RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
CDC42SE2-201ENST00000360515 Q8N9L7 120 aa2.94□□□□□ -1.94
CDC42SE2-201ENST00000360515 PRR15LQ9BU68 103 aa2.94□□□□□ -1.94
CDC42SE2-201ENST00000360515 ZCCHC13Q8WW36 166 aaKnown RBP2.94□□□□□ -1.94
CDC42SE2-201ENST00000360515 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
CDC42SE2-201ENST00000360515 LINC00313P59037 77 aa2.94□□□□□ -1.94
CDC42SE2-201ENST00000360515 IGLV5-48A0A075B6I7 105 aa2.92□□□□□ -1.94
CDC42SE2-201ENST00000360515 TOMM7Q9P0U1 55 aa2.92□□□□□ -1.94
CDC42SE2-201ENST00000360515 ETDCA0A1B0GVM5 59 aa2.92□□□□□ -1.94
CDC42SE2-201ENST00000360515 LINC00575Q6W349 94 aa2.92□□□□□ -1.94
CDC42SE2-201ENST00000360515 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
CDC42SE2-201ENST00000360515 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
CDC42SE2-201ENST00000360515 LOC101927531A0A1B0GV80 90 aa2.91□□□□□ -1.94
CDC42SE2-201ENST00000360515 HRES1P13985 223 aa2.91□□□□□ -1.94
CDC42SE2-201ENST00000360515 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
CDC42SE2-201ENST00000360515 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
CDC42SE2-201ENST00000360515 A8MWP4 228 aa2.9□□□□□ -1.95
CDC42SE2-201ENST00000360515 MP68P56378 58 aa2.9□□□□□ -1.95
CDC42SE2-201ENST00000360515 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.95
CDC42SE2-201ENST00000360515 C9orf92A6NGG3 77 aa2.9□□□□□ -1.95
CDC42SE2-201ENST00000360515 ELOF1P60002 83 aaKnown RBP2.9□□□□□ -1.95
CDC42SE2-201ENST00000360515 H3BQ85 93 aa2.89□□□□□ -1.95
CDC42SE2-201ENST00000360515 NDUFB1O75438 58 aa2.89□□□□□ -1.95
CDC42SE2-201ENST00000360515 DHRS4-AS1Q9P1J3 65 aa2.89□□□□□ -1.95
CDC42SE2-201ENST00000360515 IGLV9-49A0A0B4J1Y8 123 aa2.89□□□□□ -1.95
CDC42SE2-201ENST00000360515 Q6ZQY7 126 aa2.89□□□□□ -1.95
CDC42SE2-201ENST00000360515 LINC00208Q96KT6 92 aa2.89□□□□□ -1.95
CDC42SE2-201ENST00000360515 COX7BP24311 80 aa2.89□□□□□ -1.95
CDC42SE2-201ENST00000360515 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
CDC42SE2-201ENST00000360515 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.88□□□□□ -1.95
CDC42SE2-201ENST00000360515 KRTAP19-8Q3LI54 63 aa2.87□□□□□ -1.95
CDC42SE2-201ENST00000360515 ST20-AS1Q8NBB2 130 aa2.87□□□□□ -1.95
CDC42SE2-201ENST00000360515 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
CDC42SE2-201ENST00000360515 ADM2Q7Z4H4 148 aa2.87□□□□□ -1.95
CDC42SE2-201ENST00000360515 CASC2Q6XLA1 102 aa2.86□□□□□ -1.95
CDC42SE2-201ENST00000360515 SPANXA2-OT1Q8N9U9 137 aa2.86□□□□□ -1.95
CDC42SE2-201ENST00000360515 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
CDC42SE2-201ENST00000360515 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
CDC42SE2-201ENST00000360515 SPINK7P58062 85 aa2.84□□□□□ -1.95
CDC42SE2-201ENST00000360515 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.95
CDC42SE2-201ENST00000360515 KMT2DO14686 5537 aa2.84□□□□□ -1.96
CDC42SE2-201ENST00000360515 NOTCH2NLQ7Z3S9 236 aa2.84□□□□□ -1.96
CDC42SE2-201ENST00000360515 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
CDC42SE2-201ENST00000360515 COA5Q86WW8 74 aa2.83□□□□□ -1.96
CDC42SE2-201ENST00000360515 LCE3BQ5TA77 95 aa2.82□□□□□ -1.96
CDC42SE2-201ENST00000360515 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
CDC42SE2-201ENST00000360515 MT1BP07438 61 aa2.82□□□□□ -1.96
CDC42SE2-201ENST00000360515 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
CDC42SE2-201ENST00000360515 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
CDC42SE2-201ENST00000360515 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
CDC42SE2-201ENST00000360515 A0A1W2PNM2 257 aa2.8□□□□□ -1.96
CDC42SE2-201ENST00000360515 DSCR10P59022 87 aa2.8□□□□□ -1.96
CDC42SE2-201ENST00000360515 K7EQZ3 153 aa2.8□□□□□ -1.96
CDC42SE2-201ENST00000360515 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
CDC42SE2-201ENST00000360515 H3BPC8 53 aa2.79□□□□□ -1.96
CDC42SE2-201ENST00000360515 A0A1B0GW54 56 aa2.79□□□□□ -1.96
CDC42SE2-201ENST00000360515 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
CDC42SE2-201ENST00000360515 IGHV6-1A0A0B4J1U7 121 aa2.78□□□□□ -1.96
CDC42SE2-201ENST00000360515 CSAG1Q6PB30 78 aa2.78□□□□□ -1.96
CDC42SE2-201ENST00000360515 H0Y9P7 68 aa2.78□□□□□ -1.96
CDC42SE2-201ENST00000360515 DEFB116Q30KQ4 102 aa2.78□□□□□ -1.96
CDC42SE2-201ENST00000360515 IGFL1Q6UW32 110 aa2.78□□□□□ -1.96
CDC42SE2-201ENST00000360515 WFDC13Q8IUB5 93 aa2.77□□□□□ -1.97
CDC42SE2-201ENST00000360515 Q96NJ1 140 aa2.76□□□□□ -1.97
CDC42SE2-201ENST00000360515 ROMO1P60602 79 aa2.75□□□□□ -1.97
CDC42SE2-201ENST00000360515 DEFB105AQ8NG35 78 aa2.74□□□□□ -1.97
CDC42SE2-201ENST00000360515 KRTAP4-7Q9BYR0 210 aa2.74□□□□□ -1.97
CDC42SE2-201ENST00000360515 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
CDC42SE2-201ENST00000360515 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
CDC42SE2-201ENST00000360515 KRTAP4-9Q9BYQ8 210 aa2.72□□□□□ -1.97
CDC42SE2-201ENST00000360515 SPATA8Q6RVD6 105 aa2.72□□□□□ -1.97
CDC42SE2-201ENST00000360515 SPRR2EP22531 72 aa2.7□□□□□ -1.98
CDC42SE2-201ENST00000360515 SPRR2BP35325 72 aa2.7□□□□□ -1.98
CDC42SE2-201ENST00000360515 SPRR2AP35326 72 aa2.7□□□□□ -1.98
CDC42SE2-201ENST00000360515 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
CDC42SE2-201ENST00000360515 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
CDC42SE2-201ENST00000360515 P0C880 135 aa2.68□□□□□ -1.98
CDC42SE2-201ENST00000360515 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
CDC42SE2-201ENST00000360515 UQCR11O14957 56 aa2.66□□□□□ -1.98
CDC42SE2-201ENST00000360515 A0A087WSZ3 146 aa2.65□□□□□ -1.98
CDC42SE2-201ENST00000360515 A0A1B0GU69 56 aa2.65□□□□□ -1.98
CDC42SE2-201ENST00000360515 SPRR2DP22532 72 aa2.64□□□□□ -1.99
CDC42SE2-201ENST00000360515 H1FX-AS1Q4G0G2 97 aa2.63□□□□□ -1.99
CDC42SE2-201ENST00000360515 TP53AIP1Q9HCN2 124 aa2.63□□□□□ -1.99
CDC42SE2-201ENST00000360515 MMP24-AS1A0A0U1RRL7 71 aa2.63□□□□□ -1.99
CDC42SE2-201ENST00000360515 CRIPTQ9P021 101 aa2.62□□□□□ -1.99
CDC42SE2-201ENST00000360515 ACYP2P14621 99 aa2.62□□□□□ -1.99
CDC42SE2-201ENST00000360515 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CDC42SE2-201ENST00000360515 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
CDC42SE2-201ENST00000360515 LINC00472Q9H8W2 130 aa2.61□□□□□ -1.99
CDC42SE2-201ENST00000360515 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
CDC42SE2-201ENST00000360515 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
CDC42SE2-201ENST00000360515 DMAC1Q96GE9 116 aa2.59□□□□□ -1.99
CDC42SE2-201ENST00000360515 NDUFAF8A1L188 74 aa2.58□□□□□ -2
CDC42SE2-201ENST00000360515 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
CDC42SE2-201ENST00000360515 LCE4AQ5TA78 99 aa2.57□□□□□ -2
CDC42SE2-201ENST00000360515 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
CDC42SE2-201ENST00000360515 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
CDC42SE2-201ENST00000360515 MT1XP80297 61 aa2.54□□□□□ -2
CDC42SE2-201ENST00000360515 MRPL34Q9BQ48 92 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 711.3 ms