RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PICALMQ13492 652 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 RALYLQ86SE5 291 aaKnown RBP17.33■□□□□ 0.36
CXCL12-201ENST00000343575 IDI2Q9BXS1 227 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 TDRD3Q9H7E2 651 aaKnown RBP17.33■□□□□ 0.36
CXCL12-201ENST00000343575 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.36
CXCL12-201ENST00000343575 WDR19Q8NEZ3 1342 aa17.32■□□□□ 0.36
CXCL12-201ENST00000343575 PRDM1O75626 825 aa17.32■□□□□ 0.36
CXCL12-201ENST00000343575 DDIT3P35638 169 aa17.32■□□□□ 0.36
CXCL12-201ENST00000343575 TRDNQ13061 729 aa17.32■□□□□ 0.36
CXCL12-201ENST00000343575 MTMR14Q8NCE2 650 aa17.32■□□□□ 0.36
CXCL12-201ENST00000343575 BRF1Q92994 677 aa17.32■□□□□ 0.36
CXCL12-201ENST00000343575 EGFRP00533 1210 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 IGDCC4Q8TDY8 1250 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 KRT23Q9C075 422 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 RNF41Q9H4P4 317 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-201ENST00000343575 CNNM2Q9H8M5 875 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 SENP2Q9HC62 589 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 ORC4O43929 436 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 GMPSP49915 693 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-201ENST00000343575 EIF6P56537 245 aaKnown RBP17.31■□□□□ 0.36
CXCL12-201ENST00000343575 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-201ENST00000343575 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
CXCL12-201ENST00000343575 SLC44A5Q8NCS7 719 aa17.31■□□□□ 0.36
CXCL12-201ENST00000343575 OSBPL5Q9H0X9 879 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-201ENST00000343575 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
CXCL12-201ENST00000343575 RPS12P25398 132 aaKnown RBP17.3■□□□□ 0.36
CXCL12-201ENST00000343575 EVCP57679 992 aa17.3■□□□□ 0.36
CXCL12-201ENST00000343575 ANKRD1Q15327 319 aa17.3■□□□□ 0.36
CXCL12-201ENST00000343575 SH3BP5LQ7L8J4 393 aa17.3■□□□□ 0.36
CXCL12-201ENST00000343575 DPF2Q92785 391 aa17.3■□□□□ 0.36
CXCL12-201ENST00000343575 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
CXCL12-201ENST00000343575 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
CXCL12-201ENST00000343575 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
CXCL12-201ENST00000343575 APOBRQ0VD83 1088 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 CIZ1Q9ULV3 898 aaPredicted RBP17.29■□□□□ 0.36
CXCL12-201ENST00000343575 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 WNT10BO00744 389 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 SH2B2O14492 632 aaPredicted RBP17.29■□□□□ 0.36
CXCL12-201ENST00000343575 TRAK2O60296 914 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 SLURP2P0DP57 97 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 GABPAQ06546 454 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 TOMM22Q9NS69 142 aa17.29■□□□□ 0.36
CXCL12-201ENST00000343575 DDTLA6NHG4 134 aaPredicted RBP17.28■□□□□ 0.36
CXCL12-201ENST00000343575 TCP10Q12799 353 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 NBPF9Q3BBW0 867 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 NECAB1Q8N987 351 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
CXCL12-201ENST00000343575 ZKSCAN3Q9BRR0 538 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 ZNF70Q9UC06 446 aaPredicted RBP17.28■□□□□ 0.36
CXCL12-201ENST00000343575 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
CXCL12-201ENST00000343575 CLRN2A0PK11 232 aa17.27■□□□□ 0.36
CXCL12-201ENST00000343575 DTNBO60941 627 aa17.27■□□□□ 0.36
CXCL12-201ENST00000343575 CDK8P49336 464 aa17.27■□□□□ 0.36
CXCL12-201ENST00000343575 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-201ENST00000343575 MICALL2Q8IY33 904 aa17.27■□□□□ 0.36
CXCL12-201ENST00000343575 ESR2Q92731 530 aa17.27■□□□□ 0.36
CXCL12-201ENST00000343575 TMEM87BQ96K49 555 aa17.27■□□□□ 0.36
CXCL12-201ENST00000343575 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
CXCL12-201ENST00000343575 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
CXCL12-201ENST00000343575 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.36
CXCL12-201ENST00000343575 RRP9O43818 475 aaKnown RBP17.27■□□□□ 0.35
CXCL12-201ENST00000343575 RASA1P20936 1047 aa17.27■□□□□ 0.35
CXCL12-201ENST00000343575 PDE4BQ07343 736 aa17.27■□□□□ 0.35
CXCL12-201ENST00000343575 SEC23AQ15436 765 aa17.27■□□□□ 0.35
CXCL12-201ENST00000343575 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.35
CXCL12-201ENST00000343575 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.35
CXCL12-201ENST00000343575 INTS4Q96HW7 963 aaKnown RBP17.27■□□□□ 0.35
CXCL12-201ENST00000343575 ANGEL1Q9UNK9 670 aaKnown RBP17.27■□□□□ 0.35
CXCL12-201ENST00000343575 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
CXCL12-201ENST00000343575 SLC3A2P08195 630 aaKnown RBP17.26■□□□□ 0.35
CXCL12-201ENST00000343575 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
CXCL12-201ENST00000343575 FGD1P98174 961 aa17.26■□□□□ 0.35
CXCL12-201ENST00000343575 C9orf131Q5VYM1 1079 aa17.26■□□□□ 0.35
CXCL12-201ENST00000343575 CCDC83Q8IWF9 413 aa17.26■□□□□ 0.35
CXCL12-201ENST00000343575 GPC2Q8N158 579 aa17.26■□□□□ 0.35
CXCL12-201ENST00000343575 HPS5Q9UPZ3 1129 aa17.26■□□□□ 0.35
CXCL12-201ENST00000343575 CNTNAP1P78357 1384 aa17.26■□□□□ 0.35
CXCL12-201ENST00000343575 NMT2O60551 498 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 ENTPD3O75355 529 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 MMP14P50281 582 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 STK3Q13188 491 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 TTC6Q86TZ1 520 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 SGMS1Q86VZ5 419 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 AMOTL1Q8IY63 956 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 ZNF274Q96GC6 653 aaPredicted RBP17.25■□□□□ 0.35
CXCL12-201ENST00000343575 MTA3Q9BTC8 594 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 DNAJC18Q9H819 358 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
CXCL12-201ENST00000343575 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
CXCL12-201ENST00000343575 PFKFB2O60825 505 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 LIFRP42702 1097 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 SCRN1Q12765 414 aa17.24■□□□□ 0.35
CXCL12-201ENST00000343575 GPR162Q16538 588 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms