RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ALPK3Q96L96 1907 aa7.84□□□□□ -1.15
USP16-201ENST00000334352 OSBPP22059 807 aa7.84□□□□□ -1.16
USP16-201ENST00000334352 NFIAQ12857 509 aa7.84□□□□□ -1.16
USP16-201ENST00000334352 MAP3K21Q5TCX8 1036 aa7.84□□□□□ -1.16
USP16-201ENST00000334352 GIMAP6Q6P9H5 292 aa7.84□□□□□ -1.16
USP16-201ENST00000334352 MYH8P13535 1937 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 PNMA6EA0A0J9YXQ4 647 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 FRAT2O75474 233 aaPredicted RBP7.83□□□□□ -1.16
USP16-201ENST00000334352 CAP1Q01518 475 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 GABPAQ06546 454 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 CDAN1Q8IWY9 1227 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 ZNF280CQ8ND82 737 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 SHCBP1Q8NEM2 672 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 DDTLA6NHG4 134 aaPredicted RBP7.83□□□□□ -1.16
USP16-201ENST00000334352 ASNSP08243 561 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 INPP5BP32019 993 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 OTUD5Q96G74 571 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 ZBTB40Q9NUA8 1239 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 SWAP70Q9UH65 585 aa7.83□□□□□ -1.16
USP16-201ENST00000334352 HOXC6P09630 235 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 UBXN2AP68543 259 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 SOCS4Q8WXH5 440 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 KIAA1683Q9H0B3 1180 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 GJD2Q9UKL4 321 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 DDX19BQ9UMR2 479 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 PA2G4Q9UQ80 394 aaKnown RBP7.82□□□□□ -1.16
USP16-201ENST00000334352 PTCH2Q9Y6C5 1203 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 FLT1P17948 1338 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 TCRBV5S4A2TA0A5A2 114 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 CYP2E1P05181 493 aaPredicted RBP7.82□□□□□ -1.16
USP16-201ENST00000334352 USP14P54578 494 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 GRM1Q13255 1194 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 ABRAQ8N0Z2 381 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 ZKSCAN4Q969J2 545 aaPredicted RBP7.82□□□□□ -1.16
USP16-201ENST00000334352 SHISA4Q96DD7 197 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 NOL10Q9BSC4 688 aaKnown RBP7.82□□□□□ -1.16
USP16-201ENST00000334352 TMEM106CQ9BVX2 250 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 LTBP2Q14767 1821 aa7.82□□□□□ -1.16
USP16-201ENST00000334352 CAPN15O75808 1086 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 CTGFP29279 349 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 COPB2P35606 906 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 TIMM10P62072 90 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 DIXDC1Q155Q3 683 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 MORN1Q5T089 497 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 ZFPM1Q8IX07 1006 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 TANGO6Q9C0B7 1094 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 PLIN4Q96Q06 1357 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 HMMRO75330 724 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 ATP5JP18859 108 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 MAPK4P31152 587 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 BACE1P56817 501 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 NKX3-2P78367 333 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 NAA16Q6N069 864 aaPredicted RBP7.81□□□□□ -1.16
USP16-201ENST00000334352 KIF1BPQ96EK5 621 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 RIOK1Q9BRS2 568 aaKnown RBP7.81□□□□□ -1.16
USP16-201ENST00000334352 LRRC37A2A6NM11 1700 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 TTC39AQ5SRH9 613 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 CNKSR2Q8WXI2 1034 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.81□□□□□ -1.16
USP16-201ENST00000334352 ADAMTS5Q9UNA0 930 aa7.81□□□□□ -1.16
USP16-201ENST00000334352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.81□□□□□ -1.16
USP16-201ENST00000334352 BCAR3O75815 825 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 GRK4P32298 578 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 UBE3CQ15386 1083 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 SLC9C1Q4G0N8 1177 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 SBK1Q52WX2 424 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 DBNLQ9UJU6 430 aaKnown RBP7.8□□□□□ -1.16
USP16-201ENST00000334352 OGDHLQ9ULD0 1010 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 C1orf53Q5VUE5 145 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 OLFML2BQ68BL8 750 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 TTC6Q86TZ1 520 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 TEX11Q8IYF3 940 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 MB21D1Q8N884 522 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.8□□□□□ -1.16
USP16-201ENST00000334352 HTATIP2Q9BUP3 242 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 ATP8A2Q9NTI2 1148 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 RABGAP1Q9Y3P9 1069 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 SALL2Q9Y467 1007 aaPredicted RBP7.8□□□□□ -1.16
USP16-201ENST00000334352 LAMA4Q16363 1823 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 AK9Q5TCS8 1911 aa7.8□□□□□ -1.16
USP16-201ENST00000334352 GOLGB1Q14789 3259 aaKnown RBP7.79□□□□□ -1.16
USP16-201ENST00000334352 POTEFA5A3E0 1075 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 SGPL1O95470 568 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 HLA-DOAP06340 250 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 PSMC4P43686 418 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 MSL3Q8N5Y2 521 aaKnown RBP7.79□□□□□ -1.16
USP16-201ENST00000334352 HAUS7Q99871 368 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 DNAJC18Q9H819 358 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 SLC15A5A6NIM6 579 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 SOX10P56693 466 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 MAP3K12Q12852 859 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 SH3RF3Q8TEJ3 882 aaPredicted RBP7.79□□□□□ -1.16
USP16-201ENST00000334352 EAF2Q96CJ1 260 aaPredicted RBP7.79□□□□□ -1.16
USP16-201ENST00000334352 CCDC17Q96LX7 622 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 PIH1D3Q9NQM4 214 aaKnown RBP7.79□□□□□ -1.16
USP16-201ENST00000334352 DIS3Q9Y2L1 958 aaKnown RBP7.79□□□□□ -1.16
USP16-201ENST00000334352 ZHX2Q9Y6X8 837 aa7.79□□□□□ -1.16
USP16-201ENST00000334352 HMGCRP04035 888 aa7.78□□□□□ -1.16
USP16-201ENST00000334352 CCL5P13501 91 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms