RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 HIST1H2BKO60814 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BJP06899 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BOP23527 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 G0S2P27469 103 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BBP33778 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BDP58876 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BCP62807 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 JOSD1Q15040 202 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST2H2BEQ16778 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BHQ93079 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BNQ99877 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 HIST1H2BMQ99879 126 aa5.73□□□□□ -1.49
HDAC6-233ENST00000489352 TRBV10-3A0A0K0K1G6 114 aa5.72□□□□□ -1.49
HDAC6-233ENST00000489352 NDUFA6P56556 154 aa5.72□□□□□ -1.49
HDAC6-233ENST00000489352 CD164Q04900 197 aa5.72□□□□□ -1.49
HDAC6-233ENST00000489352 Q6ZRX8 168 aa5.72□□□□□ -1.49
HDAC6-233ENST00000489352 BOD1L2Q8IYS8 172 aa5.72□□□□□ -1.49
HDAC6-233ENST00000489352 PMVKQ15126 192 aa5.71□□□□□ -1.5
HDAC6-233ENST00000489352 Q75L30 129 aa5.71□□□□□ -1.5
HDAC6-233ENST00000489352 Q8N8P6 123 aa5.71□□□□□ -1.5
HDAC6-233ENST00000489352 A0A0U1RRA0 63 aa5.7□□□□□ -1.5
HDAC6-233ENST00000489352 COA6Q5JTJ3 125 aaKnown RBP5.7□□□□□ -1.5
HDAC6-233ENST00000489352 SMIM29Q86T20 159 aa5.7□□□□□ -1.5
HDAC6-233ENST00000489352 BAGE3Q86Y29 109 aa5.7□□□□□ -1.5
HDAC6-233ENST00000489352 LAMTOR3Q9UHA4 124 aa5.7□□□□□ -1.5
HDAC6-233ENST00000489352 LAMTOR2Q9Y2Q5 125 aa5.7□□□□□ -1.5
HDAC6-233ENST00000489352 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
HDAC6-233ENST00000489352 C5orf52A6NGY3 159 aa5.69□□□□□ -1.5
HDAC6-233ENST00000489352 K7EMI3 77 aa5.69□□□□□ -1.5
HDAC6-233ENST00000489352 SNRPEP62304 92 aaKnown RBP5.69□□□□□ -1.5
HDAC6-233ENST00000489352 ANKRD39Q53RE8 183 aa5.69□□□□□ -1.5
HDAC6-233ENST00000489352 Q5XG85 94 aa5.69□□□□□ -1.5
HDAC6-233ENST00000489352 SFTA2Q6UW10 78 aa5.69□□□□□ -1.5
HDAC6-233ENST00000489352 ST20-AS1Q8NBB2 130 aa5.69□□□□□ -1.5
HDAC6-233ENST00000489352 S100A2P29034 98 aa5.68□□□□□ -1.5
HDAC6-233ENST00000489352 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
HDAC6-233ENST00000489352 C18orf32Q8TCD1 76 aa5.68□□□□□ -1.5
HDAC6-233ENST00000489352 SCGB3A1Q96QR1 104 aa5.68□□□□□ -1.5
HDAC6-233ENST00000489352 PRO1933Q9H354 126 aa5.68□□□□□ -1.5
HDAC6-233ENST00000489352 Q6ZVH6 145 aa5.67□□□□□ -1.5
HDAC6-233ENST00000489352 ERASQ7Z444 233 aa5.67□□□□□ -1.5
HDAC6-233ENST00000489352 OBSCN-AS1Q96MR7 158 aa5.67□□□□□ -1.5
HDAC6-233ENST00000489352 KRTAP5-9P26371 169 aa5.66□□□□□ -1.5
HDAC6-233ENST00000489352 FA2HQ7L5A8 372 aa5.66□□□□□ -1.5
HDAC6-233ENST00000489352 CHCHD1Q96BP2 118 aaKnown RBP5.66□□□□□ -1.5
HDAC6-233ENST00000489352 NXT2Q9NPJ8 142 aaKnown RBP5.66□□□□□ -1.5
HDAC6-233ENST00000489352 RBM12B-AS1Q9P1G2 102 aa5.66□□□□□ -1.5
HDAC6-233ENST00000489352 HSBP1O75506 76 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 SERF1AO75920 110 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 LINC00614P0C842 121 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 DDTP30046 118 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 Q1RN00 199 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 HIST3H2BBQ8N257 126 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 TOMM6Q96B49 74 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 KRTAP2-2Q9BYT5 123 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 CST9LQ9H4G1 147 aa5.65□□□□□ -1.5
HDAC6-233ENST00000489352 IGLV5-39A0A0G2JS06 123 aa5.64□□□□□ -1.51
HDAC6-233ENST00000489352 TCL1BO95988 128 aa5.64□□□□□ -1.51
HDAC6-233ENST00000489352 A6NN06 94 aa5.63□□□□□ -1.51
HDAC6-233ENST00000489352 AKR1D1P51857 326 aa5.63□□□□□ -1.51
HDAC6-233ENST00000489352 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
HDAC6-233ENST00000489352 A6NJY4 79 aa5.62□□□□□ -1.51
HDAC6-233ENST00000489352 FABP4P15090 132 aa5.62□□□□□ -1.51
HDAC6-233ENST00000489352 LINC00310P59036 64 aa5.62□□□□□ -1.51
HDAC6-233ENST00000489352 HIST1H2BLQ99880 126 aa5.62□□□□□ -1.51
HDAC6-233ENST00000489352 HINT1P49773 126 aaPredicted RBP5.61□□□□□ -1.51
HDAC6-233ENST00000489352 URB1-AS1Q96HZ7 61 aa5.61□□□□□ -1.51
HDAC6-233ENST00000489352 LOC107984156A0A0G2JMH3 177 aa5.6□□□□□ -1.51
HDAC6-233ENST00000489352 A0A0G2JQZ4 141 aa5.6□□□□□ -1.51
HDAC6-233ENST00000489352 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
HDAC6-233ENST00000489352 SPRR1BP22528 89 aa5.6□□□□□ -1.51
HDAC6-233ENST00000489352 S100A7L2Q5SY68 101 aa5.6□□□□□ -1.51
HDAC6-233ENST00000489352 ARL17AQ8IVW1 177 aa5.6□□□□□ -1.51
HDAC6-233ENST00000489352 Q96NJ1 140 aa5.6□□□□□ -1.51
HDAC6-233ENST00000489352 LINC01549A6NIU2 74 aa5.59□□□□□ -1.51
HDAC6-233ENST00000489352 HBDP02042 147 aa5.59□□□□□ -1.51
HDAC6-233ENST00000489352 SMIM13P0DJ93 91 aa5.59□□□□□ -1.51
HDAC6-233ENST00000489352 MEIG1Q5JSS6 88 aa5.59□□□□□ -1.51
HDAC6-233ENST00000489352 HSPB8Q9UJY1 196 aa5.59□□□□□ -1.51
HDAC6-233ENST00000489352 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
HDAC6-233ENST00000489352 MIR7-3HGQ8N6C7 128 aa5.58□□□□□ -1.52
HDAC6-233ENST00000489352 PMCHL1Q16048 86 aa5.57□□□□□ -1.52
HDAC6-233ENST00000489352 TAL2Q16559 108 aa5.57□□□□□ -1.52
HDAC6-233ENST00000489352 TRAV23DV6A0A075B6W5 121 aa5.56□□□□□ -1.52
HDAC6-233ENST00000489352 A8MWP4 228 aa5.56□□□□□ -1.52
HDAC6-233ENST00000489352 SMIM6P0DI80 62 aa5.56□□□□□ -1.52
HDAC6-233ENST00000489352 ZNF22P17026 224 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-233ENST00000489352 KRTDAPP60985 99 aa5.56□□□□□ -1.52
HDAC6-233ENST00000489352 MAP1LC3CQ9BXW4 147 aa5.56□□□□□ -1.52
HDAC6-233ENST00000489352 TRBV10-2A0A0K0K1G8 114 aa5.55□□□□□ -1.52
HDAC6-233ENST00000489352 ZNF73O43830 326 aaPredicted RBP5.55□□□□□ -1.52
HDAC6-233ENST00000489352 IGLC3P0DOY3 106 aa5.55□□□□□ -1.52
HDAC6-233ENST00000489352 DEFB105AQ8NG35 78 aa5.55□□□□□ -1.52
HDAC6-233ENST00000489352 A0A096LNJ9 63 aa5.54□□□□□ -1.52
HDAC6-233ENST00000489352 SCGB1D1O95968 90 aa5.54□□□□□ -1.52
HDAC6-233ENST00000489352 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
HDAC6-233ENST00000489352 TMEM170BQ5T4T1 132 aa5.54□□□□□ -1.52
HDAC6-233ENST00000489352 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms