RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 A0A1B0GU69 56 aa1.81□□□□□ -2.12
LIG4-203ENST00000442234 IGLV1-51P01701 117 aa1.81□□□□□ -2.12
LIG4-203ENST00000442234 KLK9Q2XQG4 91 aa1.81□□□□□ -2.12
LIG4-203ENST00000442234 ASB16-AS1Q495Z4 193 aa1.81□□□□□ -2.12
LIG4-203ENST00000442234 C5orf56Q8N8D9 126 aa1.81□□□□□ -2.12
LIG4-203ENST00000442234 DNAH11Q96DT5 4516 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 A0A1W2PNM2 257 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 UNQ6190/PRO20217Q6UXQ8 127 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 KRTAP3-1Q9BYR8 98 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 UBR4Q5T4S7 5183 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 NUPR2A6NF83 97 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 ROMO1P60602 79 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 EGFEM1PQ0D2K5 195 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 Q8NBF4 154 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 MAP6D1Q9H9H5 199 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 A0A1B0GW54 56 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 DNAH10OSP0CZ25 163 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 LCE5AQ5TCM9 118 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 CHCHD10Q8WYQ3 142 aaPredicted RBP1.8□□□□□ -2.12
LIG4-203ENST00000442234 BIRC6Q9NR09 4857 aa1.8□□□□□ -2.12
LIG4-203ENST00000442234 UQCR11O14957 56 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 IGLV6-57P01721 117 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 DSCR10P59022 87 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 Q6ZR54 194 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 IGLV7-46A0A075B6I9 117 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 KRTAP16-1A8MUX0 517 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 IGKV2D-24A0A075B6R9 120 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 H3BUA1 57 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 CAMK2N2Q96S95 79 aa1.79□□□□□ -2.12
LIG4-203ENST00000442234 A0A087WSZ3 146 aa1.78□□□□□ -2.12
LIG4-203ENST00000442234 C4orf3Q8WVX3 66 aa1.78□□□□□ -2.12
LIG4-203ENST00000442234 IGKV2-24A0A0C4DH68 120 aa1.78□□□□□ -2.12
LIG4-203ENST00000442234 RPL37AP61513 92 aaKnown RBP1.78□□□□□ -2.12
LIG4-203ENST00000442234 CMC4P56277 68 aaPredicted RBP1.78□□□□□ -2.12
LIG4-203ENST00000442234 LCE4AQ5TA78 99 aa1.78□□□□□ -2.12
LIG4-203ENST00000442234 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
LIG4-203ENST00000442234 STARD9Q9P2P6 4700 aa1.78□□□□□ -2.12
LIG4-203ENST00000442234 KRTAP23-1A1A580 65 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 C7orf33Q8WU49 177 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 IGLV8-61A0A075B6I0 122 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 RTL8CO15255 209 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 Q8NDZ9 215 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 DNAH10Q8IVF4 4471 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 IGLV1-50A0A075B6I6 118 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 K7ERS5 55 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 CDK2AP2O75956 126 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 CNBPP62633 177 aaKnown RBP1.77□□□□□ -2.13
LIG4-203ENST00000442234 DHRS4-AS1Q9P1J3 65 aa1.77□□□□□ -2.13
LIG4-203ENST00000442234 DYNC1H1Q14204 4646 aaKnown RBP1.77□□□□□ -2.13
LIG4-203ENST00000442234 A8MWP4 228 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 SPART-AS1P0CW21 52 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 HRES1P13985 223 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 Q8N377 158 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 C9orf163Q8N9P6 203 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 C6orf48Q9UBA6 75 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 ACYP2P14621 99 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 KRTAP10-2P60368 255 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 SSBP3-AS1Q7Z2R9 100 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 C16orf74Q96GX8 76 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 KRTAP4-11Q9BYQ6 195 aa1.76□□□□□ -2.13
LIG4-203ENST00000442234 IGLV5-48A0A075B6I7 105 aa1.75□□□□□ -2.13
LIG4-203ENST00000442234 IGLV5-52A0A0A0MRZ9 124 aa1.75□□□□□ -2.13
LIG4-203ENST00000442234 Q5VSD8 79 aa1.75□□□□□ -2.13
LIG4-203ENST00000442234 A0A087X002 238 aa1.75□□□□□ -2.13
LIG4-203ENST00000442234 A0A1B0GUV1 79 aa1.75□□□□□ -2.13
LIG4-203ENST00000442234 NDUFAF8A1L188 74 aa1.75□□□□□ -2.13
LIG4-203ENST00000442234 RPL37AP8A6NKH3 93 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 LUZP6Q538Z0 58 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 TP53AIP1Q9HCN2 124 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 HERC1Q15751 4861 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 A0A096LNI7 61 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 A0A0G2JQZ4 141 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 A0A1W2PNN7 141 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 KRTAP25-1Q3LHN0 102 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 SPATA8Q6RVD6 105 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 SPRR4Q96PI1 79 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 PLAC8Q9NZF1 115 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
LIG4-203ENST00000442234 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
LIG4-203ENST00000442234 IGLV5-37A0A075B6J1 123 aa1.73□□□□□ -2.13
LIG4-203ENST00000442234 Q6ZRX8 168 aa1.73□□□□□ -2.13
LIG4-203ENST00000442234 IGFL1Q6UW32 110 aa1.72□□□□□ -2.13
LIG4-203ENST00000442234 KRTAP29-1A8MX34 341 aaPredicted RBP1.72□□□□□ -2.13
LIG4-203ENST00000442234 CHTF8P0CG12 524 aa1.72□□□□□ -2.13
LIG4-203ENST00000442234 LINC00483Q53H64 154 aa1.72□□□□□ -2.13
LIG4-203ENST00000442234 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
LIG4-203ENST00000442234 C20orf166-AS1Q96NR2 134 aa1.72□□□□□ -2.13
LIG4-203ENST00000442234 RNF213Q63HN8 5207 aa1.71□□□□□ -2.14
LIG4-203ENST00000442234 ZNF861PO60384 105 aa1.71□□□□□ -2.14
LIG4-203ENST00000442234 DNAH8Q96JB1 4490 aa1.71□□□□□ -2.14
LIG4-203ENST00000442234 GVQW2A0A096LPI5 108 aaPredicted RBP1.71□□□□□ -2.14
LIG4-203ENST00000442234 NBDYA0A0U1RRE5 68 aa1.71□□□□□ -2.14
LIG4-203ENST00000442234 A8MUU9 505 aa1.71□□□□□ -2.14
LIG4-203ENST00000442234 SPINK1P00995 79 aa1.71□□□□□ -2.14
LIG4-203ENST00000442234 TLX1NBP0CAT3 122 aa1.7□□□□□ -2.14
LIG4-203ENST00000442234 IGLV9-49A0A0B4J1Y8 123 aa1.7□□□□□ -2.14
LIG4-203ENST00000442234 C8orf17Q9NRJ1 99 aa1.7□□□□□ -2.14
LIG4-203ENST00000442234 P0C880 135 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms