RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 CHMP4CQ96CF2 233 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
C11orf54-201ENST00000331239 BAZ2AQ9UIF9 1905 aaKnown RBP11.21□□□□□ -0.61
C11orf54-201ENST00000331239 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.61
C11orf54-201ENST00000331239 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
C11orf54-201ENST00000331239 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
C11orf54-201ENST00000331239 HERC5Q9UII4 1024 aaKnown RBP11.21□□□□□ -0.61
C11orf54-201ENST00000331239 PRKAB2O43741 272 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 PDIA4P13667 645 aaKnown RBP11.2□□□□□ -0.62
C11orf54-201ENST00000331239 PTMSP20962 102 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 ANKRD1Q15327 319 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 MFSD6Q6ZSS7 791 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 NCOA7Q8NI08 942 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 ADAMTSL1Q8N6G6 1762 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 USP17L12C9JPN9 530 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 USP17L21D6R901 530 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 DDNO94850 711 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-201ENST00000331239 POLR3DP05423 398 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-201ENST00000331239 C16orf86Q6ZW13 317 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 CCDC17Q96LX7 622 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
C11orf54-201ENST00000331239 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 SDR42E1Q8WUS8 393 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
C11orf54-201ENST00000331239 TCP11L1Q9NUJ3 509 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
C11orf54-201ENST00000331239 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 E7EWF7 191 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 ST18O60284 1047 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 GABPAQ06546 454 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 DHX32Q7L7V1 743 aaKnown RBP11.19□□□□□ -0.62
C11orf54-201ENST00000331239 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 SYNPO2Q9UMS6 1093 aa11.19□□□□□ -0.62
C11orf54-201ENST00000331239 RCAN1P53805 252 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 RUFY3Q7L099 469 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 MAPKAPK5Q8IW41 473 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 ESR2Q92731 530 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 SERPINB13Q9UIV8 391 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
C11orf54-201ENST00000331239 PLIN4Q96Q06 1357 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 XRCC6P12956 609 aaKnown RBP eCLIP11.18□□□□□ -0.62
C11orf54-201ENST00000331239 VEGFAP15692 232 aaPredicted RBP11.18□□□□□ -0.62
C11orf54-201ENST00000331239 MCM5P33992 734 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 EPHX2P34913 555 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 BLOC1S2Q6QNY1 142 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 RALYLQ86SE5 291 aaKnown RBP11.18□□□□□ -0.62
C11orf54-201ENST00000331239 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 AGXT2Q9BYV1 514 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 CNTNAP1P78357 1384 aa11.18□□□□□ -0.62
C11orf54-201ENST00000331239 EPS15P42566 896 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 EXOSC10Q01780 885 aaKnown RBP11.17□□□□□ -0.62
C11orf54-201ENST00000331239 TAF1DQ9H5J8 278 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-201ENST00000331239 DDX4Q9NQI0 724 aaKnown RBP11.17□□□□□ -0.62
C11orf54-201ENST00000331239 PALD1Q9ULE6 856 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 MYH8P13535 1937 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 RPS6KB1P23443 525 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 SART3Q15020 963 aaKnown RBP11.17□□□□□ -0.62
C11orf54-201ENST00000331239 SKOR2Q2VWA4 1001 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-201ENST00000331239 NBPF9Q3BBW0 867 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 SUPT20HL1Q3ZLR7 823 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 MB21D2Q8IYB1 491 aaPredicted RBP11.17□□□□□ -0.62
C11orf54-201ENST00000331239 ANKS1AQ92625 1134 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 TTC14Q96N46 770 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
C11orf54-201ENST00000331239 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 MRE11P49959 708 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 EVCP57679 992 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 TATDN1Q6P1N9 297 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 DCPSQ96C86 337 aaKnown RBP11.16□□□□□ -0.62
C11orf54-201ENST00000331239 ZSCAN31Q96LW9 406 aaPredicted RBP11.16□□□□□ -0.62
C11orf54-201ENST00000331239 JAKMIP1Q96N16 626 aaKnown RBP11.16□□□□□ -0.62
C11orf54-201ENST00000331239 LIFRP42702 1097 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 NFIAQ12857 509 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 PPP2R5BQ15173 497 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
C11orf54-201ENST00000331239 SIPA1L1O43166 1804 aa11.16□□□□□ -0.62
C11orf54-201ENST00000331239 GOLGA6L22H0YM25 854 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 NOVP48745 357 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 CDK8P49336 464 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 CLEC17AQ6ZS10 378 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 IQCA1Q86XH1 822 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 TBC1D10CQ8IV04 446 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 ZNF444Q8N0Y2 327 aaPredicted RBP11.15□□□□□ -0.62
C11orf54-201ENST00000331239 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
C11orf54-201ENST00000331239 CASTP20810 708 aaKnown RBP11.15□□□□□ -0.62
C11orf54-201ENST00000331239 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
C11orf54-201ENST00000331239 NEDD1Q8NHV4 660 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 TRPM4Q8TD43 1214 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 TEPSINQ96N21 525 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 DEFB129Q9H1M3 183 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 MKNK2Q9HBH9 465 aa11.15□□□□□ -0.62
C11orf54-201ENST00000331239 POTECB2RU33 542 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms