RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 OXTP01178 125 aa7.3□□□□□ -1.24
VPS8-227ENST00000625842 OBSCN-AS1Q96MR7 158 aa7.3□□□□□ -1.24
VPS8-227ENST00000625842 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
VPS8-227ENST00000625842 LOC110117498A0A087WWA1 95 aa7.27□□□□□ -1.25
VPS8-227ENST00000625842 CD164Q04900 197 aa7.27□□□□□ -1.25
VPS8-227ENST00000625842 LINC01546A6NGU7 62 aa7.27□□□□□ -1.25
VPS8-227ENST00000625842 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
VPS8-227ENST00000625842 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
VPS8-227ENST00000625842 C15orf56Q8N910 161 aa7.25□□□□□ -1.25
VPS8-227ENST00000625842 A0A1B0GVX0 72 aa7.24□□□□□ -1.25
VPS8-227ENST00000625842 SERTAD4-AS1Q5TG53 156 aa7.23□□□□□ -1.25
VPS8-227ENST00000625842 FAM168BA1KXE4 195 aa7.23□□□□□ -1.25
VPS8-227ENST00000625842 DSCR10P59022 87 aa7.22□□□□□ -1.25
VPS8-227ENST00000625842 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
VPS8-227ENST00000625842 LINC00846Q9NV44 126 aa7.21□□□□□ -1.25
VPS8-227ENST00000625842 URB1-AS1Q96HZ7 61 aa7.21□□□□□ -1.26
VPS8-227ENST00000625842 Q5VSD8 79 aa7.2□□□□□ -1.26
VPS8-227ENST00000625842 COL27A1Q8IZC6 1860 aaPredicted RBP7.19□□□□□ -1.26
VPS8-227ENST00000625842 Q6ZQT0 140 aa7.19□□□□□ -1.26
VPS8-227ENST00000625842 YPEL4Q96NS1 127 aa7.19□□□□□ -1.26
VPS8-227ENST00000625842 A0A096LNJ9 63 aa7.19□□□□□ -1.26
VPS8-227ENST00000625842 A0A087WVE0 104 aa7.19□□□□□ -1.26
VPS8-227ENST00000625842 HRES1P13985 223 aa7.19□□□□□ -1.26
VPS8-227ENST00000625842 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
VPS8-227ENST00000625842 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
VPS8-227ENST00000625842 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
VPS8-227ENST00000625842 PMAIP1Q13794 54 aa7.16□□□□□ -1.26
VPS8-227ENST00000625842 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
VPS8-227ENST00000625842 PRR26Q8N8Z3 221 aa7.14□□□□□ -1.27
VPS8-227ENST00000625842 A0A1W2PNN7 141 aa7.13□□□□□ -1.27
VPS8-227ENST00000625842 C9orf129Q5T035 196 aaKnown RBP7.13□□□□□ -1.27
VPS8-227ENST00000625842 LINC01600Q96MT4 127 aa7.12□□□□□ -1.27
VPS8-227ENST00000625842 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
VPS8-227ENST00000625842 SOSTDC1Q6X4U4 206 aa7.11□□□□□ -1.27
VPS8-227ENST00000625842 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
VPS8-227ENST00000625842 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
VPS8-227ENST00000625842 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
VPS8-227ENST00000625842 BAHCC1Q9P281 2608 aa7.1□□□□□ -1.27
VPS8-227ENST00000625842 UQCR11O14957 56 aa7.09□□□□□ -1.27
VPS8-227ENST00000625842 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
VPS8-227ENST00000625842 K7EQZ3 153 aa7.09□□□□□ -1.28
VPS8-227ENST00000625842 WDR87Q6ZQQ6 2873 aa7.08□□□□□ -1.28
VPS8-227ENST00000625842 FLNAP21333 2647 aaKnown RBP7.08□□□□□ -1.28
VPS8-227ENST00000625842 PSPHP1O15172 72 aa7.08□□□□□ -1.28
VPS8-227ENST00000625842 ITPR3Q14573 2671 aa7.07□□□□□ -1.28
VPS8-227ENST00000625842 A8MUN3 132 aa7.06□□□□□ -1.28
VPS8-227ENST00000625842 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
VPS8-227ENST00000625842 LINC00310P59036 64 aa7.05□□□□□ -1.28
VPS8-227ENST00000625842 Q8N377 158 aa7.03□□□□□ -1.28
VPS8-227ENST00000625842 ERC2-IT1O76042 136 aa7.03□□□□□ -1.28
VPS8-227ENST00000625842 CFAP46Q8IYW2 2715 aa7.03□□□□□ -1.28
VPS8-227ENST00000625842 IGLV8-61A0A075B6I0 122 aa7.02□□□□□ -1.29
VPS8-227ENST00000625842 IGLV5-48A0A075B6I7 105 aa7.02□□□□□ -1.29
VPS8-227ENST00000625842 C1orf195Q5TG92 126 aa7.02□□□□□ -1.29
VPS8-227ENST00000625842 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
VPS8-227ENST00000625842 FAM218AQ96MZ4 157 aa7.01□□□□□ -1.29
VPS8-227ENST00000625842 TEP1Q99973 2627 aaKnown RBP7□□□□□ -1.29
VPS8-227ENST00000625842 LINC00483Q53H64 154 aa7□□□□□ -1.29
VPS8-227ENST00000625842 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
VPS8-227ENST00000625842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
VPS8-227ENST00000625842 NOTCH1P46531 2555 aa6.99□□□□□ -1.29
VPS8-227ENST00000625842 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
VPS8-227ENST00000625842 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
VPS8-227ENST00000625842 PCSK5Q92824 1860 aa6.97□□□□□ -1.29
VPS8-227ENST00000625842 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
VPS8-227ENST00000625842 PLAC4Q8WY50 150 aa6.94□□□□□ -1.3
VPS8-227ENST00000625842 COA5Q86WW8 74 aa6.94□□□□□ -1.3
VPS8-227ENST00000625842 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
VPS8-227ENST00000625842 ZCCHC13Q8WW36 166 aaKnown RBP6.92□□□□□ -1.3
VPS8-227ENST00000625842 LITAFQ99732 161 aa6.92□□□□□ -1.3
VPS8-227ENST00000625842 COL6A5A8TX70 2615 aa6.91□□□□□ -1.3
VPS8-227ENST00000625842 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
VPS8-227ENST00000625842 Q8N1X5 172 aa6.9□□□□□ -1.31
VPS8-227ENST00000625842 S4R3F8 94 aa6.9□□□□□ -1.31
VPS8-227ENST00000625842 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
VPS8-227ENST00000625842 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
VPS8-227ENST00000625842 R4GN34 69 aa6.87□□□□□ -1.31
VPS8-227ENST00000625842 EP400Q96L91 3159 aa6.87□□□□□ -1.31
VPS8-227ENST00000625842 LUZP6Q538Z0 58 aa6.86□□□□□ -1.31
VPS8-227ENST00000625842 A0A0D9SG42 100 aa6.85□□□□□ -1.31
VPS8-227ENST00000625842 Q6ZR54 194 aa6.84□□□□□ -1.32
VPS8-227ENST00000625842 A0A1W2PNM2 257 aa6.82□□□□□ -1.32
VPS8-227ENST00000625842 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
VPS8-227ENST00000625842 SPRR1BP22528 89 aa6.8□□□□□ -1.32
VPS8-227ENST00000625842 SPINK7P58062 85 aa6.79□□□□□ -1.32
VPS8-227ENST00000625842 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
VPS8-227ENST00000625842 UNC79Q9P2D8 2635 aa6.77□□□□□ -1.33
VPS8-227ENST00000625842 A0A0G2JQZ4 141 aa6.76□□□□□ -1.33
VPS8-227ENST00000625842 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
VPS8-227ENST00000625842 RPS28P62857 69 aaKnown RBP6.75□□□□□ -1.33
VPS8-227ENST00000625842 TEX15Q9BXT5 2789 aa6.75□□□□□ -1.33
VPS8-227ENST00000625842 A0A1B0GU33 70 aa6.74□□□□□ -1.33
VPS8-227ENST00000625842 DMAC1Q96GE9 116 aa6.74□□□□□ -1.33
VPS8-227ENST00000625842 SPRR1AP35321 89 aa6.74□□□□□ -1.33
VPS8-227ENST00000625842 RPS29P62273 56 aaKnown RBP6.73□□□□□ -1.33
VPS8-227ENST00000625842 NBEAL1Q6ZS30 2694 aa6.73□□□□□ -1.33
VPS8-227ENST00000625842 H7BZZ5 65 aa6.73□□□□□ -1.33
VPS8-227ENST00000625842 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
VPS8-227ENST00000625842 LCA10Q71F78 164 aa6.71□□□□□ -1.34
VPS8-227ENST00000625842 BPTFQ12830 3046 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms