RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 UBXN4Q92575 508 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.07■□□□□ 0.8
PRPF19-201ENST00000227524 KCNH3Q9ULD8 1083 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 PCDHA5Q9Y5H7 936 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 BTAF1O14981 1849 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 B4E1Z4 1266 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 ZBTB43O43298 467 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 ZSCAN12O43309 604 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 RANBP6O60518 1105 aaKnown RBP20.07■□□□□ 0.8
PRPF19-201ENST00000227524 URI1O94763 535 aaPredicted RBP20.07■□□□□ 0.8
PRPF19-201ENST00000227524 PNMA6AP0CW24 399 aaPredicted RBP20.07■□□□□ 0.8
PRPF19-201ENST00000227524 IARSP41252 1262 aaKnown RBP20.07■□□□□ 0.8
PRPF19-201ENST00000227524 PDE4BQ07343 736 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 TRIM29Q14134 588 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 PTPN21Q16825 1174 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 SLC9C2Q5TAH2 1124 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 MNS1Q8NEH6 495 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 TMEM87BQ96K49 555 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 PARP3Q9Y6F1 533 aa20.07■□□□□ 0.8
PRPF19-201ENST00000227524 VWA3AA6NCI4 1184 aa20.06■□□□□ 0.8
PRPF19-201ENST00000227524 ARHGAP6O43182 974 aa20.06■□□□□ 0.8
PRPF19-201ENST00000227524 METTL24Q5JXM2 366 aa20.06■□□□□ 0.8
PRPF19-201ENST00000227524 ARGLU1Q9NWB6 273 aaPredicted RBP20.06■□□□□ 0.8
PRPF19-201ENST00000227524 GOLGA8AA7E2F4 631 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 CAMTA2O94983 1202 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 ZRANB2O95218 330 aaKnown RBP eCLIP20.05■□□□□ 0.8
PRPF19-201ENST00000227524 BMP6P22004 513 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 FAM182BQ5T319 152 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 CREBRFQ8IUR6 639 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 IGDCC4Q8TDY8 1250 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 LY9Q9HBG7 655 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 FAM217BQ9NTX9 383 aaPredicted RBP20.05■□□□□ 0.8
PRPF19-201ENST00000227524 PPP2R2CQ9Y2T4 447 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 NHSQ6T4R5 1651 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 APPP05067 770 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 TBX2Q13207 712 aaPredicted RBP20.05■□□□□ 0.8
PRPF19-201ENST00000227524 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 GJD4Q96KN9 370 aaPredicted RBP20.05■□□□□ 0.8
PRPF19-201ENST00000227524 CARD6Q9BX69 1037 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 PIH1D3Q9NQM4 214 aaKnown RBP20.05■□□□□ 0.8
PRPF19-201ENST00000227524 RIPOR2Q9Y4F9 1068 aa20.05■□□□□ 0.8
PRPF19-201ENST00000227524 EP400Q96L91 3159 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 FOXN1O15353 648 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 PLA2G4AP47712 749 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 KCNQ4P56696 695 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 TTF1Q15361 905 aaPredicted RBP20.04■□□□□ 0.8
PRPF19-201ENST00000227524 NFXL1Q6ZNB6 911 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 ELOA2Q8IYF1 753 aaPredicted RBP20.04■□□□□ 0.8
PRPF19-201ENST00000227524 KRI1Q8N9T8 703 aaKnown RBP20.04■□□□□ 0.8
PRPF19-201ENST00000227524 TTLL11Q8NHH1 800 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
PRPF19-201ENST00000227524 AFF2P51816 1311 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 STK36Q9NRP7 1315 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 EFCAB8A8MWE9 144 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 MDM2Q00987 491 aaPredicted RBP20.04■□□□□ 0.8
PRPF19-201ENST00000227524 UBE3CQ15386 1083 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 TMCO3Q6UWJ1 677 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 SGMS1Q86VZ5 419 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 NOL10Q9BSC4 688 aaKnown RBP20.04■□□□□ 0.8
PRPF19-201ENST00000227524 MYL10Q9BUA6 226 aa20.04■□□□□ 0.8
PRPF19-201ENST00000227524 TRMT112Q9UI30 125 aaKnown RBP20.04■□□□□ 0.8
PRPF19-201ENST00000227524 IRS4O14654 1257 aaPredicted RBP20.03■□□□□ 0.8
PRPF19-201ENST00000227524 BCORQ6W2J9 1755 aa20.03■□□□□ 0.8
PRPF19-201ENST00000227524 ZNF532Q9HCE3 1301 aa20.03■□□□□ 0.8
PRPF19-201ENST00000227524 MAN1B1Q9UKM7 699 aa20.03■□□□□ 0.8
PRPF19-201ENST00000227524 CCDC66A2RUB6 948 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 UBE2Q2LH0YL09 131 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 IDH1O75874 414 aaKnown RBP20.02■□□□□ 0.8
PRPF19-201ENST00000227524 TMEM67Q5HYA8 995 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 MEX3CQ5U5Q3 659 aaKnown RBP20.02■□□□□ 0.8
PRPF19-201ENST00000227524 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 BAG1Q99933 345 aaPredicted RBP20.02■□□□□ 0.8
PRPF19-201ENST00000227524 SLC26A6Q9BXS9 759 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 GREM2Q9H772 168 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 TPM1P09493 284 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 CTSWP56202 376 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 SSRP1Q08945 709 aaKnown RBP20.02■□□□□ 0.8
PRPF19-201ENST00000227524 HOOK1Q9UJC3 728 aaKnown RBP20.02■□□□□ 0.8
PRPF19-201ENST00000227524 SBF2Q86WG5 1849 aa20.02■□□□□ 0.8
PRPF19-201ENST00000227524 TIAM2Q8IVF5 1701 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 GOLGA6L9A6NEM1 432 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 FMNL1O95466 1100 aaPredicted RBP20.01■□□□□ 0.79
PRPF19-201ENST00000227524 PDE6AP16499 860 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 HSP90AA4PQ58FG1 418 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 SPECC1Q5M775 1068 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 LDHAL6AQ6ZMR3 332 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 NOSTRINQ8IVI9 506 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 ONECUT3O60422 494 aaPredicted RBP20.01■□□□□ 0.79
PRPF19-201ENST00000227524 POSTNQ15063 836 aa20.01■□□□□ 0.79
PRPF19-201ENST00000227524 FAM177A1Q8N128 213 aaPredicted RBP20.01■□□□□ 0.79
PRPF19-201ENST00000227524 TCRBV5S4A2TA0A5A2 114 aa20■□□□□ 0.79
PRPF19-201ENST00000227524 STX10O60499 249 aa20■□□□□ 0.79
PRPF19-201ENST00000227524 ZNF18P17022 549 aa20■□□□□ 0.79
PRPF19-201ENST00000227524 ITGA6P23229 1130 aa20■□□□□ 0.79
PRPF19-201ENST00000227524 CASQ1P31415 396 aa20■□□□□ 0.79
PRPF19-201ENST00000227524 LIFRP42702 1097 aa20■□□□□ 0.79
PRPF19-201ENST00000227524 FMR1Q06787 632 aaKnown RBP eCLIP20■□□□□ 0.79
PRPF19-201ENST00000227524 PDILTQ8N807 584 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms