RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 KCNJ14Q9UNX9 436 aa10.1□□□□□ -0.79
CALCOCO2-201ENST00000258947 ATP6V0A2Q9Y487 856 aa10.1□□□□□ -0.79
CALCOCO2-201ENST00000258947 PLCG2P16885 1265 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 MARCKSP29966 332 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 CRACR2BQ8N4Y2 399 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 FANCBQ8NB91 859 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 SLC44A5Q8NCS7 719 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 USP28Q96RU2 1077 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 TCP10Q12799 353 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 KRT40Q6A162 431 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 SASS6Q6UVJ0 657 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 SMARCC2Q8TAQ2 1214 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 IGDCC4Q8TDY8 1250 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 C4BP0C0L5 1744 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 C21orf2O43822 256 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 EIF6P56537 245 aaKnown RBP10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 EVX2Q03828 476 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 CRY2Q49AN0 593 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 LRSAM1Q6UWE0 723 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 TMC4Q7Z404 712 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 FSIP1Q8NA03 581 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 FBXO18Q8NFZ0 1043 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 TUBGCP6Q96RT7 1819 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 VAT1LQ9HCJ6 419 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 BRMS1Q9HCU9 246 aa10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO2-201ENST00000258947 LIFRP42702 1097 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 HPS5Q9UPZ3 1129 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 PPIP5K2O43314 1243 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 RESTQ13127 1097 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 MAP3K11Q16584 847 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 SPEF2Q9C093 1822 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 UBE2Q2LH0YL09 131 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 LIG1P18858 919 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 ENAHQ8N8S7 591 aaPredicted RBP10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 AKT1S1Q96B36 256 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 AGXT2Q9BYV1 514 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 COA1Q9GZY4 146 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 USP40Q9NVE5 1235 aa10.08□□□□□ -0.8
CALCOCO2-201ENST00000258947 NHSQ6T4R5 1651 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 MROH7-TTC4A0A0A0MT08 1334 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 ZBTB7AO95365 584 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 FDPSP14324 419 aaKnown RBP10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 ZNF384Q8TF68 577 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 COL1A1P02452 1464 aaPredicted RBP10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 USP17L3A6NCW0 530 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 USP17L4A6NCW7 530 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 LETM1O95202 739 aaPredicted RBP10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 CCDC192P0DO97 292 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 CACNB3P54284 484 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 USP17L1Q7RTZ2 530 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 RBSNQ9H1K0 784 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 VPS54Q9P1Q0 977 aa10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
CALCOCO2-201ENST00000258947 HOXA10P31260 410 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 KIF5BP33176 963 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 DIS3L2Q8IYB7 885 aaKnown RBP10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 RASSF8Q8NHQ8 419 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 NLRP5P59047 1200 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 AOC3Q16853 763 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 DRC7Q8IY82 874 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 SPTLC2O15270 562 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 DEXIO95424 95 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 HLA-DOAP06340 250 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 MYSM1Q5VVJ2 828 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 SGMS1Q86VZ5 419 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 LARGE2Q8N3Y3 721 aa10.06□□□□□ -0.8
CALCOCO2-201ENST00000258947 A0A1B0GVL5 298 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 BTBD18B2RXH4 712 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 PLCD1P51178 756 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 ZNF445P59923 1031 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 IKQ13123 557 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 BRAPQ7Z569 592 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 GOLGB1Q14789 3259 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 BECN2A8MW95 431 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 PLEKHA8P1O95397 391 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 GOLGA8HP0CJ92 632 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 CALM1P0DP23 149 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 CALM2P0DP24 149 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 CALM3P0DP25 149 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 PNMA1Q8ND90 353 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 CLIC4Q9Y696 253 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 GUCY1A2P33402 732 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 DDX19AQ9NUU7 478 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 TACC3Q9Y6A5 838 aa10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 BAZ2BQ9UIF8 2168 aaKnown RBP10.05□□□□□ -0.8
CALCOCO2-201ENST00000258947 FSD2A1L4K1 749 aa10.04□□□□□ -0.8
CALCOCO2-201ENST00000258947 NR1I2O75469 434 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms