RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 Q8N2B8 174 aa4.16□□□□□ -1.74
CNOT1-211ENST00000567188 LOC400499M0QZD8 3231 aa4.16□□□□□ -1.74
CNOT1-211ENST00000567188 KIF25-AS1Q9Y6Z4 181 aa4.16□□□□□ -1.74
CNOT1-211ENST00000567188 CFAP47Q6ZTR5 3102 aa4.16□□□□□ -1.74
CNOT1-211ENST00000567188 CCDC168Q8NDH2 2452 aa4.16□□□□□ -1.74
CNOT1-211ENST00000567188 ZFYVE26Q68DK2 2539 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 CSNK1G2-AS1Q8NCQ2 148 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 FAM218AQ96MZ4 157 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 IGKV2D-30A0A075B6S6 120 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 IGKV2-30P06310 120 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 CSMD2Q7Z408 3487 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 SVEP1Q4LDE5 3571 aa4.15□□□□□ -1.74
CNOT1-211ENST00000567188 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
CNOT1-211ENST00000567188 LINC00483Q53H64 154 aa4.15□□□□□ -1.75
CNOT1-211ENST00000567188 SPACA4Q8TDM5 124 aa4.15□□□□□ -1.75
CNOT1-211ENST00000567188 CR1P17927 2039 aa4.15□□□□□ -1.75
CNOT1-211ENST00000567188 IGF2RP11717 2491 aa4.15□□□□□ -1.75
CNOT1-211ENST00000567188 PCOTHQ58A44 107 aa4.14□□□□□ -1.75
CNOT1-211ENST00000567188 OBSCN-AS1Q96MR7 158 aa4.14□□□□□ -1.75
CNOT1-211ENST00000567188 TLN2Q9Y4G6 2542 aa4.14□□□□□ -1.75
CNOT1-211ENST00000567188 IGLV1-51P01701 117 aa4.14□□□□□ -1.75
CNOT1-211ENST00000567188 RPL37AP61513 92 aaKnown RBP4.13□□□□□ -1.75
CNOT1-211ENST00000567188 FN1P02751 2386 aaKnown RBP4.13□□□□□ -1.75
CNOT1-211ENST00000567188 C6orf48Q9UBA6 75 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 ABCA12Q86UK0 2595 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 USP9XQ93008 2570 aaPredicted RBP4.12□□□□□ -1.75
CNOT1-211ENST00000567188 LINC00588Q9Y4M8 146 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 Q8NBF4 154 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 PHF5AQ7RTV0 110 aaKnown RBP4.12□□□□□ -1.75
CNOT1-211ENST00000567188 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 LINC00167Q96N53 147 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 PSORS1C2Q9UIG4 136 aa4.12□□□□□ -1.75
CNOT1-211ENST00000567188 COX6A2Q02221 97 aa4.11□□□□□ -1.75
CNOT1-211ENST00000567188 MOBPQ13875 183 aa4.11□□□□□ -1.75
CNOT1-211ENST00000567188 CRIPTQ9P021 101 aa4.11□□□□□ -1.75
CNOT1-211ENST00000567188 ODF3L2Q3SX64 289 aa4.11□□□□□ -1.75
CNOT1-211ENST00000567188 Q6ZSN1 163 aa4.11□□□□□ -1.75
CNOT1-211ENST00000567188 NOTCH2Q04721 2471 aa4.11□□□□□ -1.75
CNOT1-211ENST00000567188 EIF4EBP3O60516 100 aaPredicted RBP4.11□□□□□ -1.75
CNOT1-211ENST00000567188 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
CNOT1-211ENST00000567188 H3BNG1 76 aa4.1□□□□□ -1.75
CNOT1-211ENST00000567188 LINC00315P59091 139 aa4.1□□□□□ -1.75
CNOT1-211ENST00000567188 LYPD5Q6UWN5 251 aa4.1□□□□□ -1.75
CNOT1-211ENST00000567188 DOPEY1Q5JWR5 2465 aa4.09□□□□□ -1.75
CNOT1-211ENST00000567188 NCOR2Q9Y618 2525 aa4.09□□□□□ -1.75
CNOT1-211ENST00000567188 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
CNOT1-211ENST00000567188 A0A087WSZ3 146 aa4.09□□□□□ -1.75
CNOT1-211ENST00000567188 ANK2Q01484 3957 aa4.09□□□□□ -1.75
CNOT1-211ENST00000567188 Q6ZRP5 223 aa4.08□□□□□ -1.76
CNOT1-211ENST00000567188 A0A087X002 238 aa4.08□□□□□ -1.76
CNOT1-211ENST00000567188 LINC01558Q9Y6Z2 57 aa4.08□□□□□ -1.76
CNOT1-211ENST00000567188 USP9YO00507 2555 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-211ENST00000567188 AKAP13Q12802 2813 aa4.08□□□□□ -1.76
CNOT1-211ENST00000567188 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
CNOT1-211ENST00000567188 A8MWP4 228 aa4.08□□□□□ -1.76
CNOT1-211ENST00000567188 K7EIL1 84 aa4.07□□□□□ -1.76
CNOT1-211ENST00000567188 SPTBN4Q9H254 2564 aa4.07□□□□□ -1.76
CNOT1-211ENST00000567188 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
CNOT1-211ENST00000567188 ZNF469Q96JG9 3925 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-211ENST00000567188 IGLV5-37A0A075B6J1 123 aa4.06□□□□□ -1.76
CNOT1-211ENST00000567188 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
CNOT1-211ENST00000567188 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
CNOT1-211ENST00000567188 APLNQ9ULZ1 77 aa4.05□□□□□ -1.76
CNOT1-211ENST00000567188 EPM2AB3EWF7 344 aa4.05□□□□□ -1.76
CNOT1-211ENST00000567188 LINC00313P59037 77 aa4.04□□□□□ -1.76
CNOT1-211ENST00000567188 GVQW2A0A096LPI5 108 aaPredicted RBP4.04□□□□□ -1.76
CNOT1-211ENST00000567188 SETD2Q9BYW2 2564 aaPredicted RBP4.04□□□□□ -1.76
CNOT1-211ENST00000567188 A0A0C4DFX4 3053 aa4.04□□□□□ -1.76
CNOT1-211ENST00000567188 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
CNOT1-211ENST00000567188 PKD1L2Q7Z442 2459 aa4.03□□□□□ -1.76
CNOT1-211ENST00000567188 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
CNOT1-211ENST00000567188 KCNQ1DNQ9H478 68 aa4.03□□□□□ -1.76
CNOT1-211ENST00000567188 CEP295Q9C0D2 2601 aa4.03□□□□□ -1.76
CNOT1-211ENST00000567188 HRES1P13985 223 aa4.03□□□□□ -1.76
CNOT1-211ENST00000567188 Q96NJ1 140 aa4.03□□□□□ -1.76
CNOT1-211ENST00000567188 C8orf17Q9NRJ1 99 aa4.03□□□□□ -1.76
CNOT1-211ENST00000567188 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
CNOT1-211ENST00000567188 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
CNOT1-211ENST00000567188 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-211ENST00000567188 IGLV6-57P01721 117 aa4.02□□□□□ -1.77
CNOT1-211ENST00000567188 F8P00451 2351 aa4.01□□□□□ -1.77
CNOT1-211ENST00000567188 BOD1L1Q8NFC6 3051 aa4.01□□□□□ -1.77
CNOT1-211ENST00000567188 A8MTW9 85 aa4.01□□□□□ -1.77
CNOT1-211ENST00000567188 PRR3P79522 188 aaKnown RBP4.01□□□□□ -1.77
CNOT1-211ENST00000567188 Q5VV11 94 aa4.01□□□□□ -1.77
CNOT1-211ENST00000567188 CAMK2N1Q7Z7J9 78 aa4.01□□□□□ -1.77
CNOT1-211ENST00000567188 RTL8CO15255 209 aa4.01□□□□□ -1.77
CNOT1-211ENST00000567188 OXTP01178 125 aa4.01□□□□□ -1.77
CNOT1-211ENST00000567188 ATMQ13315 3056 aa4□□□□□ -1.77
CNOT1-211ENST00000567188 Q6ZRX8 168 aa4□□□□□ -1.77
CNOT1-211ENST00000567188 PRRC2CQ9Y520 2896 aaKnown RBP4□□□□□ -1.77
CNOT1-211ENST00000567188 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
CNOT1-211ENST00000567188 C22orf24Q9Y442 160 aa3.99□□□□□ -1.77
CNOT1-211ENST00000567188 Q6ZSA8 131 aa3.99□□□□□ -1.77
CNOT1-211ENST00000567188 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
CNOT1-211ENST00000567188 K7EQZ3 153 aa3.98□□□□□ -1.77
CNOT1-211ENST00000567188 C9orf163Q8N9P6 203 aa3.98□□□□□ -1.77
CNOT1-211ENST00000567188 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms