RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 PDXDC1Q6P996 788 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 MCM10Q7L590 875 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 CCDC125Q86Z20 511 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 TRIM58Q8NG06 486 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 KRT12Q99456 494 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 KLF18A0A0U1RQI7 1052 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 FRMD3A2A2Y4 597 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 KRT79Q5XKE5 535 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 ZGPATQ8N5A5 531 aaKnown RBP9.24□□□□□ -0.93
MCPH1-201ENST00000344683 CCDC51Q96ER9 411 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 LDHCP07864 332 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 KRT5P13647 590 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 LIG3P49916 1009 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 SH3GL3Q99963 347 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 Q6ZUG5 572 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 SAAL1Q96ER3 474 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 PPP1R1BQ9UD71 204 aaPredicted RBP9.24□□□□□ -0.93
MCPH1-201ENST00000344683 NSD3Q9BZ95 1437 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 B4DLN1 442 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 MRPL12P52815 198 aaKnown RBP9.24□□□□□ -0.93
MCPH1-201ENST00000344683 CDR2Q01850 454 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 MMEL1Q495T6 779 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 NUDCD3Q8IVD9 361 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 TRIM42Q8IWZ5 723 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 CCDC138Q96M89 665 aa9.24□□□□□ -0.93
MCPH1-201ENST00000344683 GRIN2BQ13224 1484 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 A0A087WUV0 522 aaPredicted RBP9.23□□□□□ -0.93
MCPH1-201ENST00000344683 CCT6AP40227 531 aaKnown RBP9.23□□□□□ -0.93
MCPH1-201ENST00000344683 PLCD1P51178 756 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 PPP2R5AQ15172 486 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 RPS6KA1Q15418 735 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 RSBN1LQ6PCB5 846 aaPredicted RBP9.23□□□□□ -0.93
MCPH1-201ENST00000344683 SSH1Q8WYL5 1049 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 TSPY3P0CV98 308 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 TSPY8P0CW00 308 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 GNA11P29992 359 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 RAPGEF1Q13905 1077 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DCAF17Q5H9S7 520 aaPredicted RBP9.23□□□□□ -0.93
MCPH1-201ENST00000344683 BCL2L12Q9HB09 334 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 JRKLQ9Y4A0 524 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 ANGPTL3Q9Y5C1 460 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 A0A1B0GW55 424 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DUX4L2P0CJ85 424 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DUX4L3P0CJ86 424 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DUX4L4P0CJ87 422 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DUX4L5P0CJ88 424 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DUX4L6P0CJ89 424 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DUX4L7P0CJ90 424 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 MAP7D3Q8IWC1 876 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 CCDC105Q8IYK2 499 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 TMCO5AQ8N6Q1 288 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 DUX4Q9UBX2 424 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 BCRP11274 1271 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 MCMDC2Q4G0Z9 681 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 MGARPQ8TDB4 240 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 RUSC2Q8N2Y8 1516 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 CCDC159P0C7I6 412 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 NMIQ13287 307 aaPredicted RBP9.23□□□□□ -0.93
MCPH1-201ENST00000344683 RRP36Q96EU6 259 aaKnown RBP9.23□□□□□ -0.93
MCPH1-201ENST00000344683 GNAT2P19087 354 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 SV2BQ7L1I2 683 aa9.23□□□□□ -0.93
MCPH1-201ENST00000344683 NCOA2Q15596 1464 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 POLR3CQ9BUI4 534 aaPredicted RBP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 AMOTL2Q9Y2J4 779 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 CC2D2AQ9P2K1 1620 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 SPDYE3A6NKU9 549 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 SART1O43290 800 aaKnown RBP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 POLE2P56282 527 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 TBC1D8BQ0IIM8 1120 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 TMTC3Q6ZXV5 915 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 LRRC8CQ8TDW0 803 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 ATP6V0A1Q93050 837 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 CDK19Q9BWU1 502 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 CABP5Q9NP86 173 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 IL9RQ01113 521 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 PEX26Q7Z412 305 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 CCDC169A6NNP5 214 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 DAPK3O43293 454 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 ZNF500O60304 480 aaPredicted RBP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 OCA2Q04671 838 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 JPH2Q9BR39 696 aaPredicted RBP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 CNOT10Q9H9A5 744 aaKnown RBP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 FAM69CQ0P6D2 419 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 NUTM2GQ5VZR2 741 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 ZNF449Q6P9G9 518 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 SND1Q7KZF4 910 aaKnown RBP eCLIP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 PALM2Q8IXS6 379 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 TRIM15Q9C019 465 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 COPG1Q9Y678 874 aaKnown RBP9.22□□□□□ -0.93
MCPH1-201ENST00000344683 GNA14O95837 355 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 NXNQ6DKJ4 435 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 MCF2L2Q86YR7 1114 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 MLKLQ8NB16 471 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 BBOF1Q8ND07 529 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 NSMCE1Q8WV22 266 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 MAD1L1Q9Y6D9 718 aa9.22□□□□□ -0.93
MCPH1-201ENST00000344683 HGSO14964 777 aaPredicted RBP9.21□□□□□ -0.93
MCPH1-201ENST00000344683 UQCRFS1P1P0C7P4 283 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms