RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 ST20Q9HBF5 79 aa1.88□□□□□ -2.11
ATXN3-234ENST00000555958 TRBV20OR9-2A0A075B6H5 130 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 F2Z2F3 143 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 FCER1GP30273 86 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 POLR2KP53803 58 aaKnown RBP1.87□□□□□ -2.11
ATXN3-234ENST00000555958 RAB5BP61020 215 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 CCL20P78556 96 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 AKR1C8PQ5T2L2 129 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 C9orf62Q8N4C0 152 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 FAM213BQ8TBF2 198 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 SFT2D1Q8WV19 159 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 PACRGQ96M98 296 aaPredicted RBP1.87□□□□□ -2.11
ATXN3-234ENST00000555958 NKX6-2Q9C056 277 aaPredicted RBP1.87□□□□□ -2.11
ATXN3-234ENST00000555958 BATF3Q9NR55 127 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
ATXN3-234ENST00000555958 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
ATXN3-234ENST00000555958 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 TRBV30A0A0K0K1B3 111 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 IGLV6-57P01721 117 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 RPS20P60866 119 aaKnown RBP1.86□□□□□ -2.11
ATXN3-234ENST00000555958 KCNRGQ8N5I3 272 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 SPRR4Q96PI1 79 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 CCDC32Q9BV29 185 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 GNG13Q9P2W3 67 aa1.86□□□□□ -2.11
ATXN3-234ENST00000555958 FXYD6-FXYD2A0A087WZ82 144 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 TRBV27A0A0K0K1C4 114 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 A0A1B0GVG6 124 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 A6NED7 52 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 PFDN1O60925 122 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 MT2AP02795 61 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 MT1FP04733 61 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 GNG4P50150 75 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 SMAGPQ0VAQ4 97 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 PDZD11Q5EBL8 140 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 SPAG11AQ6PDA7 123 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 SMIM15Q7Z3B0 74 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 FAM19A3Q7Z5A8 133 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 Q8NDZ9 215 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 TMEM126AQ9H061 195 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 MED9Q9NWA0 146 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 KMT2DO14686 5537 aa1.85□□□□□ -2.11
ATXN3-234ENST00000555958 TGIF2-C20orf24A0A0A6YYL0 155 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 BORCS7-ASMTA0A0B4J1R7 106 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 A0A0B4J2C4 111 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 C8orf87E5RJ46 101 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 TMEM250H0YL14 139 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 M0R378 163 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 S100A1P23297 94 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 CKS1BP61024 79 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 HBBP68871 147 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 HRCT1Q6UXD1 115 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 TMEM136Q6ZRR5 245 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 TP73-AS1Q9UF72 201 aa1.84□□□□□ -2.11
ATXN3-234ENST00000555958 SPINK1P00995 79 aa1.83□□□□□ -2.12
ATXN3-234ENST00000555958 LINC00614P0C842 121 aa1.83□□□□□ -2.12
ATXN3-234ENST00000555958 MRPL51Q4U2R6 128 aaKnown RBP1.83□□□□□ -2.12
ATXN3-234ENST00000555958 TEX261Q6UWH6 196 aa1.83□□□□□ -2.12
ATXN3-234ENST00000555958 SLC51BQ86UW2 128 aa1.83□□□□□ -2.12
ATXN3-234ENST00000555958 MBD3L1Q8WWY6 194 aa1.83□□□□□ -2.12
ATXN3-234ENST00000555958 TCEAL7Q9BRU2 100 aa1.83□□□□□ -2.12
ATXN3-234ENST00000555958 EIF5A2Q9GZV4 153 aaKnown RBP1.83□□□□□ -2.12
ATXN3-234ENST00000555958 NDUFA12Q9UI09 145 aa1.83□□□□□ -2.12
ATXN3-234ENST00000555958 F8VRH5 84 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 H3BQ85 93 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 ARPC5O15511 151 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 SCGB1D4Q6XE38 83 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 SMCR5Q8TEV8 140 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 TIMM21Q9BVV7 248 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 TMEM191AQ9H0A3 160 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 CDKN2A-AS1Q9UH64 79 aa1.82□□□□□ -2.12
ATXN3-234ENST00000555958 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
ATXN3-234ENST00000555958 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 A0A1B0GV72 72 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 LOC105371267A0A1B0GV96 52 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 A8MWP4 228 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 SLC25A20O43772 301 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 MRPS36P82909 103 aaKnown RBP1.81□□□□□ -2.12
ATXN3-234ENST00000555958 C4orf26Q17RF5 130 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 ADM2Q7Z4H4 148 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 Q8IZM0 81 aa1.81□□□□□ -2.12
ATXN3-234ENST00000555958 TRBV24-1A0A075B6N3 115 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 A0A1B0GUT8 65 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 TINCRA0A1B0GVN0 87 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 HIGD1CA8MV81 97 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 H7C2G1 150 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 NPYP01303 97 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 SPINK8P0C7L1 97 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 G0S2P27469 103 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 C9orf153Q5TBE3 101 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 ZNF625Q96I27 306 aaPredicted RBP1.8□□□□□ -2.12
ATXN3-234ENST00000555958 TMEM141Q96I45 108 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 SMIM2Q9BVW6 85 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 SPANXA1Q9NS26 97 aa1.8□□□□□ -2.12
ATXN3-234ENST00000555958 D6R8Y8 96 aa1.79□□□□□ -2.12
ATXN3-234ENST00000555958 CKS2P33552 79 aa1.79□□□□□ -2.12
ATXN3-234ENST00000555958 IFI27P40305 119 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms