RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ZCCHC17Q9NP64 241 aaKnown RBP20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 PI4KBQ9UBF8 816 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 PALD1Q9ULE6 856 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 DOCK1Q14185 1865 aa20.72■□□□□ 0.91
HMGCLL1-202ENST00000308161 SMARCA5O60264 1052 aaPredicted RBP20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 TLR2O60603 784 aa20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 IGSF3O75054 1194 aa20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 USP5P45974 858 aa20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 TTF1Q15361 905 aaPredicted RBP20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 CRACR2BQ8N4Y2 399 aaPredicted RBP20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 LRRCC1Q9C099 1032 aa20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 DHX36Q9H2U1 1008 aaKnown RBP20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 CPA4Q9UI42 421 aa20.71■□□□□ 0.91
HMGCLL1-202ENST00000308161 CAP1Q01518 475 aa20.7■□□□□ 0.9
HMGCLL1-202ENST00000308161 MOGSQ13724 837 aa20.7■□□□□ 0.9
HMGCLL1-202ENST00000308161 EDC3Q96F86 508 aaKnown RBP20.7■□□□□ 0.9
HMGCLL1-202ENST00000308161 BOLA2Q9H3K6 86 aa20.7■□□□□ 0.9
HMGCLL1-202ENST00000308161 HERC5Q9UII4 1024 aaKnown RBP20.7■□□□□ 0.9
HMGCLL1-202ENST00000308161 AFG3L2Q9Y4W6 797 aa20.7■□□□□ 0.9
HMGCLL1-202ENST00000308161 A0A0G2JLL6 359 aaPredicted RBP20.69■□□□□ 0.9
HMGCLL1-202ENST00000308161 MLLT1Q03111 559 aaPredicted RBP20.69■□□□□ 0.9
HMGCLL1-202ENST00000308161 RRP1BQ14684 758 aaKnown RBP20.69■□□□□ 0.9
HMGCLL1-202ENST00000308161 SLC9C2Q5TAH2 1124 aa20.69■□□□□ 0.9
HMGCLL1-202ENST00000308161 PRRT2Q7Z6L0 340 aaPredicted RBP20.69■□□□□ 0.9
HMGCLL1-202ENST00000308161 CDK5RAP2Q96SN8 1893 aa20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 HLA-DOAP06340 250 aa20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 CYP2C8P10632 490 aa20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 PDE6AP16499 860 aa20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 RRP1P56182 461 aaKnown RBP20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 KIF22Q14807 665 aa20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 FASTKD5Q7L8L6 764 aaKnown RBP20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 PARK7Q99497 189 aaKnown RBP20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 PTPN22Q9Y2R2 807 aa20.68■□□□□ 0.9
HMGCLL1-202ENST00000308161 HTTP42858 3142 aa20.67■□□□□ 0.9
HMGCLL1-202ENST00000308161 MAGEB6P1A0A0J9YX57 407 aa20.67■□□□□ 0.9
HMGCLL1-202ENST00000308161 CAP2P40123 477 aa20.67■□□□□ 0.9
HMGCLL1-202ENST00000308161 ARHGEF6Q15052 776 aa20.67■□□□□ 0.9
HMGCLL1-202ENST00000308161 GPAT2Q6NUI2 795 aa20.67■□□□□ 0.9
HMGCLL1-202ENST00000308161 ARHGAP39Q9C0H5 1083 aa20.67■□□□□ 0.9
HMGCLL1-202ENST00000308161 SPP2Q13103 211 aa20.66■□□□□ 0.9
HMGCLL1-202ENST00000308161 CERS3Q8IU89 383 aa20.66■□□□□ 0.9
HMGCLL1-202ENST00000308161 PAG1Q9NWQ8 432 aa20.66■□□□□ 0.9
HMGCLL1-202ENST00000308161 ZNF532Q9HCE3 1301 aa20.66■□□□□ 0.9
HMGCLL1-202ENST00000308161 SIPA1L1O43166 1804 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 FOCADQ5VW36 1801 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 GDF11O95390 407 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 ATP5JP18859 108 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 RGS19P49795 217 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 LACTBP83111 547 aaPredicted RBP20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 C17orf99Q6UX52 265 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 FOXP4Q8IVH2 680 aaPredicted RBP20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 ZNF280CQ8ND82 737 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 DNAJC18Q9H819 358 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 ATAD5Q96QE3 1844 aa20.65■□□□□ 0.9
HMGCLL1-202ENST00000308161 USP17L5A8MUK1 530 aa20.64■□□□□ 0.89
HMGCLL1-202ENST00000308161 SHROOM1Q2M3G4 852 aaPredicted RBP20.64■□□□□ 0.89
HMGCLL1-202ENST00000308161 RIOK1Q9BRS2 568 aaKnown RBP20.64■□□□□ 0.89
HMGCLL1-202ENST00000308161 ZSWIM8A7E2V4 1837 aa20.64■□□□□ 0.89
HMGCLL1-202ENST00000308161 PHIPQ8WWQ0 1821 aa20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 HMGCS2P54868 508 aa20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 SLFNL1Q499Z3 407 aa20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 TMED8Q6PL24 325 aaPredicted RBP20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 SMCR8Q8TEV9 937 aaPredicted RBP20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 CRNKL1Q9BZJ0 848 aaKnown RBP20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 AS3MTQ9HBK9 375 aa20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 PTCH2Q9Y6C5 1203 aa20.63■□□□□ 0.89
HMGCLL1-202ENST00000308161 CENPFP49454 3210 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 ASNSP08243 561 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 JAG1P78504 1218 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 TREML2Q5T2D2 321 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 HAUS7Q99871 368 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 AGTPBP1Q9UPW5 1226 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 ADGRA2Q96PE1 1338 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 PTPRFP10586 1907 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 MYH1P12882 1939 aa20.62■□□□□ 0.89
HMGCLL1-202ENST00000308161 FMNL1O95466 1100 aaPredicted RBP20.61■□□□□ 0.89
HMGCLL1-202ENST00000308161 POLR3DP05423 398 aaPredicted RBP20.61■□□□□ 0.89
HMGCLL1-202ENST00000308161 PSMC4P43686 418 aa20.61■□□□□ 0.89
HMGCLL1-202ENST00000308161 LCORLQ8N3X6 602 aa20.61■□□□□ 0.89
HMGCLL1-202ENST00000308161 CRBNQ96SW2 442 aa20.61■□□□□ 0.89
HMGCLL1-202ENST00000308161 ARMT1Q9H993 441 aa20.61■□□□□ 0.89
HMGCLL1-202ENST00000308161 TCRBV5S4A2TA0A5A2 114 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 MYCP01106 439 aaPredicted RBP20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 MTMR2Q13614 643 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 SLC9C1Q4G0N8 1177 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 TSHZ3Q63HK5 1081 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 TTC6Q86TZ1 520 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 METTL16Q86W50 562 aaKnown RBP20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 SDR42E1Q8WUS8 393 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 TBC1D2Q9BYX2 928 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 ECHDC1Q9NTX5 307 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 SERPINB13Q9UIV8 391 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 ZBTB21Q9ULJ3 1066 aa20.6■□□□□ 0.89
HMGCLL1-202ENST00000308161 MBD4O95243 580 aa20.59■□□□□ 0.89
HMGCLL1-202ENST00000308161 CHGBP05060 677 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms