RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 UHRF1BP1Q6BDS2 1440 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 MIER3Q7Z3K6 550 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 RUNDC3BQ96NL0 473 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 C16orf71Q8IYS4 520 aaPredicted RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 SUN1O94901 812 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 STX2P32856 288 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 CDC23Q9UJX2 597 aa9.14□□□□□ -0.95
APOB-201ENST00000233242 ANGEL1Q9UNK9 670 aaKnown RBP9.14□□□□□ -0.95
APOB-201ENST00000233242 SLC27A2O14975 620 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 CEP104O60308 925 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 PLCG2P16885 1265 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.13□□□□□ -0.95
APOB-201ENST00000233242 MAK16Q9BXY0 300 aaKnown RBP9.13□□□□□ -0.95
APOB-201ENST00000233242 MAGEA1P43355 309 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 MAGEA9P43362 315 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 SLC9C2Q5TAH2 1124 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 CCDC197Q8NCU1 140 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 SLC4A4Q9Y6R1 1079 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 SAMM50Q9Y512 469 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 CNGA1P29973 690 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 TMEM110-MUSTN1A8MSY1 372 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 GADD45BO75293 160 aaPredicted RBP9.13□□□□□ -0.95
APOB-201ENST00000233242 SFMBT2Q5VUG0 894 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 PEX26Q7Z412 305 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 CCHCR1Q8TD31 782 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 MPHOSPH6Q99547 160 aaKnown RBP9.13□□□□□ -0.95
APOB-201ENST00000233242 NBPF9Q3BBW0 867 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 SRGAP1Q7Z6B7 1085 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 ANKLE2Q86XL3 938 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 TNFAIP3P21580 790 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 MPRIPQ6WCQ1 1025 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 C8orf58Q8NAV2 365 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 VWA3AA6NCI4 1184 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 SNX14Q9Y5W7 946 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 SMIM24O75264 130 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 PPFIA2O75334 1257 aa9.13□□□□□ -0.95
APOB-201ENST00000233242 DNAJC8O75937 253 aaPredicted RBP9.13□□□□□ -0.95
APOB-201ENST00000233242 GNA14O95837 355 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 MCM7P33993 719 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 CHPF2Q9P2E5 772 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.12□□□□□ -0.95
APOB-201ENST00000233242 CC2D2AQ9P2K1 1620 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 SEPT2Q15019 361 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 ADGRF5Q8IZF2 1346 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 A0A1W2PQ27 194 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 A0A1W2PQ64 194 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 A0A1W2PQD8 194 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 ALS2CLQ60I27 953 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 SLF1Q9BQI6 1058 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 RGS12O14924 1447 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 FBXO41Q8TF61 875 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 PFDN1O60925 122 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 FAM69CQ0P6D2 419 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 DBN1Q16643 649 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 FAM83GA6ND36 823 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 CCDC152Q4G0S7 254 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 CALUO43852 315 aaPredicted RBP9.12□□□□□ -0.95
APOB-201ENST00000233242 CCT5P48643 541 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 TERF2Q15554 542 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 ATP2A3Q93084 1043 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 ZKSCAN3Q9BRR0 538 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 VPS16Q9H269 839 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 RNF14Q9UBS8 474 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 ASIC3Q9UHC3 531 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
APOB-201ENST00000233242 ZPR1O75312 459 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 CYP7A1P22680 504 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 PPANQ9NQ55 473 aaKnown RBP9.12□□□□□ -0.95
APOB-201ENST00000233242 FAF1Q9UNN5 650 aaPredicted RBP9.12□□□□□ -0.95
APOB-201ENST00000233242 STK10O94804 968 aaKnown RBP9.12□□□□□ -0.95
APOB-201ENST00000233242 SNX16P57768 344 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 ITIH3Q06033 890 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 RASIP1Q5U651 963 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 CCDC170Q8IYT3 715 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 FAM204AQ9H8W3 233 aa9.12□□□□□ -0.95
APOB-201ENST00000233242 ARHGEF11O15085 1522 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 HOXB7P09629 217 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 EPHB4P54760 987 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 VAT1LQ9HCJ6 419 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 CLTAP09496 248 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 DDX21Q9NR30 783 aaKnown RBP eCLIP9.11□□□□□ -0.95
APOB-201ENST00000233242 FAM135BQ49AJ0 1406 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 CCDC105Q8IYK2 499 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 TXLNGQ9NUQ3 528 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 NOS1P29475 1434 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 COG7P83436 770 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 TSC1Q92574 1164 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 PPP1R9AQ9ULJ8 1098 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 ITSN2Q9NZM3 1697 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 MGEA5O60502 916 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 HAUS3Q68CZ6 603 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 COL17A1Q9UMD9 1497 aaPredicted RBP9.11□□□□□ -0.95
APOB-201ENST00000233242 CMA1P23946 247 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 NELFBQ8WX92 580 aa9.11□□□□□ -0.95
APOB-201ENST00000233242 MSH6P52701 1360 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms