RNA–Protein interactions for RNA: ENST00000350592.7

C1orf43-201, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-201ENST00000350592 SENP2Q9HC62 589 aa19.36■□□□□ 0.69
C1orf43-201ENST00000350592 SLC12A7Q9Y666 1083 aa19.36■□□□□ 0.69
C1orf43-201ENST00000350592 ZNF646O15015 1829 aaPredicted RBP19.36■□□□□ 0.69
C1orf43-201ENST00000350592 NID2Q14112 1375 aa19.35■□□□□ 0.69
C1orf43-201ENST00000350592 RANBP6O60518 1105 aaKnown RBP19.35■□□□□ 0.69
C1orf43-201ENST00000350592 POLR3DP05423 398 aaPredicted RBP19.35■□□□□ 0.69
C1orf43-201ENST00000350592 SEC23AQ15436 765 aa19.35■□□□□ 0.69
C1orf43-201ENST00000350592 MCTP1Q6DN14 999 aa19.35■□□□□ 0.69
C1orf43-201ENST00000350592 IQCA1Q86XH1 822 aa19.35■□□□□ 0.69
C1orf43-201ENST00000350592 ZSCAN10Q96SZ4 725 aaPredicted RBP19.35■□□□□ 0.69
C1orf43-201ENST00000350592 ZKSCAN3Q9BRR0 538 aa19.35■□□□□ 0.69
C1orf43-201ENST00000350592 CD2APQ9Y5K6 639 aa19.35■□□□□ 0.69
C1orf43-201ENST00000350592 CDK5RAP2Q96SN8 1893 aa19.35■□□□□ 0.69
C1orf43-201ENST00000350592 TNKSO95271 1327 aa19.34■□□□□ 0.69
C1orf43-201ENST00000350592 VPS37CA5D8V6 355 aaPredicted RBP19.34■□□□□ 0.69
C1orf43-201ENST00000350592 PRDM1O75626 825 aa19.34■□□□□ 0.69
C1orf43-201ENST00000350592 SCNN1DP51172 638 aa19.34■□□□□ 0.69
C1orf43-201ENST00000350592 EVX2Q03828 476 aa19.34■□□□□ 0.69
C1orf43-201ENST00000350592 DALRD3Q5D0E6 543 aaKnown RBP19.34■□□□□ 0.69
C1orf43-201ENST00000350592 DDX60LQ5H9U9 1706 aaKnown RBP19.34■□□□□ 0.69
C1orf43-201ENST00000350592 DDX11Q96FC9 970 aa19.34■□□□□ 0.69
C1orf43-201ENST00000350592 ZDHHC15Q96MV8 337 aa19.34■□□□□ 0.69
C1orf43-201ENST00000350592 SCN9AQ15858 1988 aa19.33■□□□□ 0.69
C1orf43-201ENST00000350592 YDJCA8MPS7 323 aa19.33■□□□□ 0.69
C1orf43-201ENST00000350592 CPLX1O14810 134 aa19.33■□□□□ 0.69
C1orf43-201ENST00000350592 CRKP46108 304 aa19.33■□□□□ 0.69
C1orf43-201ENST00000350592 ZNF287Q9HBT7 754 aa19.33■□□□□ 0.69
C1orf43-201ENST00000350592 FOCADQ5VW36 1801 aa19.33■□□□□ 0.68
C1orf43-201ENST00000350592 GOLGA8AA7E2F4 631 aa19.33■□□□□ 0.68
C1orf43-201ENST00000350592 CDKL5O76039 1030 aa19.33■□□□□ 0.68
C1orf43-201ENST00000350592 SKOR2Q2VWA4 1001 aaPredicted RBP19.33■□□□□ 0.68
C1orf43-201ENST00000350592 APOBEC3HQ6NTF7 200 aaKnown RBP19.33■□□□□ 0.68
C1orf43-201ENST00000350592 CPLX2Q6PUV4 134 aaKnown RBP19.33■□□□□ 0.68
C1orf43-201ENST00000350592 USP40Q9NVE5 1235 aa19.33■□□□□ 0.68
C1orf43-201ENST00000350592 TRAK2O60296 914 aa19.32■□□□□ 0.68
C1orf43-201ENST00000350592 MICU3Q86XE3 530 aa19.32■□□□□ 0.68
C1orf43-201ENST00000350592 RAB11FIP4Q86YS3 637 aa19.32■□□□□ 0.68
C1orf43-201ENST00000350592 KIAA0825Q8IV33 1275 aa19.32■□□□□ 0.68
C1orf43-201ENST00000350592 LARGE2Q8N3Y3 721 aa19.32■□□□□ 0.68
C1orf43-201ENST00000350592 ENAHQ8N8S7 591 aaPredicted RBP19.32■□□□□ 0.68
C1orf43-201ENST00000350592 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
C1orf43-201ENST00000350592 SERPINA10Q9UK55 444 aa19.32■□□□□ 0.68
C1orf43-201ENST00000350592 PTGER2P43116 358 aa19.31■□□□□ 0.68
C1orf43-201ENST00000350592 PLCD1P51178 756 aa19.31■□□□□ 0.68
C1orf43-201ENST00000350592 CDC37L1Q7L3B6 337 aa19.31■□□□□ 0.68
C1orf43-201ENST00000350592 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
C1orf43-201ENST00000350592 DYNLL2Q96FJ2 89 aa19.31■□□□□ 0.68
C1orf43-201ENST00000350592 ZNF277Q9NRM2 450 aaPredicted RBP19.31■□□□□ 0.68
C1orf43-201ENST00000350592 MYO3BQ8WXR4 1341 aa19.31■□□□□ 0.68
C1orf43-201ENST00000350592 TSPY2A6NKD2 308 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 WDHD1O75717 1129 aaPredicted RBP19.3■□□□□ 0.68
C1orf43-201ENST00000350592 FDPSP14324 419 aaKnown RBP19.3■□□□□ 0.68
C1orf43-201ENST00000350592 PPP2R5BQ15173 497 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 CCDC178Q5BJE1 867 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 IFIT1BQ5T764 474 aaKnown RBP19.3■□□□□ 0.68
C1orf43-201ENST00000350592 CDC42EP5Q6NZY7 148 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 C16orf86Q6ZW13 317 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 ZNF654Q8IZM8 581 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 MKNK2Q9HBH9 465 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 FAM217BQ9NTX9 383 aaPredicted RBP19.3■□□□□ 0.68
C1orf43-201ENST00000350592 LMBRD1Q9NUN5 540 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 PSME4Q14997 1843 aa19.3■□□□□ 0.68
C1orf43-201ENST00000350592 BRCA1P38398 1863 aaKnown RBP19.3■□□□□ 0.68
C1orf43-201ENST00000350592 PSDA5PKW4 1024 aaPredicted RBP19.29■□□□□ 0.68
C1orf43-201ENST00000350592 H3BQV1 296 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 CDC27P30260 824 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 ADD1P35611 737 aaKnown RBP19.29■□□□□ 0.68
C1orf43-201ENST00000350592 SLC4A8Q2Y0W8 1093 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 MYL10Q9BUA6 226 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 ORC3Q9UBD5 711 aaPredicted RBP19.29■□□□□ 0.68
C1orf43-201ENST00000350592 PPP1R1BQ9UD71 204 aaPredicted RBP19.29■□□□□ 0.68
C1orf43-201ENST00000350592 CCDC196A0A1B0GTZ2 297 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 RXRAP19793 462 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 FAM47AQ5JRC9 791 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 TTC6Q86TZ1 520 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
C1orf43-201ENST00000350592 TCP11L1Q9NUJ3 509 aa19.29■□□□□ 0.68
C1orf43-201ENST00000350592 VIL1P09327 827 aaKnown RBP19.28■□□□□ 0.68
C1orf43-201ENST00000350592 CALM1P0DP23 149 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 CALM2P0DP24 149 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 CALM3P0DP25 149 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 IARSP41252 1262 aaKnown RBP19.28■□□□□ 0.68
C1orf43-201ENST00000350592 TFAP4Q01664 338 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 PICALMQ13492 652 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 NTRK3Q16288 839 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 RTN1Q16799 776 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
C1orf43-201ENST00000350592 CATIPQ7Z7H3 387 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 NIM1KQ8IY84 436 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 CHAMP1Q96JM3 812 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
C1orf43-201ENST00000350592 DDX4Q9NQI0 724 aaKnown RBP19.28■□□□□ 0.68
C1orf43-201ENST00000350592 ZNRF3Q9ULT6 936 aa19.28■□□□□ 0.68
C1orf43-201ENST00000350592 MYH1P12882 1939 aa19.27■□□□□ 0.68
C1orf43-201ENST00000350592 PRPF40AO75400 957 aaKnown RBP19.27■□□□□ 0.68
C1orf43-201ENST00000350592 DDAH1O94760 285 aa19.27■□□□□ 0.68
C1orf43-201ENST00000350592 CDK8P49336 464 aa19.27■□□□□ 0.68
C1orf43-201ENST00000350592 DGKHQ86XP1 1220 aa19.27■□□□□ 0.68
C1orf43-201ENST00000350592 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms