RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 ARID4AP29374 1257 aaPredicted RBP18.66■□□□□ 0.58
PACS1-201ENST00000320580 CLIC6Q96NY7 704 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 CEP126Q9P2H0 1117 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
PACS1-201ENST00000320580 CACNA2D3Q8IZS8 1091 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.65■□□□□ 0.58
PACS1-201ENST00000320580 IFIT3O14879 490 aaKnown RBP18.65■□□□□ 0.58
PACS1-201ENST00000320580 ERCC3P19447 782 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 RBL2Q08999 1139 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 LINC00301Q8NCQ3 95 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 NSUN7Q8NE18 718 aaKnown RBP18.65■□□□□ 0.58
PACS1-201ENST00000320580 SAMD15Q9P1V8 674 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 MTMR7Q9Y216 660 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 SMIM23A6NLE4 172 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 SCP2P22307 547 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 MYD88Q99836 296 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 CTNND2Q9UQB3 1225 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 KAT14Q9H8E8 782 aa18.65■□□□□ 0.58
PACS1-201ENST00000320580 ZC3H6P61129 1189 aaKnown RBP18.64■□□□□ 0.57
PACS1-201ENST00000320580 IFT20Q8IY31 132 aa18.64■□□□□ 0.57
PACS1-201ENST00000320580 UBLCP1Q8WVY7 318 aaPredicted RBP18.64■□□□□ 0.57
PACS1-201ENST00000320580 VIRMAQ69YN4 1812 aaKnown RBP18.64■□□□□ 0.57
PACS1-201ENST00000320580 IDH1O75874 414 aaKnown RBP18.64■□□□□ 0.57
PACS1-201ENST00000320580 MAPK8IP1Q9UQF2 711 aa18.64■□□□□ 0.57
PACS1-201ENST00000320580 MYO1FO00160 1098 aa18.64■□□□□ 0.57
PACS1-201ENST00000320580 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
PACS1-201ENST00000320580 MTF1Q14872 753 aa18.64■□□□□ 0.57
PACS1-201ENST00000320580 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
PACS1-201ENST00000320580 TCP11Q8WWU5 503 aa18.64■□□□□ 0.57
PACS1-201ENST00000320580 HGSO14964 777 aaPredicted RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 ARHGAP31Q2M1Z3 1444 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 SBNO2Q9Y2G9 1366 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 ZBTB43O43298 467 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 PPP1R12BO60237 982 aaPredicted RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 VIMP08670 466 aaKnown RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 PRR29P0C7W0 189 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 BEND6Q5SZJ8 279 aaPredicted RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 SUGP1Q8IWZ8 645 aaKnown RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 KLC4Q9NSK0 619 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 GPIHBP1Q8IV16 184 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 FMR1NBQ8N0W7 255 aaPredicted RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 SELENOOQ9BVL4 669 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 NSRP1Q9H0G5 558 aaKnown RBP18.63■□□□□ 0.57
PACS1-201ENST00000320580 KIAA0232Q92628 1395 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 ARMC2Q8NEN0 867 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 C19orf44Q9H6X5 657 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 CD248Q9HCU0 757 aa18.63■□□□□ 0.57
PACS1-201ENST00000320580 GRM8O00222 908 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 MRPS25P82663 173 aaKnown RBP18.62■□□□□ 0.57
PACS1-201ENST00000320580 CCDC51Q96ER9 411 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 CCDC6Q16204 474 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 REXO1L1PQ8IX06 675 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 SAMSN1Q9NSI8 373 aaKnown RBP18.62■□□□□ 0.57
PACS1-201ENST00000320580 EPN1Q9Y6I3 576 aaPredicted RBP18.62■□□□□ 0.57
PACS1-201ENST00000320580 GCOM1H8Y6P7 765 aaPredicted RBP18.62■□□□□ 0.57
PACS1-201ENST00000320580 MYZAPP0CAP1 466 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 PAK2Q13177 524 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 TOB2Q14106 344 aaPredicted RBP18.62■□□□□ 0.57
PACS1-201ENST00000320580 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 PPP1R12CQ9BZL4 782 aa18.62■□□□□ 0.57
PACS1-201ENST00000320580 HAUS4Q9H6D7 363 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 TTC21BQ7Z4L5 1316 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 NNTQ13423 1086 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 PLEKHO1Q53GL0 409 aaPredicted RBP18.61■□□□□ 0.57
PACS1-201ENST00000320580 TRIM68Q6AZZ1 485 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 HIBCHQ6NVY1 386 aaPredicted RBP18.61■□□□□ 0.57
PACS1-201ENST00000320580 SPDL1Q96EA4 605 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 SAAL1Q96ER3 474 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 PNKPQ96T60 521 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 NLRP2Q9NX02 1062 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 TRIM14Q14142 442 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 TEX11Q8IYF3 940 aa18.61■□□□□ 0.57
PACS1-201ENST00000320580 CCDC43Q96MW1 224 aaKnown RBP18.61■□□□□ 0.57
PACS1-201ENST00000320580 CCDC85AQ96PX6 553 aaPredicted RBP18.61■□□□□ 0.57
PACS1-201ENST00000320580 ZNF589Q86UQ0 364 aaPredicted RBP18.6■□□□□ 0.57
PACS1-201ENST00000320580 VPS37DQ86XT2 251 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 STAMQ92783 540 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 GLI2P10070 1586 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 IRAK1P51617 712 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 EAF2Q96CJ1 260 aaPredicted RBP18.6■□□□□ 0.57
PACS1-201ENST00000320580 CCDC93Q567U6 631 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 LMNTD2Q8IXW0 634 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 CCDC170Q8IYT3 715 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 POLD4Q9HCU8 107 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 IRAK4Q9NWZ3 460 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 MYOM2P54296 1465 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 PPP1R12AO14974 1030 aaPredicted RBP18.6■□□□□ 0.57
PACS1-201ENST00000320580 NEFHP12036 1026 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 C2orf54Q08AI8 447 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 PRPF4BQ13523 1007 aaKnown RBP18.6■□□□□ 0.57
PACS1-201ENST00000320580 GKAP1Q5VSY0 366 aaPredicted RBP18.6■□□□□ 0.57
PACS1-201ENST00000320580 NAIF1Q69YI7 327 aaPredicted RBP18.6■□□□□ 0.57
PACS1-201ENST00000320580 KRT40Q6A162 431 aa18.6■□□□□ 0.57
PACS1-201ENST00000320580 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
PACS1-201ENST00000320580 EXOC5O00471 708 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms