RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 SENP2Q9HC62 589 aa28.69■■■□□ 2.18
R3HCC1-201ENST00000265806 SERPINA10Q9UK55 444 aa28.69■■■□□ 2.18
R3HCC1-201ENST00000265806 DHX16O60231 1041 aaKnown RBP28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 JAK2O60674 1132 aa28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 PRDM1O75626 825 aa28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 POLR3DP05423 398 aaPredicted RBP28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 HMGN5P82970 282 aaKnown RBP28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 WTAPQ15007 396 aa28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 TAOK3Q9H2K8 898 aa28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 NCOA5Q9HCD5 579 aaKnown RBP28.68■■■□□ 2.18
R3HCC1-201ENST00000265806 RANBP6O60518 1105 aaKnown RBP28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 SEC23AQ15436 765 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 USP40Q9NVE5 1235 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 ADAMTSL1Q8N6G6 1762 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 WDHD1O75717 1129 aaPredicted RBP28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 BAG4O95429 457 aaKnown RBP28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 VIL1P09327 827 aaKnown RBP28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 CDC42EP5Q6NZY7 148 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 NFXL1Q6ZNB6 911 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 IQCA1Q86XH1 822 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 ZKSCAN3Q9BRR0 538 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 ZNRF3Q9ULT6 936 aa28.67■■■□□ 2.18
R3HCC1-201ENST00000265806 MYH1P12882 1939 aa28.66■■■□□ 2.18
R3HCC1-201ENST00000265806 CCDC69A6NI79 296 aa28.66■■■□□ 2.18
R3HCC1-201ENST00000265806 DTNBO60941 627 aa28.66■■■□□ 2.18
R3HCC1-201ENST00000265806 PLCD1P51178 756 aa28.66■■■□□ 2.18
R3HCC1-201ENST00000265806 LARP1BQ659C4 914 aaKnown RBP28.66■■■□□ 2.18
R3HCC1-201ENST00000265806 NIM1KQ8IY84 436 aa28.66■■■□□ 2.18
R3HCC1-201ENST00000265806 SAP30BPQ9UHR5 308 aaKnown RBP28.66■■■□□ 2.18
R3HCC1-201ENST00000265806 ZSCAN22P10073 491 aaPredicted RBP28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 RSBN1LQ6PCB5 846 aaPredicted RBP28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 ZSCAN10Q96SZ4 725 aaPredicted RBP28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 SLC12A7Q9Y666 1083 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 TNKSO95271 1327 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 NID2Q14112 1375 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 PTPDC1A2A3K4 754 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 ZBTB43O43298 467 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 RCAN1P53805 252 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 SPON1Q9HCB6 807 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 MTMR6Q9Y217 621 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 BCS1LQ9Y276 419 aa28.65■■■□□ 2.18
R3HCC1-201ENST00000265806 DDX11L8A8MPP1 907 aa28.64■■■□□ 2.18
R3HCC1-201ENST00000265806 NFKBIEO00221 500 aa28.64■■■□□ 2.18
R3HCC1-201ENST00000265806 METAP2P50579 478 aaKnown RBP eCLIP28.64■■■□□ 2.18
R3HCC1-201ENST00000265806 SLC4A8Q2Y0W8 1093 aa28.64■■■□□ 2.18
R3HCC1-201ENST00000265806 DYNLL2Q96FJ2 89 aa28.64■■■□□ 2.18
R3HCC1-201ENST00000265806 ZNF287Q9HBT7 754 aa28.64■■■□□ 2.18
R3HCC1-201ENST00000265806 KIF3AQ9Y496 699 aa28.64■■■□□ 2.18
R3HCC1-201ENST00000265806 LTBP3Q9NS15 1303 aa28.64■■■□□ 2.17
R3HCC1-201ENST00000265806 ECM29Q5VYK3 1845 aa28.63■■■□□ 2.17
R3HCC1-201ENST00000265806 PSMD14O00487 310 aa28.63■■■□□ 2.17
R3HCC1-201ENST00000265806 C16orf86Q6ZW13 317 aa28.63■■■□□ 2.17
R3HCC1-201ENST00000265806 ENAHQ8N8S7 591 aaPredicted RBP28.63■■■□□ 2.17
R3HCC1-201ENST00000265806 GMLQ99445 158 aa28.63■■■□□ 2.17
R3HCC1-201ENST00000265806 DDX4Q9NQI0 724 aaKnown RBP28.63■■■□□ 2.17
R3HCC1-201ENST00000265806 SYNE3Q6ZMZ3 975 aa28.62■■■□□ 2.17
R3HCC1-201ENST00000265806 RAD17O75943 681 aa28.62■■■□□ 2.17
R3HCC1-201ENST00000265806 FOXD4L5Q5VV16 416 aaPredicted RBP28.62■■■□□ 2.17
R3HCC1-201ENST00000265806 FOXD4L4Q8WXT5 416 aaPredicted RBP28.62■■■□□ 2.17
R3HCC1-201ENST00000265806 GOLGB1Q14789 3259 aaKnown RBP28.61■■■□□ 2.17
R3HCC1-201ENST00000265806 MICU3Q86XE3 530 aa28.61■■■□□ 2.17
R3HCC1-201ENST00000265806 FAM184AQ8NB25 1140 aa28.61■■■□□ 2.17
R3HCC1-201ENST00000265806 DDX11Q96FC9 970 aa28.61■■■□□ 2.17
R3HCC1-201ENST00000265806 MKNK2Q9HBH9 465 aa28.61■■■□□ 2.17
R3HCC1-201ENST00000265806 TSPY2A6NKD2 308 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 CPLX1O14810 134 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 F13A1P00488 732 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 RBM5P52756 815 aaKnown RBP eCLIP28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 PICALMQ13492 652 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 TTC6Q86TZ1 520 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 RAB11FIP4Q86YS3 637 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 NLGN2Q8NFZ4 835 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 ARFGEF1Q9Y6D6 1849 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 NPM3O75607 178 aaKnown RBP28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 FAM47AQ5JRC9 791 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 IDI2Q9BXS1 227 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 OSBPL5Q9H0X9 879 aaPredicted RBP28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 PCDHAC2Q9Y5I4 1007 aa28.6■■■□□ 2.17
R3HCC1-201ENST00000265806 GOLGA8AA7E2F4 631 aa28.59■■■□□ 2.17
R3HCC1-201ENST00000265806 GOLGA6L22H0YM25 854 aa28.59■■■□□ 2.17
R3HCC1-201ENST00000265806 IFIT1BQ5T764 474 aaKnown RBP28.59■■■□□ 2.17
R3HCC1-201ENST00000265806 ZNF654Q8IZM8 581 aa28.59■■■□□ 2.17
R3HCC1-201ENST00000265806 JDP2Q8WYK2 163 aa28.59■■■□□ 2.17
R3HCC1-201ENST00000265806 FAM217BQ9NTX9 383 aaPredicted RBP28.59■■■□□ 2.17
R3HCC1-201ENST00000265806 VPS37CA5D8V6 355 aaPredicted RBP28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 CDKL5O76039 1030 aa28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 PTMSP20962 102 aa28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 CDK8P49336 464 aa28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 TFAP4Q01664 338 aa28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 CFAP100Q494V2 611 aa28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 CPLX2Q6PUV4 134 aaKnown RBP28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 ZNF444Q8N0Y2 327 aaPredicted RBP28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 AGBL3Q8NEM8 1001 aa28.58■■■□□ 2.17
R3HCC1-201ENST00000265806 FDPSP14324 419 aaKnown RBP28.57■■■□□ 2.16
R3HCC1-201ENST00000265806 RXRAP19793 462 aa28.57■■■□□ 2.16
R3HCC1-201ENST00000265806 RASA1P20936 1047 aa28.57■■■□□ 2.16
R3HCC1-201ENST00000265806 CDC27P30260 824 aa28.57■■■□□ 2.16
R3HCC1-201ENST00000265806 ADD1P35611 737 aaKnown RBP28.57■■■□□ 2.16
R3HCC1-201ENST00000265806 CCDC178Q5BJE1 867 aa28.57■■■□□ 2.16
R3HCC1-201ENST00000265806 SLC44A5Q8NCS7 719 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms