RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 IFI6P09912 130 aa-0.89□□□□□ -2.55
SCFD1-214ENST00000554819 COX7BP24311 80 aa-0.89□□□□□ -2.55
SCFD1-214ENST00000554819 ABRACLQ9P1F3 81 aa-0.89□□□□□ -2.55
SCFD1-214ENST00000554819 TMEM218A2RU14 115 aa-0.9□□□□□ -2.55
SCFD1-214ENST00000554819 NDUFB1O75438 58 aa-0.9□□□□□ -2.55
SCFD1-214ENST00000554819 HMGN2P05204 90 aaKnown RBP-0.9□□□□□ -2.55
SCFD1-214ENST00000554819 SARNPP82979 210 aaKnown RBP-0.9□□□□□ -2.55
SCFD1-214ENST00000554819 BVES-AS1Q5T3Y7 98 aa-0.9□□□□□ -2.55
SCFD1-214ENST00000554819 ZNF720Q7Z2F6 126 aa-0.9□□□□□ -2.55
SCFD1-214ENST00000554819 KCNQ1DNQ9H478 68 aa-0.9□□□□□ -2.55
SCFD1-214ENST00000554819 PDCD5O14737 125 aa-0.91□□□□□ -2.56
SCFD1-214ENST00000554819 LEPROTL1O95214 131 aa-0.91□□□□□ -2.56
SCFD1-214ENST00000554819 S100A10P60903 97 aa-0.91□□□□□ -2.56
SCFD1-214ENST00000554819 CRIP1P50238 77 aa-0.93□□□□□ -2.56
SCFD1-214ENST00000554819 C14orf144Q96I85 54 aa-0.93□□□□□ -2.56
SCFD1-214ENST00000554819 NMES1Q9C002 83 aa-0.93□□□□□ -2.56
SCFD1-214ENST00000554819 A0A087WXM4 84 aa-0.94□□□□□ -2.56
SCFD1-214ENST00000554819 SMIM27A0A1W2PRY6 76 aa-0.94□□□□□ -2.56
SCFD1-214ENST00000554819 IQCF6A8MYZ5 107 aa-0.94□□□□□ -2.56
SCFD1-214ENST00000554819 LINC00032P0C843 101 aa-0.94□□□□□ -2.56
SCFD1-214ENST00000554819 RPL38P63173 70 aaKnown RBP-0.94□□□□□ -2.56
SCFD1-214ENST00000554819 COL5A1-AS1Q5SY13 56 aa-0.94□□□□□ -2.56
SCFD1-214ENST00000554819 K7EIM0 57 aa-0.95□□□□□ -2.56
SCFD1-214ENST00000554819 RPL39P5Q59GN2 51 aa-0.95□□□□□ -2.56
SCFD1-214ENST00000554819 SNHG12Q9BXW3 62 aa-0.95□□□□□ -2.56
SCFD1-214ENST00000554819 DPY30Q9C005 99 aa-0.95□□□□□ -2.56
SCFD1-214ENST00000554819 FAUP35544 74 aaKnown RBP-0.96□□□□□ -2.56
SCFD1-214ENST00000554819 TCEAL7Q9BRU2 100 aa-0.96□□□□□ -2.56
SCFD1-214ENST00000554819 A0A1B0GUT8 65 aa-0.97□□□□□ -2.56
SCFD1-214ENST00000554819 H3BVH4 76 aa-0.97□□□□□ -2.56
SCFD1-214ENST00000554819 ARHGAP5-AS1Q96IT6 56 aa-0.97□□□□□ -2.56
SCFD1-214ENST00000554819 ACBD7Q8N6N7 88 aa-0.98□□□□□ -2.57
SCFD1-214ENST00000554819 C20orf78Q9BR46 151 aa-0.98□□□□□ -2.57
SCFD1-214ENST00000554819 SMIM13P0DJ93 91 aa-0.99□□□□□ -2.57
SCFD1-214ENST00000554819 RBP2P50120 134 aa-0.99□□□□□ -2.57
SCFD1-214ENST00000554819 RPL39P62891 51 aaKnown RBP-1□□□□□ -2.57
SCFD1-214ENST00000554819 PVALEFA0A1B0GWK0 134 aa-1.01□□□□□ -2.57
SCFD1-214ENST00000554819 CYB5AP00167 134 aa-1.01□□□□□ -2.57
SCFD1-214ENST00000554819 RPL39LQ96EH5 51 aaKnown RBP-1.01□□□□□ -2.57
SCFD1-214ENST00000554819 SMIM11AP58511 58 aa-1.02□□□□□ -2.57
SCFD1-214ENST00000554819 SNRPGP15A8MWD9 76 aa-1.03□□□□□ -2.57
SCFD1-214ENST00000554819 IFI27P40305 119 aaPredicted RBP-1.03□□□□□ -2.57
SCFD1-214ENST00000554819 PEA15Q15121 130 aa-1.03□□□□□ -2.57
SCFD1-214ENST00000554819 NREPQ16612 68 aa-1.03□□□□□ -2.57
SCFD1-214ENST00000554819 LINC00308Q8TCZ7 52 aa-1.03□□□□□ -2.57
SCFD1-214ENST00000554819 M0R143 59 aa-1.04□□□□□ -2.58
SCFD1-214ENST00000554819 ST20Q9HBF5 79 aa-1.04□□□□□ -2.58
SCFD1-214ENST00000554819 K7EMI3 77 aa-1.05□□□□□ -2.58
SCFD1-214ENST00000554819 SNRPGP62308 76 aaKnown RBP-1.05□□□□□ -2.58
SCFD1-214ENST00000554819 TMEM167BQ9NRX6 74 aa-1.05□□□□□ -2.58
SCFD1-214ENST00000554819 MYMXA0A1B0GTQ4 84 aa-1.06□□□□□ -2.58
SCFD1-214ENST00000554819 UBL5Q9BZL1 73 aa-1.06□□□□□ -2.58
SCFD1-214ENST00000554819 CEBPZOSA8MTT3 80 aa-1.08□□□□□ -2.58
SCFD1-214ENST00000554819 S100ZQ8WXG8 99 aa-1.08□□□□□ -2.58
SCFD1-214ENST00000554819 IGIPA6NJ69 53 aa-1.1□□□□□ -2.59
SCFD1-214ENST00000554819 UMAD1C9J7I0 102 aa-1.1□□□□□ -2.59
SCFD1-214ENST00000554819 S100A13Q99584 98 aa-1.1□□□□□ -2.59
SCFD1-214ENST00000554819 V9GYS6 101 aa-1.1□□□□□ -2.59
SCFD1-214ENST00000554819 SNRPFP62306 86 aaKnown RBP-1.11□□□□□ -2.59
SCFD1-214ENST00000554819 LINC00643Q86TS7 51 aa-1.11□□□□□ -2.59
SCFD1-214ENST00000554819 PLNP26678 52 aa-1.13□□□□□ -2.59
SCFD1-214ENST00000554819 PYY3Q5JQD4 70 aa-1.13□□□□□ -2.59
SCFD1-214ENST00000554819 H0YGX0 51 aa-1.14□□□□□ -2.59
SCFD1-214ENST00000554819 S100A16Q96FQ6 103 aaKnown RBP-1.16□□□□□ -2.6
SCFD1-214ENST00000554819 SERF2P84101 59 aa-1.17□□□□□ -2.6
SCFD1-214ENST00000554819 GNG2P59768 71 aa-1.19□□□□□ -2.6
SCFD1-214ENST00000554819 SMCO4Q9NRQ5 59 aa-1.19□□□□□ -2.6
SCFD1-214ENST00000554819 LINC01549A6NIU2 74 aa-1.2□□□□□ -2.6
SCFD1-214ENST00000554819 ATXN8Q156A1 80 aa-1.2□□□□□ -2.6
SCFD1-214ENST00000554819 ATP5EP2Q5VTU8 51 aa-1.21□□□□□ -2.6
SCFD1-214ENST00000554819 Q9H521 79 aa-1.21□□□□□ -2.6
SCFD1-214ENST00000554819 CMC2Q9NRP2 79 aa-1.21□□□□□ -2.6
SCFD1-214ENST00000554819 KANTRA0A1W2PQU2 76 aa-1.23□□□□□ -2.61
SCFD1-214ENST00000554819 GNG13Q9P2W3 67 aa-1.24□□□□□ -2.61
SCFD1-214ENST00000554819 ADIRFQ15847 76 aa-1.28□□□□□ -2.61
SCFD1-214ENST00000554819 C18orf32Q8TCD1 76 aa-1.28□□□□□ -2.61
SCFD1-214ENST00000554819 SMIM31A0A1B0GVY4 71 aa-1.34□□□□□ -2.62
SCFD1-214ENST00000554819 TOMM5Q8N4H5 51 aa-1.38□□□□□ -2.63
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms