RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 CNNM2Q9H8M5 875 aa25.92■■□□□ 1.74
HOXC8-201ENST00000040584 FOCADQ5VW36 1801 aa25.92■■□□□ 1.74
HOXC8-201ENST00000040584 DICER1Q9UPY3 1922 aaKnown RBP25.92■■□□□ 1.74
HOXC8-201ENST00000040584 SPDYE2BA6NHP3 402 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 SPDYE6P0CI01 402 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 RPS12P25398 132 aaKnown RBP25.91■■□□□ 1.74
HOXC8-201ENST00000040584 GMPSP49915 693 aaPredicted RBP25.91■■□□□ 1.74
HOXC8-201ENST00000040584 ANTXR2P58335 489 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 CYB5R4Q7L1T6 521 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 KRT23Q9C075 422 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 RNF181Q9P0P0 153 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 LAMB1P07942 1786 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 PRC1O43663 620 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 KDM4AO75164 1064 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 ECM29Q5VYK3 1845 aa25.91■■□□□ 1.74
HOXC8-201ENST00000040584 PRDM1O75626 825 aa25.9■■□□□ 1.74
HOXC8-201ENST00000040584 SLC3A2P08195 630 aaKnown RBP25.9■■□□□ 1.74
HOXC8-201ENST00000040584 FGD1P98174 961 aa25.9■■□□□ 1.74
HOXC8-201ENST00000040584 CUL4AQ13619 759 aa25.9■■□□□ 1.74
HOXC8-201ENST00000040584 DYNLL2Q96FJ2 89 aa25.9■■□□□ 1.74
HOXC8-201ENST00000040584 ZSWIM5Q9P217 1185 aa25.9■■□□□ 1.74
HOXC8-201ENST00000040584 FBXL16Q8N461 479 aa25.89■■□□□ 1.74
HOXC8-201ENST00000040584 AGXT2Q9BYV1 514 aa25.89■■□□□ 1.74
HOXC8-201ENST00000040584 DDX60LQ5H9U9 1706 aaKnown RBP25.89■■□□□ 1.74
HOXC8-201ENST00000040584 MYH1P12882 1939 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 FGRP09769 529 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 ZFPM1Q8IX07 1006 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 BRF1Q92994 677 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 IDI2Q9BXS1 227 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 OSBPL5Q9H0X9 879 aaPredicted RBP25.89■■□□□ 1.73
HOXC8-201ENST00000040584 MYOZ2Q9NPC6 264 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 GPHNQ9NQX3 736 aaPredicted RBP25.89■■□□□ 1.73
HOXC8-201ENST00000040584 FAM198AQ9UFP1 575 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 TPCN1Q9ULQ1 816 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 WDR19Q8NEZ3 1342 aa25.89■■□□□ 1.73
HOXC8-201ENST00000040584 TCP10Q12799 353 aa25.88■■□□□ 1.73
HOXC8-201ENST00000040584 MTMR14Q8NCE2 650 aa25.88■■□□□ 1.73
HOXC8-201ENST00000040584 DPF2Q92785 391 aa25.88■■□□□ 1.73
HOXC8-201ENST00000040584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.88■■□□□ 1.73
HOXC8-201ENST00000040584 LARGE1O95461 756 aa25.87■■□□□ 1.73
HOXC8-201ENST00000040584 ZNF280AP59817 542 aaPredicted RBP25.87■■□□□ 1.73
HOXC8-201ENST00000040584 C9orf131Q5VYM1 1079 aa25.87■■□□□ 1.73
HOXC8-201ENST00000040584 MICALL2Q8IY33 904 aa25.87■■□□□ 1.73
HOXC8-201ENST00000040584 INTS4Q96HW7 963 aaKnown RBP25.87■■□□□ 1.73
HOXC8-201ENST00000040584 ZSCAN31Q96LW9 406 aaPredicted RBP25.87■■□□□ 1.73
HOXC8-201ENST00000040584 CNOT7Q9UIV1 285 aaKnown RBP25.87■■□□□ 1.73
HOXC8-201ENST00000040584 CLRN2A0PK11 232 aa25.87■■□□□ 1.73
HOXC8-201ENST00000040584 PCP11498 1178 aaKnown RBP25.87■■□□□ 1.73
HOXC8-201ENST00000040584 PDE4BQ07343 736 aa25.87■■□□□ 1.73
HOXC8-201ENST00000040584 DDX49Q9Y6V7 483 aaKnown RBP25.87■■□□□ 1.73
HOXC8-201ENST00000040584 RBM26Q5T8P6 1007 aaKnown RBP25.86■■□□□ 1.73
HOXC8-201ENST00000040584 ESR2Q92731 530 aa25.86■■□□□ 1.73
HOXC8-201ENST00000040584 SH2B1Q9NRF2 756 aaPredicted RBP25.86■■□□□ 1.73
HOXC8-201ENST00000040584 ZNF70Q9UC06 446 aaPredicted RBP25.86■■□□□ 1.73
HOXC8-201ENST00000040584 ROBO3Q96MS0 1386 aa25.86■■□□□ 1.73
HOXC8-201ENST00000040584 RANBP6O60518 1105 aaKnown RBP25.85■■□□□ 1.73
HOXC8-201ENST00000040584 EGFRP00533 1210 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 ME3Q16798 604 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 GPC2Q8N158 579 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 SLC44A5Q8NCS7 719 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 ZBED3Q96IU2 234 aaPredicted RBP25.85■■□□□ 1.73
HOXC8-201ENST00000040584 WNT10BO00744 389 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 ORC4O43929 436 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 NBPF9Q3BBW0 867 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 TTC6Q86TZ1 520 aa25.85■■□□□ 1.73
HOXC8-201ENST00000040584 MMP14P50281 582 aa25.84■■□□□ 1.73
HOXC8-201ENST00000040584 APOBRQ0VD83 1088 aa25.84■■□□□ 1.73
HOXC8-201ENST00000040584 SPDYE2Q495Y8 402 aa25.84■■□□□ 1.73
HOXC8-201ENST00000040584 SAMD7Q7Z3H4 446 aa25.84■■□□□ 1.73
HOXC8-201ENST00000040584 ZKSCAN3Q9BRR0 538 aa25.84■■□□□ 1.73
HOXC8-201ENST00000040584 TMOD2Q9NZR1 351 aa25.84■■□□□ 1.73
HOXC8-201ENST00000040584 NPM3O75607 178 aaKnown RBP25.83■■□□□ 1.73
HOXC8-201ENST00000040584 MKNK2Q9HBH9 465 aa25.83■■□□□ 1.73
HOXC8-201ENST00000040584 TCP10L2B9ZVM9 353 aa25.83■■□□□ 1.72
HOXC8-201ENST00000040584 C16orf86Q6ZW13 317 aa25.83■■□□□ 1.72
HOXC8-201ENST00000040584 IGDCC4Q8TDY8 1250 aa25.83■■□□□ 1.72
HOXC8-201ENST00000040584 TMEM87BQ96K49 555 aa25.83■■□□□ 1.72
HOXC8-201ENST00000040584 SH2B2O14492 632 aaPredicted RBP25.82■■□□□ 1.72
HOXC8-201ENST00000040584 GRIN3BO60391 1043 aa25.82■■□□□ 1.72
HOXC8-201ENST00000040584 TBC1D10BQ4KMP7 808 aaPredicted RBP25.82■■□□□ 1.72
HOXC8-201ENST00000040584 FAM47AQ5JRC9 791 aa25.82■■□□□ 1.72
HOXC8-201ENST00000040584 SH3BP5LQ7L8J4 393 aa25.82■■□□□ 1.72
HOXC8-201ENST00000040584 NECAB1Q8N987 351 aa25.82■■□□□ 1.72
HOXC8-201ENST00000040584 VEZTQ9HBM0 779 aa25.82■■□□□ 1.72
HOXC8-201ENST00000040584 DDTLA6NHG4 134 aaPredicted RBP25.81■■□□□ 1.72
HOXC8-201ENST00000040584 IFIT3O14879 490 aaKnown RBP25.81■■□□□ 1.72
HOXC8-201ENST00000040584 MYO1BO43795 1136 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 ENTPD3O75355 529 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 DDNO94850 711 aaPredicted RBP25.81■■□□□ 1.72
HOXC8-201ENST00000040584 CDK8P49336 464 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 TMEM67Q5HYA8 995 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 MCTP1Q6DN14 999 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 ZSCAN29Q8IWY8 852 aaPredicted RBP25.81■■□□□ 1.72
HOXC8-201ENST00000040584 ANGEL1Q9UNK9 670 aaKnown RBP25.81■■□□□ 1.72
HOXC8-201ENST00000040584 EVCP57679 992 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 STK3Q13188 491 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 SENP2Q9HC62 589 aa25.81■■□□□ 1.72
HOXC8-201ENST00000040584 HLA-DOAP06340 250 aa25.8■■□□□ 1.72
HOXC8-201ENST00000040584 GABPAQ06546 454 aa25.8■■□□□ 1.72
HOXC8-201ENST00000040584 ST3GAL1Q11201 340 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms