RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 CHMP5Q9NZZ3 219 aa17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ANGEL1Q9UNK9 670 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SBF1O95248 1867 aa17.36■□□□□ 0.37
CDK5RAP3-201ENST00000338399 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-201ENST00000338399 FZD9O00144 591 aa17.36■□□□□ 0.37
CDK5RAP3-201ENST00000338399 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ORC4O43929 436 aa17.36■□□□□ 0.37
CDK5RAP3-201ENST00000338399 TMEM67Q5HYA8 995 aa17.36■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ROBO3Q96MS0 1386 aa17.36■□□□□ 0.37
CDK5RAP3-201ENST00000338399 DLGAP5Q15398 846 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ZNF274Q96GC6 653 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 OSBPL5Q9H0X9 879 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 KLF18A0A0U1RQI7 1052 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 YBX3P16989 372 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 EVCP57679 992 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 IDI2Q9BXS1 227 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 LY9Q9HBG7 655 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SENP2Q9HC62 589 aa17.35■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SPDYE2BA6NHP3 402 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 PFKFB2O60825 505 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 DTNBO60941 627 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SPDYE6P0CI01 402 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 LMNB1P20700 586 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 FAM47AQ5JRC9 791 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 MKNK2Q9HBH9 465 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 CIZ1Q9ULV3 898 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ERICH2A1L162 156 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 CCT2P78371 535 aaKnown RBP17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SCRN1Q12765 414 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 TCP10Q12799 353 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 C16orf86Q6ZW13 317 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 TTC6Q86TZ1 520 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 ZFPM1Q8IX07 1006 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 UBAC1Q9BSL1 405 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 SMC3Q9UQE7 1217 aa17.33■□□□□ 0.37
CDK5RAP3-201ENST00000338399 UTRNP46939 3433 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZNF541Q9H0D2 1346 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 RPS12P25398 132 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 LIFRP42702 1097 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 CDK8P49336 464 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 WTAPQ15007 396 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MTA3Q9BTC8 594 aa17.33■□□□□ 0.36
CDK5RAP3-201ENST00000338399 TSPY2A6NKD2 308 aa17.32■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
CDK5RAP3-201ENST00000338399 IQCA1Q86XH1 822 aa17.32■□□□□ 0.36
CDK5RAP3-201ENST00000338399 RAB11FIP4Q86YS3 637 aa17.32■□□□□ 0.36
CDK5RAP3-201ENST00000338399 TNKSO95271 1327 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MYH8P13535 1937 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 CLRN2A0PK11 232 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 GMPSP49915 693 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 TFAP4Q01664 338 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZNF444Q8N0Y2 327 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MTMR14Q8NCE2 650 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZNF287Q9HBT7 754 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 NCOA5Q9HCD5 579 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 CCDC69A6NI79 296 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 NPM3O75607 178 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 GJB2P29033 226 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SEC23AQ15436 765 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZNF70Q9UC06 446 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 HPS5Q9UPZ3 1129 aa17.31■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 NMT2O60551 498 aa17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 HLA-DOAP06340 250 aa17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 RASA1P20936 1047 aa17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 APOA5Q6Q788 366 aa17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ENAHQ8N8S7 591 aaPredicted RBP17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 DPF2Q92785 391 aa17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
CDK5RAP3-201ENST00000338399 DDTLA6NHG4 134 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 TCP10L2B9ZVM9 353 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ENTPD3O75355 529 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZNF280AP59817 542 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 GABPAQ06546 454 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 PKP1Q13835 747 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SPDYE2Q495Y8 402 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 ZBED3Q96IU2 234 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 DHX36Q9H2U1 1008 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 SIPA1L1O43166 1804 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 WNT10BO00744 389 aa17.29■□□□□ 0.36
CDK5RAP3-201ENST00000338399 TSPY3P0CV98 308 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms