RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TRBV20-1A0A075B6N2 111 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 TRAV9-1A0A075B6T8 112 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 KANTRA0A1W2PQU2 76 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 D6R8Y8 96 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 F8W036 122 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 MT1FP04733 61 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 S100A8P05109 93 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 G0S2P27469 103 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 PFN2P35080 140 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 SPRR1AP35321 89 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 CEND1Q8N111 149 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 NAT8BQ9UHF3 227 aa2.09□□□□□ -2.07
SNHG1-220ENST00000544550 TINCRA0A1B0GVN0 87 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 HMSDA8MTL9 139 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 TMEM250H0YL14 139 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 K7EMI3 77 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 NPYP01303 97 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 LGALS3P17931 250 aaKnown RBP2.08□□□□□ -2.08
SNHG1-220ENST00000544550 IFITM3Q01628 133 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 ORMDL2Q53FV1 153 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 SLC25A34Q6PIV7 304 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 SFTA2Q6UW10 78 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 ATP11AUNQ6ZP68 121 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 ORMDL3Q8N138 153 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 KCNQ1DNQ9H478 68 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 OSTCQ9NRP0 149 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 ERG28Q9UKR5 140 aa2.08□□□□□ -2.08
SNHG1-220ENST00000544550 CHTOPQ9Y3Y2 248 aaKnown RBP2.08□□□□□ -2.08
SNHG1-220ENST00000544550 LOC389332A0A1B0GUA5 103 aa2.07□□□□□ -2.08
SNHG1-220ENST00000544550 IGIPA6NJ69 53 aa2.07□□□□□ -2.08
SNHG1-220ENST00000544550 H3BRM9 83 aa2.07□□□□□ -2.08
SNHG1-220ENST00000544550 C6orf99Q4VX62 202 aa2.07□□□□□ -2.08
SNHG1-220ENST00000544550 MAP1LC3AQ9H492 121 aa2.07□□□□□ -2.08
SNHG1-220ENST00000544550 LAMTOR2Q9Y2Q5 125 aa2.07□□□□□ -2.08
SNHG1-220ENST00000544550 SPINK8P0C7L1 97 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 CD164Q04900 197 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 JOSD1Q15040 202 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-220ENST00000544550 C10orf91Q5T1B1 145 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 Q5XG85 94 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 UQCC3Q6UW78 93 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 HRCT1Q6UXD1 115 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 TMEM136Q6ZRR5 245 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 V9GYV3 84 aa2.06□□□□□ -2.08
SNHG1-220ENST00000544550 LINC01549A6NIU2 74 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 ERC2-IT1O76042 136 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 CEBPGP53567 150 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 ALKAL2Q6UX46 152 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 Q6ZRX8 168 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 Q8N8P6 123 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 Q8NDZ9 215 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 SMIM7Q9BQ49 75 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 NEBP20929 6669 aa2.05□□□□□ -2.08
SNHG1-220ENST00000544550 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 SMIM27A0A1W2PRY6 76 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 H7C2G1 150 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 LINC00158P58513 81 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 RPL23P62829 140 aaKnown RBP2.04□□□□□ -2.08
SNHG1-220ENST00000544550 C1orf195Q5TG92 126 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 TOMM6Q96B49 74 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 C20orf166-AS1Q96NR2 134 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 Q9BRP9 147 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 NXT2Q9NPJ8 142 aaKnown RBP2.04□□□□□ -2.08
SNHG1-220ENST00000544550 LAMTOR3Q9UHA4 124 aa2.04□□□□□ -2.08
SNHG1-220ENST00000544550 TRBV10-3A0A0K0K1G6 114 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 FAM236DA0A1B0GTK5 79 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 A0A1B0GXF2 115 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 NCR3O14931 201 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 FAM236CP0DP71 79 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 PMVKQ15126 192 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 MRPL54Q6P161 138 aaKnown RBP2.03□□□□□ -2.08
SNHG1-220ENST00000544550 FA2HQ7L5A8 372 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 ATP5L2Q7Z4Y8 100 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 BOD1L2Q8IYS8 172 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 ZNF625Q96I27 306 aaPredicted RBP2.03□□□□□ -2.08
SNHG1-220ENST00000544550 SCGB3A1Q96QR1 104 aa2.03□□□□□ -2.08
SNHG1-220ENST00000544550 A8MU10 97 aa2.02□□□□□ -2.09
SNHG1-220ENST00000544550 LINC00587B1AMM8 73 aa2.02□□□□□ -2.09
SNHG1-220ENST00000544550 TCL1BO95988 128 aa2.02□□□□□ -2.09
SNHG1-220ENST00000544550 SPRR1BP22528 89 aa2.02□□□□□ -2.09
SNHG1-220ENST00000544550 DDTP30046 118 aa2.02□□□□□ -2.09
SNHG1-220ENST00000544550 HINT1P49773 126 aaPredicted RBP2.02□□□□□ -2.09
SNHG1-220ENST00000544550 COA6Q5JTJ3 125 aaKnown RBP2.02□□□□□ -2.09
SNHG1-220ENST00000544550 PRO1933Q9H354 126 aa2.02□□□□□ -2.09
SNHG1-220ENST00000544550 CST9LQ9H4G1 147 aa2.02□□□□□ -2.09
SNHG1-220ENST00000544550 A0A0J9YXY3 114 aa2.01□□□□□ -2.09
SNHG1-220ENST00000544550 TRBV10-2A0A0K0K1G8 114 aa2.01□□□□□ -2.09
SNHG1-220ENST00000544550 SMLR1H3BR10 107 aa2.01□□□□□ -2.09
SNHG1-220ENST00000544550 IGLC3P0DOY3 106 aa2.01□□□□□ -2.09
SNHG1-220ENST00000544550 ST20-AS1Q8NBB2 130 aa2.01□□□□□ -2.09
SNHG1-220ENST00000544550 RBM12B-AS1Q9P1G2 102 aa2.01□□□□□ -2.09
SNHG1-220ENST00000544550 CBY1Q9Y3M2 126 aa2.01□□□□□ -2.09
SNHG1-220ENST00000544550 HSBP1O75506 76 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 AKR1D1P51857 326 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 ADIRFQ15847 76 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 MEIG1Q5JSS6 88 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 S100A7L2Q5SY68 101 aa2□□□□□ -2.09
SNHG1-220ENST00000544550 Q6ZVH6 145 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 357.6 ms