RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 TRACP01848 142 aa7.78□□□□□ -1.16
CLIP1-208ENST00000537004 ACYP1P07311 99 aa7.78□□□□□ -1.16
CLIP1-208ENST00000537004 Q6ZRU5 148 aa7.78□□□□□ -1.16
CLIP1-208ENST00000537004 LRCOL1A6NCL2 159 aa7.77□□□□□ -1.17
CLIP1-208ENST00000537004 F8WDY8 70 aa7.77□□□□□ -1.17
CLIP1-208ENST00000537004 H0YGX0 51 aa7.77□□□□□ -1.17
CLIP1-208ENST00000537004 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
CLIP1-208ENST00000537004 XAGE1AQ9HD64 81 aa7.76□□□□□ -1.17
CLIP1-208ENST00000537004 LECT2O14960 151 aa7.76□□□□□ -1.17
CLIP1-208ENST00000537004 RMI2Q96E14 147 aa7.76□□□□□ -1.17
CLIP1-208ENST00000537004 A0A087WYN8 130 aa7.74□□□□□ -1.17
CLIP1-208ENST00000537004 SYCNQ0VAF6 134 aa7.74□□□□□ -1.17
CLIP1-208ENST00000537004 S100A7L2Q5SY68 101 aa7.74□□□□□ -1.17
CLIP1-208ENST00000537004 NDUFC2-KCTD14E9PQ53 114 aa7.74□□□□□ -1.17
CLIP1-208ENST00000537004 CDK2AP2O75956 126 aa7.74□□□□□ -1.17
CLIP1-208ENST00000537004 RPL18AQ02543 176 aaKnown RBP7.74□□□□□ -1.17
CLIP1-208ENST00000537004 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
CLIP1-208ENST00000537004 KRTAP10-1P60331 282 aa7.73□□□□□ -1.17
CLIP1-208ENST00000537004 FAT1Q14517 4588 aa7.73□□□□□ -1.17
CLIP1-208ENST00000537004 DNAL4O96015 105 aa7.72□□□□□ -1.17
CLIP1-208ENST00000537004 BAALC-AS2P0C853 105 aa7.72□□□□□ -1.17
CLIP1-208ENST00000537004 Q8N814 137 aa7.72□□□□□ -1.17
CLIP1-208ENST00000537004 IGLV6-57P01721 117 aa7.71□□□□□ -1.17
CLIP1-208ENST00000537004 FAM236AA0A1B0GUQ0 79 aa7.71□□□□□ -1.18
CLIP1-208ENST00000537004 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
CLIP1-208ENST00000537004 HAMPP81172 84 aa7.71□□□□□ -1.18
CLIP1-208ENST00000537004 Q6ZRP5 223 aa7.71□□□□□ -1.18
CLIP1-208ENST00000537004 LINC00643Q86TS7 51 aa7.71□□□□□ -1.18
CLIP1-208ENST00000537004 C3orf22Q8N5N4 141 aa7.71□□□□□ -1.18
CLIP1-208ENST00000537004 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
CLIP1-208ENST00000537004 UQCRQO14949 82 aa7.7□□□□□ -1.18
CLIP1-208ENST00000537004 VPREB1P12018 145 aa7.7□□□□□ -1.18
CLIP1-208ENST00000537004 C6orf99Q4VX62 202 aa7.7□□□□□ -1.18
CLIP1-208ENST00000537004 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-208ENST00000537004 SLPIP03973 132 aa7.69□□□□□ -1.18
CLIP1-208ENST00000537004 SDIM1Q6ZPB5 146 aa7.69□□□□□ -1.18
CLIP1-208ENST00000537004 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
CLIP1-208ENST00000537004 C9orf153Q5TBE3 101 aa7.69□□□□□ -1.18
CLIP1-208ENST00000537004 C22orf24Q9Y442 160 aa7.68□□□□□ -1.18
CLIP1-208ENST00000537004 C9orf129Q5T035 196 aaKnown RBP7.68□□□□□ -1.18
CLIP1-208ENST00000537004 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
CLIP1-208ENST00000537004 A0A1B0GX51 115 aa7.67□□□□□ -1.18
CLIP1-208ENST00000537004 TLX1NBP0CAT3 122 aa7.67□□□□□ -1.18
CLIP1-208ENST00000537004 TRAV23DV6A0A075B6W5 121 aa7.66□□□□□ -1.18
CLIP1-208ENST00000537004 M0R378 163 aa7.66□□□□□ -1.18
CLIP1-208ENST00000537004 FAM30AQ9NZY2 134 aa7.66□□□□□ -1.18
CLIP1-208ENST00000537004 Q8N1X5 172 aa7.66□□□□□ -1.18
CLIP1-208ENST00000537004 LINC00167Q96N53 147 aa7.65□□□□□ -1.18
CLIP1-208ENST00000537004 ORMDL1Q9P0S3 153 aa7.65□□□□□ -1.18
CLIP1-208ENST00000537004 J3KT08 172 aa7.64□□□□□ -1.19
CLIP1-208ENST00000537004 RPS28P62857 69 aaKnown RBP7.64□□□□□ -1.19
CLIP1-208ENST00000537004 LINC00575Q6W349 94 aa7.64□□□□□ -1.19
CLIP1-208ENST00000537004 SMCR5Q8TEV8 140 aa7.64□□□□□ -1.19
CLIP1-208ENST00000537004 SMR3BP02814 79 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-208ENST00000537004 COX7CP15954 63 aa7.64□□□□□ -1.19
CLIP1-208ENST00000537004 C5orf47Q569G3 176 aa7.64□□□□□ -1.19
CLIP1-208ENST00000537004 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
CLIP1-208ENST00000537004 DNAH8Q96JB1 4490 aa7.63□□□□□ -1.19
CLIP1-208ENST00000537004 ZNF73O43830 326 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-208ENST00000537004 CRYGAP11844 174 aa7.63□□□□□ -1.19
CLIP1-208ENST00000537004 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
CLIP1-208ENST00000537004 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
CLIP1-208ENST00000537004 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
CLIP1-208ENST00000537004 hADV29S1A0JD25 119 aa7.61□□□□□ -1.19
CLIP1-208ENST00000537004 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
CLIP1-208ENST00000537004 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
CLIP1-208ENST00000537004 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
CLIP1-208ENST00000537004 ATOX1O00244 68 aa7.61□□□□□ -1.19
CLIP1-208ENST00000537004 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
CLIP1-208ENST00000537004 TRBV7-6A0A0J9YX20 115 aa7.6□□□□□ -1.19
CLIP1-208ENST00000537004 GAGE2AQ6NT46 116 aa7.6□□□□□ -1.19
CLIP1-208ENST00000537004 OBSCN-AS1Q96MR7 158 aa7.6□□□□□ -1.19
CLIP1-208ENST00000537004 FAM168BA1KXE4 195 aa7.59□□□□□ -1.19
CLIP1-208ENST00000537004 COX7BP24311 80 aa7.59□□□□□ -1.19
CLIP1-208ENST00000537004 C7orf33Q8WU49 177 aa7.59□□□□□ -1.19
CLIP1-208ENST00000537004 TMEM256-PLSCR3K7ERE1 68 aa7.59□□□□□ -1.19
CLIP1-208ENST00000537004 ELOF1P60002 83 aaKnown RBP7.59□□□□□ -1.19
CLIP1-208ENST00000537004 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
CLIP1-208ENST00000537004 CNBPP62633 177 aaKnown RBP7.58□□□□□ -1.2
CLIP1-208ENST00000537004 IGLV5-37A0A075B6J1 123 aa7.57□□□□□ -1.2
CLIP1-208ENST00000537004 EPM2AB3EWF7 344 aa7.57□□□□□ -1.2
CLIP1-208ENST00000537004 C14orf177Q52M58 125 aa7.57□□□□□ -1.2
CLIP1-208ENST00000537004 Q5VSD8 79 aa7.57□□□□□ -1.2
CLIP1-208ENST00000537004 Q6ZSA8 131 aa7.57□□□□□ -1.2
CLIP1-208ENST00000537004 FAM19A5Q7Z5A7 132 aaPredicted RBP7.57□□□□□ -1.2
CLIP1-208ENST00000537004 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
CLIP1-208ENST00000537004 KCNQ1DNQ9H478 68 aa7.57□□□□□ -1.2
CLIP1-208ENST00000537004 Q6ZQY7 126 aa7.56□□□□□ -1.2
CLIP1-208ENST00000537004 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
CLIP1-208ENST00000537004 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-208ENST00000537004 LINC00528Q8N1L1 170 aa7.56□□□□□ -1.2
CLIP1-208ENST00000537004 RPL37AP8A6NKH3 93 aa7.54□□□□□ -1.2
CLIP1-208ENST00000537004 TMEM258P61165 79 aa7.54□□□□□ -1.2
CLIP1-208ENST00000537004 SCXQ7RTU7 201 aa7.54□□□□□ -1.2
CLIP1-208ENST00000537004 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
CLIP1-208ENST00000537004 A0A096LNI7 61 aa7.54□□□□□ -1.2
CLIP1-208ENST00000537004 JMJD7-PLA2G4BH0Y9G9 81 aa7.54□□□□□ -1.2
CLIP1-208ENST00000537004 HERC1Q15751 4861 aa7.53□□□□□ -1.2
CLIP1-208ENST00000537004 Q6JHZ5 121 aa7.53□□□□□ -1.2
CLIP1-208ENST00000537004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms