RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 H3BQF6 201 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 ZSCAN12O43309 604 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 SERPINC1P01008 464 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 SCRN1Q12765 414 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 ZKSCAN8Q15776 578 aaPredicted RBP13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 NUTM1Q86Y26 1132 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 PSD3Q9NYI0 1048 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 FAM169AQ9Y6X4 670 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 UBR3Q6ZT12 1888 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 ERCC3P19447 782 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 CASP7P55210 303 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 MAP9Q49MG5 647 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 ARMC3Q5W041 872 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 KIAA1328Q86T90 577 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 FAM53CQ9NYF3 392 aa13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 G3BP2Q9UN86 482 aaKnown RBP13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
LDLRAD3-201ENST00000315571 CARMIL3Q8ND23 1372 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 A0A087WWV3 80 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 ENO4A6NNW6 628 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 NTSR2O95665 410 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 SYNE4Q8N205 404 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 GBP3Q9H0R5 595 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 CD248Q9HCU0 757 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 SAMM50Q9Y512 469 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 SCN7AQ01118 1682 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 CCDC189A1A4V9 331 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 N4BP1O75113 896 aaKnown RBP13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 ATP2C2O75185 946 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 MSL1Q68DK7 614 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 LMBR1LQ6UX01 489 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 IQCA1Q86XH1 822 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 BCAS4Q8TDM0 211 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 PALD1Q9ULE6 856 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 CDHR2Q9BYE9 1310 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 NUP98P52948 1817 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 PNMA6EA0A0J9YXQ4 647 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 WDHD1O75717 1129 aaPredicted RBP13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 ILDR2Q71H61 639 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 RUFY1Q96T51 708 aa13.3□□□□□ -0.28
LDLRAD3-201ENST00000315571 PLA2G4DQ86XP0 818 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 KAZALD1Q96I82 304 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 GDAP1L1Q96MZ0 367 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 SH3GL3Q99963 347 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 TTC36A6NLP5 189 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 IFNKQ9P0W0 207 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 PDE8AO60658 829 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 AP1G2O75843 785 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 CFAP100Q494V2 611 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 CCDC181Q5TID7 509 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 CEP112Q8N8E3 955 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 MICAL1Q8TDZ2 1067 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
LDLRAD3-201ENST00000315571 KARSQ15046 597 aaKnown RBP13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 ERFEQ4G0M1 354 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 LRRC31Q6UY01 552 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 CHUKO15111 745 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 STX1AQ16623 288 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 ZBTB10Q96DT7 871 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 SCAND2PQ9GZW5 306 aaPredicted RBP13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 SERPINB2P05120 415 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 MTX1Q13505 466 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 RSRC1Q96IZ7 334 aaKnown RBP13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 NBPF3Q9H094 633 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 ANKRD36CQ5JPF3 1778 aa13.28□□□□□ -0.28
LDLRAD3-201ENST00000315571 NDUFAB1O14561 156 aa13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 MAP4K4O95819 1239 aaPredicted RBP13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 GCFC2P16383 781 aaKnown RBP13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 FOXO4P98177 505 aa13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 CCDC24Q8N4L8 307 aa13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 SSH3Q8TE77 659 aa13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 BIN2Q9UBW5 565 aaPredicted RBP13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 PARP3Q9Y6F1 533 aa13.27□□□□□ -0.28
LDLRAD3-201ENST00000315571 BIN1O00499 593 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 ZEB2O60315 1214 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 TADA3O75528 432 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 TUBB4AP04350 444 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 CTSWP56202 376 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 CHMP4BP1P59074 171 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 SPDL1Q96EA4 605 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 PLA2G12BQ9BX93 195 aa13.27□□□□□ -0.29
LDLRAD3-201ENST00000315571 KIF9Q9HAQ2 790 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms