RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PRR15Q8IV56 129 aa2.35□□□□□ -2.03
RNU4-4P-201ENST00000364588 TMEM254Q8TBM7 123 aa2.35□□□□□ -2.03
RNU4-4P-201ENST00000364588 LOC110117498A0A087WWA1 95 aa2.34□□□□□ -2.03
RNU4-4P-201ENST00000364588 A6NN06 94 aa2.34□□□□□ -2.03
RNU4-4P-201ENST00000364588 NAA38Q9BRA0 125 aaKnown RBP2.34□□□□□ -2.03
RNU4-4P-201ENST00000364588 C14orf132Q9NPU4 83 aa2.34□□□□□ -2.03
RNU4-4P-201ENST00000364588 UQCR10Q9UDW1 63 aa2.34□□□□□ -2.03
RNU4-4P-201ENST00000364588 NEBP20929 6669 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 FAM236AA0A1B0GUQ0 79 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 FAM236BA0A1B0GV22 79 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 hDV103S1A0JD37 113 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 JMJD7-PLA2G4BH0Y9G9 81 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 K7EQZ3 153 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 MT1BP07438 61 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 ATXN8Q156A1 80 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 NREPQ16612 68 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 C4orf26Q17RF5 130 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 C5orf47Q569G3 176 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 Q5W150 140 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 C7orf65Q6ZTY9 151 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
RNU4-4P-201ENST00000364588 A0A1B0GW54 56 aa2.32□□□□□ -2.04
RNU4-4P-201ENST00000364588 PDE6GP18545 87 aa2.32□□□□□ -2.04
RNU4-4P-201ENST00000364588 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
RNU4-4P-201ENST00000364588 Q5VV11 94 aa2.31□□□□□ -2.04
RNU4-4P-201ENST00000364588 CAMK2N1Q7Z7J9 78 aa2.3□□□□□ -2.04
RNU4-4P-201ENST00000364588 HCG22E2RYF7 251 aa2.29□□□□□ -2.04
RNU4-4P-201ENST00000364588 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
RNU4-4P-201ENST00000364588 BPY2O14599 106 aa2.28□□□□□ -2.04
RNU4-4P-201ENST00000364588 CASC2Q6XLA1 102 aa2.28□□□□□ -2.04
RNU4-4P-201ENST00000364588 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
RNU4-4P-201ENST00000364588 S4R3F8 94 aa2.28□□□□□ -2.04
RNU4-4P-201ENST00000364588 M0R143 59 aa2.27□□□□□ -2.05
RNU4-4P-201ENST00000364588 CSAG1Q6PB30 78 aa2.27□□□□□ -2.05
RNU4-4P-201ENST00000364588 LCA10Q71F78 164 aa2.27□□□□□ -2.05
RNU4-4P-201ENST00000364588 C1orf64Q8NEQ6 169 aa2.26□□□□□ -2.05
RNU4-4P-201ENST00000364588 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
RNU4-4P-201ENST00000364588 KLKP1Q107X0 134 aa2.25□□□□□ -2.05
RNU4-4P-201ENST00000364588 IMUPQ9GZP8 106 aa2.25□□□□□ -2.05
RNU4-4P-201ENST00000364588 KMT2DO14686 5537 aa2.24□□□□□ -2.05
RNU4-4P-201ENST00000364588 TSTD3H0UI37 97 aa2.24□□□□□ -2.05
RNU4-4P-201ENST00000364588 H3BT86 120 aa2.24□□□□□ -2.05
RNU4-4P-201ENST00000364588 BATFQ16520 125 aa2.24□□□□□ -2.05
RNU4-4P-201ENST00000364588 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
RNU4-4P-201ENST00000364588 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
RNU4-4P-201ENST00000364588 A0A087WVE0 104 aa2.21□□□□□ -2.06
RNU4-4P-201ENST00000364588 A0A1W2PPM0 123 aa2.2□□□□□ -2.06
RNU4-4P-201ENST00000364588 SPRR2EP22531 72 aa2.2□□□□□ -2.06
RNU4-4P-201ENST00000364588 SPRR2BP35325 72 aa2.2□□□□□ -2.06
RNU4-4P-201ENST00000364588 SPRR2AP35326 72 aa2.2□□□□□ -2.06
RNU4-4P-201ENST00000364588 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
RNU4-4P-201ENST00000364588 TAX1BP3O14907 124 aa2.19□□□□□ -2.06
RNU4-4P-201ENST00000364588 UBL5Q9BZL1 73 aa2.19□□□□□ -2.06
RNU4-4P-201ENST00000364588 CRIPTQ9P021 101 aa2.19□□□□□ -2.06
RNU4-4P-201ENST00000364588 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
RNU4-4P-201ENST00000364588 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
RNU4-4P-201ENST00000364588 CYP4F30PQ9H0H9 118 aa2.17□□□□□ -2.06
RNU4-4P-201ENST00000364588 TP53AIP1Q9HCN2 124 aa2.17□□□□□ -2.06
RNU4-4P-201ENST00000364588 SPCS1Q9Y6A9 102 aa2.17□□□□□ -2.06
RNU4-4P-201ENST00000364588 K7EP34 96 aa2.16□□□□□ -2.06
RNU4-4P-201ENST00000364588 SMIM6P0DI80 62 aa2.16□□□□□ -2.06
RNU4-4P-201ENST00000364588 MT1XP80297 61 aa2.15□□□□□ -2.07
RNU4-4P-201ENST00000364588 KRTAP8-1Q8IUC2 63 aa2.15□□□□□ -2.07
RNU4-4P-201ENST00000364588 PRO2289Q9P1D8 64 aa2.15□□□□□ -2.07
RNU4-4P-201ENST00000364588 A8MUN3 132 aa2.14□□□□□ -2.07
RNU4-4P-201ENST00000364588 NDUFC1O43677 76 aa2.14□□□□□ -2.07
RNU4-4P-201ENST00000364588 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
RNU4-4P-201ENST00000364588 ADM2Q7Z4H4 148 aa2.14□□□□□ -2.07
RNU4-4P-201ENST00000364588 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
RNU4-4P-201ENST00000364588 TRAV22A0A0B4J277 110 aa2.13□□□□□ -2.07
RNU4-4P-201ENST00000364588 H0YAA0 97 aa2.13□□□□□ -2.07
RNU4-4P-201ENST00000364588 LOC101927531A0A1B0GV80 90 aa2.12□□□□□ -2.07
RNU4-4P-201ENST00000364588 SPRR2DP22532 72 aa2.12□□□□□ -2.07
RNU4-4P-201ENST00000364588 PLAC4Q8WY50 150 aa2.12□□□□□ -2.07
RNU4-4P-201ENST00000364588 H0Y9P7 68 aa2.09□□□□□ -2.07
RNU4-4P-201ENST00000364588 ACYP1P07311 99 aa2.09□□□□□ -2.07
RNU4-4P-201ENST00000364588 P0C880 135 aa2.08□□□□□ -2.08
RNU4-4P-201ENST00000364588 R4GN34 69 aa2.08□□□□□ -2.08
RNU4-4P-201ENST00000364588 M0QZ58 72 aa2.07□□□□□ -2.08
RNU4-4P-201ENST00000364588 UQCRQO14949 82 aa2.07□□□□□ -2.08
RNU4-4P-201ENST00000364588 ETDBQ3ZM63 59 aa2.07□□□□□ -2.08
RNU4-4P-201ENST00000364588 COL5A1-AS1Q5SY13 56 aa2.07□□□□□ -2.08
RNU4-4P-201ENST00000364588 ATOX1O00244 68 aa2.06□□□□□ -2.08
RNU4-4P-201ENST00000364588 HIST1H4AP62805 103 aaKnown RBP2.06□□□□□ -2.08
RNU4-4P-201ENST00000364588 LINC01554Q52M75 96 aa2.06□□□□□ -2.08
RNU4-4P-201ENST00000364588 LOC105371267A0A1B0GV96 52 aa2.05□□□□□ -2.08
RNU4-4P-201ENST00000364588 LINC00208Q96KT6 92 aa2.05□□□□□ -2.08
RNU4-4P-201ENST00000364588 F8W1H4 67 aa2.04□□□□□ -2.08
RNU4-4P-201ENST00000364588 GTF2H5Q6ZYL4 71 aa2.04□□□□□ -2.08
RNU4-4P-201ENST00000364588 C20orf197Q8N268 126 aa2.04□□□□□ -2.08
RNU4-4P-201ENST00000364588 ATP5EP2Q5VTU8 51 aa2.02□□□□□ -2.09
RNU4-4P-201ENST00000364588 MP68P56378 58 aa2□□□□□ -2.09
RNU4-4P-201ENST00000364588 FAM240AA0A1B0GVK7 77 aa1.99□□□□□ -2.09
RNU4-4P-201ENST00000364588 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
RNU4-4P-201ENST00000364588 MT-ATP8P03928 68 aa1.98□□□□□ -2.09
RNU4-4P-201ENST00000364588 DMAC1Q96GE9 116 aa1.98□□□□□ -2.09
RNU4-4P-201ENST00000364588 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
RNU4-4P-201ENST00000364588 PCP4L1A6NKN8 68 aa1.96□□□□□ -2.1
RNU4-4P-201ENST00000364588 LINC00643Q86TS7 51 aa1.96□□□□□ -2.1
RNU4-4P-201ENST00000364588 H3BPC8 53 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms