RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 SMR3AQ99954 134 aa8.5□□□□□ -1.05
C9orf78-205ENST00000480023 DEFB131BA0A096LNP1 70 aa8.49□□□□□ -1.05
C9orf78-205ENST00000480023 A8MWP4 228 aa8.49□□□□□ -1.05
C9orf78-205ENST00000480023 CASC10Q5T4H9 136 aa8.49□□□□□ -1.05
C9orf78-205ENST00000480023 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
C9orf78-205ENST00000480023 TENM1Q9UKZ4 2725 aa8.49□□□□□ -1.05
C9orf78-205ENST00000480023 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
C9orf78-205ENST00000480023 KTN1-AS1Q86SY8 53 aa8.48□□□□□ -1.05
C9orf78-205ENST00000480023 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
C9orf78-205ENST00000480023 LINC00472Q9H8W2 130 aa8.47□□□□□ -1.05
C9orf78-205ENST00000480023 IGLV7-46A0A075B6I9 117 aa8.46□□□□□ -1.06
C9orf78-205ENST00000480023 ITPR2Q14571 2701 aa8.46□□□□□ -1.06
C9orf78-205ENST00000480023 PRLHP81277 87 aa8.45□□□□□ -1.06
C9orf78-205ENST00000480023 LCA10Q71F78 164 aa8.45□□□□□ -1.06
C9orf78-205ENST00000480023 COA5Q86WW8 74 aa8.45□□□□□ -1.06
C9orf78-205ENST00000480023 SPRR1BP22528 89 aa8.44□□□□□ -1.06
C9orf78-205ENST00000480023 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
C9orf78-205ENST00000480023 F8P00451 2351 aa8.42□□□□□ -1.06
C9orf78-205ENST00000480023 MMP24-AS1A0A0U1RRL7 71 aa8.41□□□□□ -1.06
C9orf78-205ENST00000480023 TENM4Q6N022 2769 aa8.41□□□□□ -1.06
C9orf78-205ENST00000480023 A6NN06 94 aa8.4□□□□□ -1.06
C9orf78-205ENST00000480023 PHF5AQ7RTV0 110 aaKnown RBP8.4□□□□□ -1.06
C9orf78-205ENST00000480023 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.06
C9orf78-205ENST00000480023 DNAH1Q9P2D7 4330 aa8.4□□□□□ -1.07
C9orf78-205ENST00000480023 A6NED7 52 aa8.39□□□□□ -1.07
C9orf78-205ENST00000480023 H0Y9J4 135 aa8.39□□□□□ -1.07
C9orf78-205ENST00000480023 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
C9orf78-205ENST00000480023 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
C9orf78-205ENST00000480023 TRRAPQ9Y4A5 3859 aa8.39□□□□□ -1.07
C9orf78-205ENST00000480023 NDUFS5O43920 106 aa8.39□□□□□ -1.07
C9orf78-205ENST00000480023 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
C9orf78-205ENST00000480023 KRTAP10-11P60412 298 aa8.38□□□□□ -1.07
C9orf78-205ENST00000480023 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
C9orf78-205ENST00000480023 ATRQ13535 2644 aa8.38□□□□□ -1.07
C9orf78-205ENST00000480023 A0A096LNI7 61 aa8.38□□□□□ -1.07
C9orf78-205ENST00000480023 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
C9orf78-205ENST00000480023 LINC01558Q9Y6Z2 57 aa8.38□□□□□ -1.07
C9orf78-205ENST00000480023 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
C9orf78-205ENST00000480023 RBM12B-AS1Q9P1G2 102 aa8.36□□□□□ -1.07
C9orf78-205ENST00000480023 INAFM1C9JVW0 142 aa8.35□□□□□ -1.07
C9orf78-205ENST00000480023 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
C9orf78-205ENST00000480023 NSD1Q96L73 2696 aaPredicted RBP8.34□□□□□ -1.07
C9orf78-205ENST00000480023 Q6ZR54 194 aa8.33□□□□□ -1.08
C9orf78-205ENST00000480023 MOBPQ13875 183 aa8.32□□□□□ -1.08
C9orf78-205ENST00000480023 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
C9orf78-205ENST00000480023 BAHCC1Q9P281 2608 aa8.31□□□□□ -1.08
C9orf78-205ENST00000480023 FASNP49327 2511 aaKnown RBP8.31□□□□□ -1.08
C9orf78-205ENST00000480023 KRTAP11-1Q8IUC1 163 aa8.3□□□□□ -1.08
C9orf78-205ENST00000480023 PCOTHQ58A44 107 aa8.3□□□□□ -1.08
C9orf78-205ENST00000480023 Q96NJ1 140 aa8.29□□□□□ -1.08
C9orf78-205ENST00000480023 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
C9orf78-205ENST00000480023 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
C9orf78-205ENST00000480023 OTOGQ6ZRI0 2925 aa8.27□□□□□ -1.09
C9orf78-205ENST00000480023 HELZ2Q9BYK8 2649 aaKnown RBP8.27□□□□□ -1.09
C9orf78-205ENST00000480023 HRES1P13985 223 aa8.25□□□□□ -1.09
C9orf78-205ENST00000480023 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
C9orf78-205ENST00000480023 ANK2Q01484 3957 aa8.24□□□□□ -1.09
C9orf78-205ENST00000480023 TENM2Q9NT68 2774 aa8.23□□□□□ -1.09
C9orf78-205ENST00000480023 KMT2BQ9UMN6 2715 aaPredicted RBP8.23□□□□□ -1.09
C9orf78-205ENST00000480023 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
C9orf78-205ENST00000480023 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
C9orf78-205ENST00000480023 SPINK7P58062 85 aa8.22□□□□□ -1.09
C9orf78-205ENST00000480023 CHTF8P0CG12 524 aa8.2□□□□□ -1.1
C9orf78-205ENST00000480023 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
C9orf78-205ENST00000480023 A0A1B0GVX0 72 aa8.19□□□□□ -1.1
C9orf78-205ENST00000480023 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
C9orf78-205ENST00000480023 FLNBO75369 2602 aaKnown RBP8.18□□□□□ -1.1
C9orf78-205ENST00000480023 J3QKU1 62 aa8.17□□□□□ -1.1
C9orf78-205ENST00000480023 MRPL34Q9BQ48 92 aaKnown RBP8.17□□□□□ -1.1
C9orf78-205ENST00000480023 LINC00483Q53H64 154 aa8.15□□□□□ -1.11
C9orf78-205ENST00000480023 IGHV6-1A0A0B4J1U7 121 aa8.14□□□□□ -1.11
C9orf78-205ENST00000480023 MAST4O15021 2626 aa8.13□□□□□ -1.11
C9orf78-205ENST00000480023 DNAH3Q8TD57 4116 aa8.12□□□□□ -1.11
C9orf78-205ENST00000480023 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
C9orf78-205ENST00000480023 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
C9orf78-205ENST00000480023 CDK2AP2O75956 126 aa8.1□□□□□ -1.11
C9orf78-205ENST00000480023 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
C9orf78-205ENST00000480023 MDFIQ99750 246 aa8.09□□□□□ -1.11
C9orf78-205ENST00000480023 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
C9orf78-205ENST00000480023 A0A087X002 238 aa8.08□□□□□ -1.12
C9orf78-205ENST00000480023 NOTCH2NLQ7Z3S9 236 aa8.08□□□□□ -1.12
C9orf78-205ENST00000480023 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
C9orf78-205ENST00000480023 WWC2-AS2Q96NR7 200 aa8.06□□□□□ -1.12
C9orf78-205ENST00000480023 PANO1I0J062 215 aa8.06□□□□□ -1.12
C9orf78-205ENST00000480023 ACYP2P14621 99 aa8.05□□□□□ -1.12
C9orf78-205ENST00000480023 ZNF706Q9Y5V0 76 aaPredicted RBP8.05□□□□□ -1.12
C9orf78-205ENST00000480023 LYSTQ99698 3801 aa8.05□□□□□ -1.12
C9orf78-205ENST00000480023 LINC00313P59037 77 aa8.05□□□□□ -1.12
C9orf78-205ENST00000480023 HECTD1Q9ULT8 2610 aa8.04□□□□□ -1.12
C9orf78-205ENST00000480023 K7EIL1 84 aa8.04□□□□□ -1.12
C9orf78-205ENST00000480023 Q5W150 140 aa8.04□□□□□ -1.12
C9orf78-205ENST00000480023 DNAH9Q9NYC9 4486 aa8.03□□□□□ -1.12
C9orf78-205ENST00000480023 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
C9orf78-205ENST00000480023 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.13
C9orf78-205ENST00000480023 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
C9orf78-205ENST00000480023 DMAC1Q96GE9 116 aa8.02□□□□□ -1.13
C9orf78-205ENST00000480023 NOTCH1P46531 2555 aa8.02□□□□□ -1.13
C9orf78-205ENST00000480023 SPACA4Q8TDM5 124 aa8.01□□□□□ -1.13
C9orf78-205ENST00000480023 C8orf87E5RJ46 101 aa8□□□□□ -1.13
C9orf78-205ENST00000480023 UBE2DNLQ8IWF7 75 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms