RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 Q5XG85 94 aa3.74□□□□□ -1.81
PTPRD-206ENST00000397617 RETNLBQ9BQ08 111 aa3.74□□□□□ -1.81
PTPRD-206ENST00000397617 AKAP9Q99996 3911 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 FAM229BQ4G0N7 80 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 SPINK6Q6UWN8 80 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 ASB16-AS1Q495Z4 193 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 Q8NDZ9 215 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 MDFIQ99750 246 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 M0R2N4 97 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 KLKP1Q107X0 134 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 LY6G6CO95867 125 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 Q8N3U1 123 aa3.73□□□□□ -1.81
PTPRD-206ENST00000397617 A0A087WTM6 91 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 A0A096LNI7 61 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 SSBP3-AS1Q7Z2R9 100 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 PRR15Q8IV56 129 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 SLPIP03973 132 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 C1orf137Q5JT78 98 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 TMEM254Q8TBM7 123 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 Q8N377 158 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 KRTAP1-5Q9BYS1 174 aa3.72□□□□□ -1.81
PTPRD-206ENST00000397617 IGLV5-52A0A0A0MRZ9 124 aa3.71□□□□□ -1.81
PTPRD-206ENST00000397617 ATP11AUNQ6ZP68 121 aa3.71□□□□□ -1.81
PTPRD-206ENST00000397617 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.71□□□□□ -1.82
PTPRD-206ENST00000397617 C8orf87E5RJ46 101 aa3.71□□□□□ -1.82
PTPRD-206ENST00000397617 C1orf134Q5TEV5 83 aa3.71□□□□□ -1.82
PTPRD-206ENST00000397617 LINC00483Q53H64 154 aa3.71□□□□□ -1.82
PTPRD-206ENST00000397617 Q6ZSA8 131 aa3.7□□□□□ -1.82
PTPRD-206ENST00000397617 WFDC13Q8IUB5 93 aa3.7□□□□□ -1.82
PTPRD-206ENST00000397617 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
PTPRD-206ENST00000397617 SCXQ7RTU7 201 aa3.7□□□□□ -1.82
PTPRD-206ENST00000397617 SERTAD4-AS1Q5TG53 156 aa3.69□□□□□ -1.82
PTPRD-206ENST00000397617 LINC00476Q8WZB0 136 aa3.69□□□□□ -1.82
PTPRD-206ENST00000397617 SRRM2Q9UQ35 2752 aaKnown RBP3.69□□□□□ -1.82
PTPRD-206ENST00000397617 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
PTPRD-206ENST00000397617 SMCR5Q8TEV8 140 aa3.69□□□□□ -1.82
PTPRD-206ENST00000397617 HRCT1Q6UXD1 115 aa3.68□□□□□ -1.82
PTPRD-206ENST00000397617 MPLKIPQ8TAP9 179 aa3.68□□□□□ -1.82
PTPRD-206ENST00000397617 LCE6AA0A183 80 aa3.68□□□□□ -1.82
PTPRD-206ENST00000397617 ZNF861PO60384 105 aa3.68□□□□□ -1.82
PTPRD-206ENST00000397617 RPS29P62273 56 aaKnown RBP3.67□□□□□ -1.82
PTPRD-206ENST00000397617 PRB2P02812 416 aaPredicted RBP3.67□□□□□ -1.82
PTPRD-206ENST00000397617 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
PTPRD-206ENST00000397617 IGLV9-49A0A0B4J1Y8 123 aa3.67□□□□□ -1.82
PTPRD-206ENST00000397617 LINC00208Q96KT6 92 aa3.67□□□□□ -1.82
PTPRD-206ENST00000397617 FAM229AH3BQW9 127 aa3.67□□□□□ -1.82
PTPRD-206ENST00000397617 Q9BRP9 147 aa3.67□□□□□ -1.82
PTPRD-206ENST00000397617 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
PTPRD-206ENST00000397617 MOBPQ13875 183 aa3.66□□□□□ -1.82
PTPRD-206ENST00000397617 C7orf65Q6ZTY9 151 aa3.66□□□□□ -1.82
PTPRD-206ENST00000397617 LCA10Q71F78 164 aa3.66□□□□□ -1.82
PTPRD-206ENST00000397617 KRTAP7-1Q8IUC3 87 aa3.65□□□□□ -1.82
PTPRD-206ENST00000397617 CIRBP-AS1Q8TBR5 109 aa3.65□□□□□ -1.82
PTPRD-206ENST00000397617 A0A1W2PNM2 257 aa3.65□□□□□ -1.83
PTPRD-206ENST00000397617 IGHV6-1A0A0B4J1U7 121 aa3.64□□□□□ -1.83
PTPRD-206ENST00000397617 ACYP2P14621 99 aa3.64□□□□□ -1.83
PTPRD-206ENST00000397617 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
PTPRD-206ENST00000397617 A0A087X002 238 aa3.64□□□□□ -1.83
PTPRD-206ENST00000397617 VPS13CQ709C8 3753 aa3.63□□□□□ -1.83
PTPRD-206ENST00000397617 ANK2Q01484 3957 aa3.63□□□□□ -1.83
PTPRD-206ENST00000397617 PLA2G1BP04054 148 aaKnown RBP3.63□□□□□ -1.83
PTPRD-206ENST00000397617 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 A0A087WSZ3 146 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 H0Y9P7 68 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 OCR1Q9BZK8 76 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 RTL8CO15255 209 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 Q1T7F1 81 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 CASC10Q5T4H9 136 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 DNAH3Q8TD57 4116 aa3.62□□□□□ -1.83
PTPRD-206ENST00000397617 A0A1W2PNN7 141 aa3.61□□□□□ -1.83
PTPRD-206ENST00000397617 LOC101927531A0A1B0GV80 90 aa3.61□□□□□ -1.83
PTPRD-206ENST00000397617 A8MWP4 228 aa3.61□□□□□ -1.83
PTPRD-206ENST00000397617 IGFL1Q6UW32 110 aa3.6□□□□□ -1.83
PTPRD-206ENST00000397617 SNURFQ9Y675 71 aa3.6□□□□□ -1.83
PTPRD-206ENST00000397617 A0A1B0GU69 56 aa3.6□□□□□ -1.83
PTPRD-206ENST00000397617 IGLV7-43P04211 117 aa3.59□□□□□ -1.83
PTPRD-206ENST00000397617 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.83
PTPRD-206ENST00000397617 CUBNO60494 3623 aa3.59□□□□□ -1.83
PTPRD-206ENST00000397617 UQCR11O14957 56 aa3.59□□□□□ -1.84
PTPRD-206ENST00000397617 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
PTPRD-206ENST00000397617 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
PTPRD-206ENST00000397617 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
PTPRD-206ENST00000397617 DSCR10P59022 87 aa3.58□□□□□ -1.84
PTPRD-206ENST00000397617 CHTF8P0CG12 524 aa3.57□□□□□ -1.84
PTPRD-206ENST00000397617 IGKV2D-30A0A075B6S6 120 aa3.57□□□□□ -1.84
PTPRD-206ENST00000397617 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
PTPRD-206ENST00000397617 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
PTPRD-206ENST00000397617 PRR4Q16378 134 aa3.57□□□□□ -1.84
PTPRD-206ENST00000397617 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
PTPRD-206ENST00000397617 PRLHP81277 87 aa3.57□□□□□ -1.84
PTPRD-206ENST00000397617 SPINK1P00995 79 aa3.56□□□□□ -1.84
PTPRD-206ENST00000397617 J3QL48 77 aa3.55□□□□□ -1.84
PTPRD-206ENST00000397617 CDC42SE1Q9NRR8 79 aa3.55□□□□□ -1.84
PTPRD-206ENST00000397617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.55□□□□□ -1.84
PTPRD-206ENST00000397617 H7BZZ5 65 aa3.54□□□□□ -1.84
PTPRD-206ENST00000397617 LINC00313P59037 77 aa3.54□□□□□ -1.84
PTPRD-206ENST00000397617 PHF5AQ7RTV0 110 aaKnown RBP3.54□□□□□ -1.84
PTPRD-206ENST00000397617 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms