.35■■□□□ 1.97
USP25-203ENST00000351097 NDUFA8P51970 172 aa27.35■■□□□ 1.97
USP25-203ENST00000351097 SPTY2D1Q68D10 685 aaPredicted RBP27.35■■□□□ 1.97
USP25-203ENST00000351097 WDR66Q8TBY9 1149 aa27.35■■□□□ 1.97
USP25-203ENST00000351097 SPTLC2O15270 562 aa27.34■■□□□ 1.97
USP25-203ENST00000351097 RXRAP19793 462 aa27.34■■□□□ 1.97
USP25-203ENST00000351097 NFXL1Q6ZNB6 911 aa27.34■■□□□ 1.97
USP25-203ENST00000351097 TSC1Q92574 1164 aa27.34■■□□□ 1.97
USP25-203ENST00000351097 GGA1Q9UJY5 639 aa27.34■■□□□ 1.97
USP25-203ENST00000351097 MICU3Q86XE3 530 aa27.33■■□□□ 1.97
USP25-203ENST00000351097 PODXL2Q9NZ53 605 aa27.33■■□□□ 1.97
USP25-203ENST00000351097 RIOK3O14730 519 aaKnown RBP27.33■■□□□ 1.97
USP25-203ENST00000351097 ZBTB43O43298 467 aa27.33■■□□□ 1.97
USP25-203ENST00000351097 KIF23Q02241 960 aaPredicted RBP27.33■■□□□ 1.97
USP25-203ENST00000351097 SYNE3Q6ZMZ3 975 aa27.33■■□□□ 1.97
USP25-203ENST00000351097 DZIP1Q86YF9 867 aaKnown RBP27.33■■□□□ 1.97
USP25-203ENST00000351097 A0A087WWV3 80 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 CYP2D7A0A087X1C5 515 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 NEMFO60524 1076 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 CDC27P30260 824 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 ZKSCAN3Q9BRR0 538 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 CTR9Q6PD62 1173 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 ZNF710Q8N1W2 664 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 MTA3Q9BTC8 594 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 CRNKL1Q9BZJ0 848 aaKnown RBP27.32■■□□□ 1.96
USP25-203ENST00000351097 GJB4Q9NTQ9 266 aa27.32■■□□□ 1.96
USP25-203ENST00000351097 KIF28PB7ZC32 967 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 MYL10Q9BUA6 226 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 CD209Q9NNX6 404 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 POLLQ9UGP5 575 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 SLC12A7Q9Y666 1083 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 IGSF3O75054 1194 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 LDHBP07195 334 aaKnown RBP27.31■■□□□ 1.96
USP25-203ENST00000351097 ANO1Q5XXA6 986 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 LRRC8AQ8IWT6 810 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 AOPEPQ8N6M6 819 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 FLAD1Q8NFF5 587 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 ERCC4Q92889 916 aaPredicted RBP27.31■■□□□ 1.96
USP25-203ENST00000351097 DCP1AQ9NPI6 582 aaPredicted RBP27.31■■□□□ 1.96
USP25-203ENST00000351097 FAM217BQ9NTX9 383 aaPredicted RBP27.31■■□□□ 1.96
USP25-203ENST00000351097 KIAA1468Q9P260 1216 aa27.31■■□□□ 1.96
USP25-203ENST00000351097 ANKRD31Q8N7Z5 1873 aa27.3■■□□□ 1.96
USP25-203ENST00000351097 NRXN2Q9P2S2 1712 aa27.3■■□□□ 1.96
USP25-203ENST00000351097 CCDC69A6NI79 296 aa27.3■■□□□ 1.96
USP25-203ENST00000351097 CDKL5O76039 1030 aa27.3■■□□□ 1.96
USP25-203ENST00000351097 SART3Q15020 963 aaKnown RBP27.3■■□□□ 1.96
USP25-203ENST00000351097 GRIK5Q16478 980 aa27.3■■□□□ 1.96
USP25-203ENST00000351097 TBC1D16Q8TBP0 767 aa27.3■■□□□ 1.96
USP25-203ENST00000351097 CCDC88AQ3V6T2 1871 aa27.3■■□□□ 1.96
USP25-203ENST00000351097 USP17L12C9JPN9 530 aa27.29■■□□□ 1.96
USP25-203ENST00000351097 USP17L21D6R901 530 aa27.29■■□□□ 1.96
USP25-203ENST00000351097 BAZ2AQ9UIF9 1905 aaKnown RBP27.29■■□□□ 1.96
USP25-203ENST00000351097 GOLGA8AA7E2F4 631 aa27.29■■□□□ 1.96
USP25-203ENST00000351097 WTAPQ15007 396 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms