RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 KRBA2Q6ZNG9 492 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 CCDC175P0C221 793 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 PIK3AP1Q6ZUJ8 805 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 TAB2Q9NYJ8 693 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 PODXL2Q9NZ53 605 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 GYG1P46976 350 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 CCZ1BP86790 482 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 CCZ1P86791 482 aaPredicted RBP18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 RABEP2Q9H5N1 569 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 POLR3EQ9NVU0 708 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 ZSCAN20P17040 1043 aaPredicted RBP18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 LEKR1Q6ZMV7 388 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 PPP2R2CQ9Y2T4 447 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 PCDHB6Q9Y5E3 794 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 CUTAO60888 179 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 IRX2Q9BZI1 471 aaPredicted RBP18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 IMPACTQ9P2X3 320 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 COL15A1P39059 1388 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 A0A1W2PQ27 194 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 A0A1W2PQ64 194 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 A0A1W2PQD8 194 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 GUCY1A2P33402 732 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 ZCCHC17Q9NP64 241 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
PDZRN3-201ENST00000263666 DIP2AQ14689 1571 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 CCDC194A0A1B0GVG4 234 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 ZNHIT6Q9NWK9 470 aaKnown RBP18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 ZMYM6O95789 1325 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 MAGEB6P1A0A0J9YX57 407 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 IDEP14735 1019 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 CTSWP56202 376 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 AKNAD1Q5T1N1 836 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 E4F1Q66K89 784 aaPredicted RBP18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 DHX37Q8IY37 1157 aaKnown RBP18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 SETDB2Q96T68 719 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 TFCP2L1Q9NZI6 479 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 ANKRD26Q9UPS8 1709 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 GNPATO15228 680 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 UBA7P41226 1012 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 TMEM87BQ96K49 555 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 TRIM47Q96LD4 638 aa18.4■□□□□ 0.54
PDZRN3-201ENST00000263666 PUM3Q15397 648 aaKnown RBP18.39■□□□□ 0.54
PDZRN3-201ENST00000263666 TSGA10IPQ3SY00 556 aa18.39■□□□□ 0.54
PDZRN3-201ENST00000263666 CDK5RAP3Q96JB5 506 aa18.39■□□□□ 0.54
PDZRN3-201ENST00000263666 NEDD4P46934 1319 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 AKR1B15C9JRZ8 316 aaPredicted RBP18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 CLCN6P51797 869 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 NOM1Q5C9Z4 860 aaKnown RBP18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 DZIP1Q86YF9 867 aaKnown RBP18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 ZNF654Q8IZM8 581 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 LRRN4CLQ8ND94 238 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 SLF1Q9BQI6 1058 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 CNNM2Q9H8M5 875 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 VPS18Q9P253 973 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 ZNF219Q9P2Y4 722 aaPredicted RBP18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 ERLIN1O75477 346 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 CCDC178Q5BJE1 867 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 KCNB2Q92953 911 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 EPSTI1Q96J88 318 aa18.39■□□□□ 0.53
PDZRN3-201ENST00000263666 RABL6Q3YEC7 729 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 CENPHQ9H3R5 247 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 RTCBQ9Y3I0 505 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 VGLL3A8MV65 326 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 PDE8BO95263 885 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 ANTXR2P58335 489 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 GRIN1Q05586 938 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 SHC4Q6S5L8 630 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 USP49Q70CQ1 688 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 LCORLQ8N3X6 602 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 ZBTB38Q8NAP3 1195 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 OXER1Q8TDS5 423 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 PSMB7Q99436 277 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 CSRNP2Q9H175 543 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 PLEKHA4Q9H4M7 779 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 PRR29P0C7W0 189 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 ADD2P35612 726 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 UBXN1Q04323 297 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 SPECC1LQ69YQ0 1117 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 FER1L4A9Z1Z3 1794 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 ARHGAP6O43182 974 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 CDC25BP30305 580 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 STIM1Q13586 685 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 RILPL1Q5EBL4 403 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 CCDC70Q6NSX1 233 aa18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 MB21D2Q8IYB1 491 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-201ENST00000263666 MROH7-TTC4A0A0A0MT08 1334 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 ZBTB22O15209 634 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 MTIF2P46199 727 aaKnown RBP18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 RBM6P78332 1123 aaKnown RBP18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 CDC5LQ99459 802 aaKnown RBP18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 FAM205CA6NFA0 338 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 KRT2P35908 639 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 STAT6P42226 847 aa18.37■□□□□ 0.53
PDZRN3-201ENST00000263666 MTF1Q14872 753 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms