RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
HERC1-213ENST00000561359 TRAV13-1A0A0B4J241 112 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 TRAV12-1A0A0B4J245 112 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 TRBV10-2A0A0K0K1G8 114 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 TLX1NBP0CAT3 122 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 PLNP26678 52 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 FCER1GP30273 86 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 PFN2P35080 140 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 IFI27P40305 119 aaPredicted RBP2.91□□□□□ -1.94
HERC1-213ENST00000561359 ATXN8Q156A1 80 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 ZC2HC1BQ5TFG8 222 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 COX8CQ7Z4L0 72 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 FMC1Q96HJ9 113 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 NDUFA12Q9UI09 145 aa2.91□□□□□ -1.94
HERC1-213ENST00000561359 A0A0U1RRA0 63 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 NDUFC2O95298 119 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 UBE2AP49459 152 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 FAM104BQ5XKR9 115 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 UNQ6190/PRO20217Q6UXQ8 127 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 SMIM29Q86T20 159 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 ORMDL3Q8N138 153 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 NXT2Q9NPJ8 142 aaKnown RBP2.9□□□□□ -1.95
HERC1-213ENST00000561359 LINC00846Q9NV44 126 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 PRO1854Q9UHT4 67 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 C22orf24Q9Y442 160 aa2.9□□□□□ -1.95
HERC1-213ENST00000561359 A0A0B4J2C4 111 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 PAPPA-AS1Q5QFB9 102 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 C9orf129Q5T035 196 aaKnown RBP2.89□□□□□ -1.95
HERC1-213ENST00000561359 SERP2Q8N6R1 65 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 Q8N8P6 123 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 TTTY13Q9BZ97 58 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 C6orf48Q9UBA6 75 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
HERC1-213ENST00000561359 TRBV30A0A0K0K1B3 111 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 FAM236DA0A1B0GTK5 79 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 hADV29S1A0JD25 119 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 D6R8Y8 96 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 K7EMI3 77 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 VCYO14598 125 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 FAM236CP0DP71 79 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 MRPS36P82909 103 aaKnown RBP2.88□□□□□ -1.95
HERC1-213ENST00000561359 FAM19A1Q7Z5A9 133 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 COPS9Q8WXC6 57 aa2.88□□□□□ -1.95
HERC1-213ENST00000561359 SMIM26A0A096LP01 95 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 TEX49A0A1B0GTD5 131 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 LOC389332A0A1B0GUA5 103 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 RPL37AP8A6NKH3 93 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 F8VRH5 84 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 NPC2P61916 151 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 MRPL51Q4U2R6 128 aaKnown RBP2.87□□□□□ -1.95
HERC1-213ENST00000561359 RNASE13Q5GAN3 156 aaKnown RBP2.87□□□□□ -1.95
HERC1-213ENST00000561359 C2orf82Q6UX34 121 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 MRPL55Q7Z7F7 128 aaKnown RBP2.87□□□□□ -1.95
HERC1-213ENST00000561359 LAMTOR3Q9UHA4 124 aa2.87□□□□□ -1.95
HERC1-213ENST00000561359 SDHAF1A6NFY7 115 aa2.86□□□□□ -1.95
HERC1-213ENST00000561359 CKS2P33552 79 aa2.86□□□□□ -1.95
HERC1-213ENST00000561359 HERVK_113P61574 105 aa2.86□□□□□ -1.95
HERC1-213ENST00000561359 CD164Q04900 197 aa2.86□□□□□ -1.95
HERC1-213ENST00000561359 RPL39LQ96EH5 51 aaKnown RBP2.86□□□□□ -1.95
HERC1-213ENST00000561359 DSCR8Q96T75 97 aa2.86□□□□□ -1.95
HERC1-213ENST00000561359 ZNF815PA8K554 130 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 I3L3M4 83 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 SPINK1P00995 79 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 Q75L30 129 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 Q8NBF4 154 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 CNFNQ9BYD5 112 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 XAGE1AQ9HD64 81 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 NEBP20929 6669 aa2.85□□□□□ -1.95
HERC1-213ENST00000561359 LST1O00453 97 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 ZNF22P17026 224 aaPredicted RBP2.84□□□□□ -1.95
HERC1-213ENST00000561359 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
HERC1-213ENST00000561359 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 Q6JHZ5 121 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 SFTA2Q6UW10 78 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 SCGB1D4Q6XE38 83 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 LINC01561Q8N1V8 128 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 LINC00167Q96N53 147 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 CYSTM1Q9H1C7 97 aa2.84□□□□□ -1.95
HERC1-213ENST00000561359 TMEM223A0PJW6 202 aa2.83□□□□□ -1.96
HERC1-213ENST00000561359 COX6CP09669 75 aa2.83□□□□□ -1.96
HERC1-213ENST00000561359 PRLHP81277 87 aa2.83□□□□□ -1.96
HERC1-213ENST00000561359 LYZL1Q6UWQ5 148 aa2.83□□□□□ -1.96
HERC1-213ENST00000561359 SMCR5Q8TEV8 140 aa2.83□□□□□ -1.96
HERC1-213ENST00000561359 MUC12Q9UKN1 5478 aa2.83□□□□□ -1.96
HERC1-213ENST00000561359 IGHV3OR16-9A0A0B4J2B5 98 aa2.82□□□□□ -1.96
HERC1-213ENST00000561359 KIAA0087Q14695 138 aa2.82□□□□□ -1.96
HERC1-213ENST00000561359 ORMDL2Q53FV1 153 aa2.82□□□□□ -1.96
HERC1-213ENST00000561359 PRR15Q8IV56 129 aa2.82□□□□□ -1.96
HERC1-213ENST00000561359 Q8N377 158 aa2.82□□□□□ -1.96
HERC1-213ENST00000561359 TOMM6Q96B49 74 aa2.82□□□□□ -1.96
HERC1-213ENST00000561359 TIMM21Q9BVV7 248 aa2.82□□□□□ -1.96
HERC1-213ENST00000561359 TRBV7-6A0A0J9YX20 115 aa2.81□□□□□ -1.96
HERC1-213ENST00000561359 C9orf92A6NGG3 77 aa2.81□□□□□ -1.96
HERC1-213ENST00000561359 C11orf86A6NJI1 115 aa2.81□□□□□ -1.96
HERC1-213ENST00000561359 SMKR1H3BMG3 65 aa2.81□□□□□ -1.96
HERC1-213ENST00000561359 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
HERC1-213ENST00000561359 BRK1Q8WUW1 75 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 294 ms