RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SNHG12Q9BXW3 62 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 SEC11CQ9BY50 192 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 SMIM26A0A096LP01 95 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 IGHV6-1A0A0B4J1U7 121 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 TEX49A0A1B0GTD5 131 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 A0A1B0GVX0 72 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 LINC01546A6NGU7 62 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 A8MUU9 505 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 ZNF73O43830 326 aaPredicted RBP1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 SMIM13P0DJ93 91 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 SCGB1C2P0DMR2 95 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 ZNF22P17026 224 aaPredicted RBP1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 ADCYAP1P18509 176 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 S100A7L2Q5SY68 101 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 MIR7-3HGQ8N6C7 128 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 OBSCN-AS1Q96MR7 158 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 Q96NJ1 140 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 YPEL4Q96NS1 127 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 SPANXDQ9BXN6 97 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 IMUPQ9GZP8 106 aa1.72□□□□□ -2.13
PDLIM5-218ENST00000513341 TRAV23DV6A0A075B6W5 121 aa1.71□□□□□ -2.14
PDLIM5-218ENST00000513341 J3QQQ9 107 aa1.71□□□□□ -2.14
PDLIM5-218ENST00000513341 S100A2P29034 98 aa1.71□□□□□ -2.14
PDLIM5-218ENST00000513341 HSD52Q0P140 79 aa1.71□□□□□ -2.14
PDLIM5-218ENST00000513341 MEIG1Q5JSS6 88 aa1.71□□□□□ -2.14
PDLIM5-218ENST00000513341 SMCO4Q9NRQ5 59 aa1.71□□□□□ -2.14
PDLIM5-218ENST00000513341 ZNF815PA8K554 130 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 APOC3P02656 99 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 DEFB116Q30KQ4 102 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 TMEM170BQ5T4T1 132 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 IGFL1Q6UW32 110 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 KTN1-AS1Q86SY8 53 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 PRR15Q8IV56 129 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 SVBPQ8N300 66 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 TRAPPC1Q9Y5R8 145 aa1.7□□□□□ -2.14
PDLIM5-218ENST00000513341 TRBV7-6A0A0J9YX20 115 aa1.69□□□□□ -2.14
PDLIM5-218ENST00000513341 MYMXA0A1B0GTQ4 84 aa1.69□□□□□ -2.14
PDLIM5-218ENST00000513341 LST1O00453 97 aa1.69□□□□□ -2.14
PDLIM5-218ENST00000513341 TRGC2P03986 189 aa1.69□□□□□ -2.14
PDLIM5-218ENST00000513341 HRES1P13985 223 aa1.69□□□□□ -2.14
PDLIM5-218ENST00000513341 PYY3Q5JQD4 70 aa1.69□□□□□ -2.14
PDLIM5-218ENST00000513341 MIEN1Q9BRT3 115 aa1.69□□□□□ -2.14
PDLIM5-218ENST00000513341 IGLV5-48A0A075B6I7 105 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 TMEM223A0PJW6 202 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 C11orf86A6NJI1 115 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 A8MUN3 132 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 HBDP02042 147 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 LCA10Q71F78 164 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 BAGE3Q86Y29 109 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 DEFB105AQ8NG35 78 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 C18orf32Q8TCD1 76 aa1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 CHCHD1Q96BP2 118 aaKnown RBP1.68□□□□□ -2.14
PDLIM5-218ENST00000513341 SPRR2EP22531 72 aa1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 SPRR2BP35325 72 aa1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 SPRR2AP35326 72 aa1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 LINC00313P59037 77 aa1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 ELOF1P60002 83 aaKnown RBP1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 TMEM258P61165 79 aa1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 Q6JHZ5 121 aa1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 COPS9Q8WXC6 57 aa1.67□□□□□ -2.14
PDLIM5-218ENST00000513341 TRAV12-1A0A0B4J245 112 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 TRBV7-7A0A0K0K1E9 115 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 A0A1B0GW54 56 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 TAX1BP3O14907 124 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 FABP2P12104 132 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST1H2BOP23527 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 COX7BP24311 80 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST1H2BBP33778 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST1H2BDP58876 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST1H2BCP62807 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 PMCHL1Q16048 86 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST2H2BEQ16778 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 Q5W150 140 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 BRK1Q8WUW1 75 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST1H2BHQ93079 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 IFI27L1Q96BM0 104 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST1H2BNQ99877 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 HIST1H2BMQ99879 126 aa1.66□□□□□ -2.14
PDLIM5-218ENST00000513341 FAM236AA0A1B0GUQ0 79 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 FAM236BA0A1B0GV22 79 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 H3BMG7 143 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 CCDC179H3BU77 68 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 IFITM1P13164 125 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 PLNP26678 52 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 SOSTDC1Q6X4U4 206 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 NAA38Q9BRA0 125 aaKnown RBP1.65□□□□□ -2.15
PDLIM5-218ENST00000513341 COLCA2A8K830 154 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 F8WEM9 126 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 TMEM256-PLSCR3K7ERE1 68 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 UQCRQO14949 82 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 LEPROTL1O95214 131 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 LINC01545Q5VT33 79 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 Q5VV11 94 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 ATOH7Q8N100 152 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 CLEC2BQ92478 149 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 RAB37Q96AX2 223 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 VAMP8Q9BV40 100 aa1.64□□□□□ -2.15
PDLIM5-218ENST00000513341 NHP2Q9NX24 153 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 545.7 ms