RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PRELID3AQ96N28 172 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 TIMM17AQ99595 171 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 SMIM7Q9BQ49 75 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 LIMD2Q9BT23 127 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 KCNQ1DNQ9H478 68 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 LAMTOR2Q9Y2Q5 125 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 A0A0U1RRA0 63 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 A0A1B0GXF2 115 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 K7EMI3 77 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 MT2AP02795 61 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 G0S2P27469 103 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 CEBPGP53567 150 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 KRTAP19-6Q3LI70 58 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 Q8N8P6 123 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 MAP1LC3AQ9H492 121 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 ERG28Q9UKR5 140 aa2.38□□□□□ -2.03
SNHG1-214ENST00000540865 ERC2-IT1O76042 136 aa2.37□□□□□ -2.03
SNHG1-214ENST00000540865 SPINK8P0C7L1 97 aa2.37□□□□□ -2.03
SNHG1-214ENST00000540865 C9orf153Q5TBE3 101 aa2.37□□□□□ -2.03
SNHG1-214ENST00000540865 MRPL54Q6P161 138 aaKnown RBP2.37□□□□□ -2.03
SNHG1-214ENST00000540865 TRAV9-1A0A075B6T8 112 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 H3BRM9 83 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 SFTA2Q6UW10 78 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 ERASQ7Z444 233 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 LINC00518Q8N0U6 118 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 TOMM6Q96B49 74 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 OCR1Q9BZK8 76 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
SNHG1-214ENST00000540865 C20orf202A1L168 122 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 MT1FP04733 61 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 RPL23P62829 140 aaKnown RBP2.35□□□□□ -2.03
SNHG1-214ENST00000540865 S100A12P80511 92 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 KRTAP20-1Q3LI63 56 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 ATP5L2Q7Z4Y8 100 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 SLC51BQ86UW2 128 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 SCGB3A1Q96QR1 104 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 Q9BRP9 147 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 CST9LQ9H4G1 147 aa2.35□□□□□ -2.03
SNHG1-214ENST00000540865 NXT2Q9NPJ8 142 aaKnown RBP2.35□□□□□ -2.03
SNHG1-214ENST00000540865 LINC01549A6NIU2 74 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 SRP19P09132 144 aaKnown RBP2.34□□□□□ -2.03
SNHG1-214ENST00000540865 ADCYAP1P18509 176 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 ADIRFQ15847 76 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 Q5XG85 94 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 ALKAL2Q6UX46 152 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 HRCT1Q6UXD1 115 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 Q6ZRX8 168 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 ZNF625Q96I27 306 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-214ENST00000540865 BATF3Q9NR55 127 aa2.34□□□□□ -2.03
SNHG1-214ENST00000540865 TRBV10-3A0A0K0K1G6 114 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 NCR3O14931 201 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 LINC00158P58513 81 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 CD164Q04900 197 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 PMVKQ15126 192 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 C1orf195Q5TG92 126 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 BOD1L2Q8IYS8 172 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 NAT8Q9UHE5 227 aa2.33□□□□□ -2.04
SNHG1-214ENST00000540865 IGLC3P0DOY3 106 aa2.32□□□□□ -2.04
SNHG1-214ENST00000540865 JOSD1Q15040 202 aaPredicted RBP2.32□□□□□ -2.04
SNHG1-214ENST00000540865 SLC25A34Q6PIV7 304 aa2.32□□□□□ -2.04
SNHG1-214ENST00000540865 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
SNHG1-214ENST00000540865 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
SNHG1-214ENST00000540865 CHTOPQ9Y3Y2 248 aaKnown RBP2.32□□□□□ -2.04
SNHG1-214ENST00000540865 ZNF22P17026 224 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-214ENST00000540865 SPRR1BP22528 89 aa2.31□□□□□ -2.04
SNHG1-214ENST00000540865 RGS21Q2M5E4 152 aa2.31□□□□□ -2.04
SNHG1-214ENST00000540865 C10orf91Q5T1B1 145 aa2.31□□□□□ -2.04
SNHG1-214ENST00000540865 FA2HQ7L5A8 372 aa2.31□□□□□ -2.04
SNHG1-214ENST00000540865 ST20-AS1Q8NBB2 130 aa2.31□□□□□ -2.04
SNHG1-214ENST00000540865 TRBV20-1A0A075B6N2 111 aa2.3□□□□□ -2.04
SNHG1-214ENST00000540865 TRBV10-2A0A0K0K1G8 114 aa2.3□□□□□ -2.04
SNHG1-214ENST00000540865 LINC01546A6NGU7 62 aa2.3□□□□□ -2.04
SNHG1-214ENST00000540865 H7C2G1 150 aa2.3□□□□□ -2.04
SNHG1-214ENST00000540865 SMIM13P0DJ93 91 aa2.3□□□□□ -2.04
SNHG1-214ENST00000540865 DDTP30046 118 aa2.3□□□□□ -2.04
SNHG1-214ENST00000540865 LAMTOR3Q9UHA4 124 aa2.3□□□□□ -2.04
SNHG1-214ENST00000540865 LINC00587B1AMM8 73 aa2.29□□□□□ -2.04
SNHG1-214ENST00000540865 MIR7-3HGQ8N6C7 128 aa2.29□□□□□ -2.04
SNHG1-214ENST00000540865 PRO1933Q9H354 126 aa2.29□□□□□ -2.04
SNHG1-214ENST00000540865 DHRS4-AS1Q9P1J3 65 aa2.29□□□□□ -2.04
SNHG1-214ENST00000540865 LOC107984156A0A0G2JMH3 177 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 C9JQL5 133 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 LGALS3P17931 250 aaKnown RBP2.28□□□□□ -2.04
SNHG1-214ENST00000540865 Q1RN00 199 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 C6orf99Q4VX62 202 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 MEIG1Q5JSS6 88 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 TMEM170BQ5T4T1 132 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 ARL17AQ8IVW1 177 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 TCTE3Q8IZS6 198 aa2.28□□□□□ -2.04
SNHG1-214ENST00000540865 TRAV23DV6A0A075B6W5 121 aa2.27□□□□□ -2.05
SNHG1-214ENST00000540865 C11orf86A6NJI1 115 aa2.27□□□□□ -2.05
SNHG1-214ENST00000540865 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-214ENST00000540865 TCL1BO95988 128 aa2.27□□□□□ -2.05
SNHG1-214ENST00000540865 HINT1P49773 126 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-214ENST00000540865 AKR1D1P51857 326 aa2.27□□□□□ -2.05
SNHG1-214ENST00000540865 NDUFA6P56556 154 aa2.27□□□□□ -2.05
SNHG1-214ENST00000540865 S100A7L2Q5SY68 101 aa2.27□□□□□ -2.05
SNHG1-214ENST00000540865 C20orf166-AS1Q96NR2 134 aa2.27□□□□□ -2.05
SNHG1-214ENST00000540865 MAP1LC3CQ9BXW4 147 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms