RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 LINC00337Q8N6G1 96 aa4.55□□□□□ -1.68
BRCA1-216ENST00000484087 C15orf56Q8N910 161 aa4.55□□□□□ -1.68
BRCA1-216ENST00000484087 C6orf48Q9UBA6 75 aa4.55□□□□□ -1.68
BRCA1-216ENST00000484087 A0A087WTM6 91 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 H0YGX0 51 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 LST1O00453 97 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 SLC25A20O43772 301 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 OCIAD2Q56VL3 154 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 S100A7L2Q5SY68 101 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 TMEM126AQ9H061 195 aa4.54□□□□□ -1.68
BRCA1-216ENST00000484087 FAT1Q14517 4588 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 TRBV10-2A0A0K0K1G8 114 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 NDUFC2-KCTD14E9PQ53 114 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 M0QXV9 152 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 SNCGO76070 127 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 ETDBQ3ZM63 59 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 Q6ZRU5 148 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 MTURNQ8N3F0 131 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 SMIM11BQ8TCY0 68 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 CARD19Q96LW7 228 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 PRO0461Q9UI25 63 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 CBY1Q9Y3M2 126 aa4.53□□□□□ -1.68
BRCA1-216ENST00000484087 USP17L23D6RBM5 183 aa4.52□□□□□ -1.69
BRCA1-216ENST00000484087 H3BT86 120 aa4.52□□□□□ -1.69
BRCA1-216ENST00000484087 PSCAO43653 123 aa4.52□□□□□ -1.69
BRCA1-216ENST00000484087 DNAL4O96015 105 aa4.52□□□□□ -1.69
BRCA1-216ENST00000484087 TRACP01848 142 aa4.52□□□□□ -1.69
BRCA1-216ENST00000484087 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
BRCA1-216ENST00000484087 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
BRCA1-216ENST00000484087 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-216ENST00000484087 LRCOL1A6NCL2 159 aa4.51□□□□□ -1.69
BRCA1-216ENST00000484087 NCR3O14931 201 aa4.51□□□□□ -1.69
BRCA1-216ENST00000484087 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
BRCA1-216ENST00000484087 C14orf177Q52M58 125 aa4.51□□□□□ -1.69
BRCA1-216ENST00000484087 TEN1Q86WV5 123 aa4.51□□□□□ -1.69
BRCA1-216ENST00000484087 DNAH8Q96JB1 4490 aa4.51□□□□□ -1.69
BRCA1-216ENST00000484087 GAGE2EQ4V326 116 aa4.5□□□□□ -1.69
BRCA1-216ENST00000484087 PPDPFLQ8WWR9 84 aa4.5□□□□□ -1.69
BRCA1-216ENST00000484087 XAGE1AQ9HD64 81 aa4.5□□□□□ -1.69
BRCA1-216ENST00000484087 GAGE2DQ9UEU5 116 aa4.5□□□□□ -1.69
BRCA1-216ENST00000484087 A0A1B0GX51 115 aa4.49□□□□□ -1.69
BRCA1-216ENST00000484087 TLX1NBP0CAT3 122 aa4.49□□□□□ -1.69
BRCA1-216ENST00000484087 PRR3P79522 188 aaKnown RBP4.49□□□□□ -1.69
BRCA1-216ENST00000484087 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
BRCA1-216ENST00000484087 M0R378 163 aa4.49□□□□□ -1.69
BRCA1-216ENST00000484087 Q8N814 137 aa4.49□□□□□ -1.69
BRCA1-216ENST00000484087 LINC01600Q96MT4 127 aa4.49□□□□□ -1.69
BRCA1-216ENST00000484087 VPS25Q9BRG1 176 aa4.49□□□□□ -1.69
BRCA1-216ENST00000484087 IGLV5-52A0A0A0MRZ9 124 aa4.48□□□□□ -1.69
BRCA1-216ENST00000484087 Q6ZRP5 223 aa4.48□□□□□ -1.69
BRCA1-216ENST00000484087 NKAPP1Q8N9T2 125 aa4.48□□□□□ -1.69
BRCA1-216ENST00000484087 PKIGQ9Y2B9 76 aa4.48□□□□□ -1.69
BRCA1-216ENST00000484087 TRAV23DV6A0A075B6W5 121 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 LOC107984640A0A0U1RRK4 108 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 IGLV6-57P01721 117 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 SMR3BP02814 79 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-216ENST00000484087 BAALC-AS2P0C853 105 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 VPREB1P12018 145 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 XGP55808 180 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 C6orf99Q4VX62 202 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 DIRC1Q969H9 104 aa4.47□□□□□ -1.69
BRCA1-216ENST00000484087 TRBV10-3A0A0K0K1G6 114 aa4.46□□□□□ -1.7
BRCA1-216ENST00000484087 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
BRCA1-216ENST00000484087 CDK2AP2O75956 126 aa4.46□□□□□ -1.7
BRCA1-216ENST00000484087 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
BRCA1-216ENST00000484087 Q8NDZ9 215 aa4.46□□□□□ -1.7
BRCA1-216ENST00000484087 FAM218AQ96MZ4 157 aa4.46□□□□□ -1.7
BRCA1-216ENST00000484087 ORMDL1Q9P0S3 153 aa4.46□□□□□ -1.7
BRCA1-216ENST00000484087 A0A087WYN8 130 aa4.45□□□□□ -1.7
BRCA1-216ENST00000484087 H3BQ85 93 aa4.45□□□□□ -1.7
BRCA1-216ENST00000484087 CNBPP62633 177 aaKnown RBP4.45□□□□□ -1.7
BRCA1-216ENST00000484087 TRBV7-6A0A0J9YX20 115 aa4.44□□□□□ -1.7
BRCA1-216ENST00000484087 hADV29S1A0JD25 119 aa4.44□□□□□ -1.7
BRCA1-216ENST00000484087 ZNF73O43830 326 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-216ENST00000484087 SLPIP03973 132 aa4.44□□□□□ -1.7
BRCA1-216ENST00000484087 INAFM2P0DMQ5 153 aa4.44□□□□□ -1.7
BRCA1-216ENST00000484087 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
BRCA1-216ENST00000484087 MYCBP2O75592 4640 aa4.44□□□□□ -1.7
BRCA1-216ENST00000484087 TEX49A0A1B0GTD5 131 aa4.43□□□□□ -1.7
BRCA1-216ENST00000484087 TMEM256-PLSCR3K7ERE1 68 aa4.43□□□□□ -1.7
BRCA1-216ENST00000484087 COX7BP24311 80 aa4.43□□□□□ -1.7
BRCA1-216ENST00000484087 LINC00575Q6W349 94 aa4.43□□□□□ -1.7
BRCA1-216ENST00000484087 Q8N1X5 172 aa4.43□□□□□ -1.7
BRCA1-216ENST00000484087 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
BRCA1-216ENST00000484087 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
BRCA1-216ENST00000484087 Q5VSD8 79 aa4.42□□□□□ -1.7
BRCA1-216ENST00000484087 LINC00167Q96N53 147 aa4.42□□□□□ -1.7
BRCA1-216ENST00000484087 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
BRCA1-216ENST00000484087 JMJD7-PLA2G4BH0Y9G9 81 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 PANO1I0J062 215 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 PRYO14603 147 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 ACYP1P07311 99 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 ELOF1P60002 83 aaKnown RBP4.41□□□□□ -1.7
BRCA1-216ENST00000484087 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 MRPL55Q7Z7F7 128 aaKnown RBP4.41□□□□□ -1.7
BRCA1-216ENST00000484087 C7orf33Q8WU49 177 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 KCNQ1DNQ9H478 68 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 LINC00474Q9P2X8 69 aa4.41□□□□□ -1.7
BRCA1-216ENST00000484087 IGKV2-24A0A0C4DH68 120 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms