RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 HERC5Q9UII4 1024 aaKnown RBP15.43■□□□□ 0.06
SRSF3-201ENST00000339436 SLC4A4Q9Y6R1 1079 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
SRSF3-201ENST00000339436 FAM196BA6NMK8 535 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 GNAT2P19087 354 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 MAP3K9P80192 1104 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 GRM1Q13255 1194 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 NMIQ13287 307 aaPredicted RBP15.43■□□□□ 0.06
SRSF3-201ENST00000339436 METTL16Q86W50 562 aaKnown RBP15.43■□□□□ 0.06
SRSF3-201ENST00000339436 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 EHD4Q9H223 541 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 DNAJC18Q9H819 358 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 HELLSQ9NRZ9 838 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 MCM9Q9NXL9 1143 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 ZNF112Q9UJU3 913 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 CSADQ9Y600 493 aa15.43■□□□□ 0.06
SRSF3-201ENST00000339436 PHF20L1A8MW92 1017 aa15.42■□□□□ 0.06
SRSF3-201ENST00000339436 INPP5BP32019 993 aa15.42■□□□□ 0.06
SRSF3-201ENST00000339436 CCDC129Q6ZRS4 1044 aa15.42■□□□□ 0.06
SRSF3-201ENST00000339436 DDRGK1Q96HY6 314 aa15.42■□□□□ 0.06
SRSF3-201ENST00000339436 DIAPH3Q9NSV4 1193 aa15.42■□□□□ 0.06
SRSF3-201ENST00000339436 SNCAIPQ9Y6H5 919 aa15.42■□□□□ 0.06
SRSF3-201ENST00000339436 GSG1L2A8MUP6 293 aa15.41■□□□□ 0.06
SRSF3-201ENST00000339436 HIP1O00291 1037 aa15.41■□□□□ 0.06
SRSF3-201ENST00000339436 NOGQ13253 232 aa15.41■□□□□ 0.06
SRSF3-201ENST00000339436 NOL9Q5SY16 702 aaKnown RBP15.41■□□□□ 0.06
SRSF3-201ENST00000339436 TTC6Q86TZ1 520 aa15.41■□□□□ 0.06
SRSF3-201ENST00000339436 CRACR2BQ8N4Y2 399 aaPredicted RBP15.41■□□□□ 0.06
SRSF3-201ENST00000339436 ZKSCAN4Q969J2 545 aaPredicted RBP15.41■□□□□ 0.06
SRSF3-201ENST00000339436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.41■□□□□ 0.06
SRSF3-201ENST00000339436 EPB41L4AQ9HCS5 686 aaPredicted RBP15.41■□□□□ 0.06
SRSF3-201ENST00000339436 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
SRSF3-201ENST00000339436 GREB1LQ9C091 1923 aaPredicted RBP15.41■□□□□ 0.06
SRSF3-201ENST00000339436 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
SRSF3-201ENST00000339436 PLCD1P51178 756 aa15.4■□□□□ 0.06
SRSF3-201ENST00000339436 MCMDC2Q4G0Z9 681 aa15.4■□□□□ 0.06
SRSF3-201ENST00000339436 BMP2KLQ5H9B9 411 aa15.4■□□□□ 0.06
SRSF3-201ENST00000339436 GIMAP6Q6P9H5 292 aa15.4■□□□□ 0.06
SRSF3-201ENST00000339436 ZNF589Q86UQ0 364 aaPredicted RBP15.4■□□□□ 0.06
SRSF3-201ENST00000339436 FOXP4Q8IVH2 680 aaPredicted RBP15.4■□□□□ 0.06
SRSF3-201ENST00000339436 SLC10A4Q96EP9 437 aa15.4■□□□□ 0.06
SRSF3-201ENST00000339436 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
SRSF3-201ENST00000339436 ELP3Q9H9T3 547 aa15.4■□□□□ 0.06
SRSF3-201ENST00000339436 SPDYE5A6NIY4 337 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 FOXP2O15409 715 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 AOC2O75106 756 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 CYP2D6P10635 497 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 EVX2Q03828 476 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 SPRYD7Q5W111 196 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 JMYQ8N9B5 988 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 TRIM34Q9BYJ4 488 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 ARPP21Q9UBL0 812 aaPredicted RBP15.39■□□□□ 0.05
SRSF3-201ENST00000339436 CCDC171Q6TFL3 1326 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 ROBO3Q96MS0 1386 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 LOC285556D6RIA3 1793 aa15.39■□□□□ 0.05
SRSF3-201ENST00000339436 USP17L12C9JPN9 530 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 USP17L21D6R901 530 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 ZBTB48P10074 688 aaPredicted RBP15.38■□□□□ 0.05
SRSF3-201ENST00000339436 MAP2K2P36507 400 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 GABPAQ06546 454 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
SRSF3-201ENST00000339436 AMOTL1Q8IY63 956 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 SCYL3Q8IZE3 742 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 OPTNQ96CV9 577 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 CYP2D7A0A087X1C5 515 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
SRSF3-201ENST00000339436 CTNND1O60716 968 aaKnown RBP15.38■□□□□ 0.05
SRSF3-201ENST00000339436 APPP05067 770 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 GJA5P36382 358 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 TDO2P48775 406 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 MKRN3Q13064 507 aaKnown RBP15.38■□□□□ 0.05
SRSF3-201ENST00000339436 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
SRSF3-201ENST00000339436 C12orf60Q5U649 245 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 CTR9Q6PD62 1173 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 ERO1BQ86YB8 467 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 OTUD5Q96G74 571 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 ZIC5Q96T25 663 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 NACAP1Q9BZK3 213 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
SRSF3-201ENST00000339436 TAOK2Q9UL54 1235 aa15.38■□□□□ 0.05
SRSF3-201ENST00000339436 RAD50Q92878 1312 aa15.37■□□□□ 0.05
SRSF3-201ENST00000339436 SHMT1P34896 483 aa15.37■□□□□ 0.05
SRSF3-201ENST00000339436 SBK1Q52WX2 424 aa15.37■□□□□ 0.05
SRSF3-201ENST00000339436 IFNL3Q8IZI9 196 aa15.37■□□□□ 0.05
SRSF3-201ENST00000339436 MYH4Q9Y623 1939 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 SMIM22K7EJ46 135 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 CHMLP26374 656 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 CAP2P40123 477 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 MFAP1P55081 439 aaKnown RBP15.36■□□□□ 0.05
SRSF3-201ENST00000339436 PPIL2Q13356 520 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 TATDN1Q6P1N9 297 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 NAPBQ9H115 298 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 IL25Q9H293 177 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 PICK1Q9NRD5 415 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 ZMYM6O95789 1325 aa15.36■□□□□ 0.05
SRSF3-201ENST00000339436 HSPD1P10809 573 aaKnown RBP15.35■□□□□ 0.05
SRSF3-201ENST00000339436 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
SRSF3-201ENST00000339436 PPATQ06203 517 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms