RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 BATF3Q9NR55 127 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 LAMTOR2Q9Y2Q5 125 aa3.68□□□□□ -1.82
SPTLC1-205ENST00000477888 TRBV10-3A0A0K0K1G6 114 aa3.67□□□□□ -1.82
SPTLC1-205ENST00000477888 Q5XG85 94 aa3.67□□□□□ -1.82
SPTLC1-205ENST00000477888 TOMM6Q96B49 74 aa3.67□□□□□ -1.82
SPTLC1-205ENST00000477888 CST9LQ9H4G1 147 aa3.67□□□□□ -1.82
SPTLC1-205ENST00000477888 ADCYAP1P18509 176 aa3.66□□□□□ -1.82
SPTLC1-205ENST00000477888 Q6ZRX8 168 aa3.66□□□□□ -1.82
SPTLC1-205ENST00000477888 KMT2DO14686 5537 aa3.65□□□□□ -1.82
SPTLC1-205ENST00000477888 H3BRM9 83 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 NCR3O14931 201 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 LGALS3P17931 250 aaKnown RBP3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 G0S2P27469 103 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 LINC00158P58513 81 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 RPL23P62829 140 aaKnown RBP3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 CD164Q04900 197 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 ATP11AUNQ6ZP68 121 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 ST20-AS1Q8NBB2 130 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
SPTLC1-205ENST00000477888 ALKAL2Q6UX46 152 aa3.64□□□□□ -1.83
SPTLC1-205ENST00000477888 BOD1L2Q8IYS8 172 aa3.64□□□□□ -1.83
SPTLC1-205ENST00000477888 H7C2G1 150 aa3.63□□□□□ -1.83
SPTLC1-205ENST00000477888 SRP19P09132 144 aaKnown RBP3.63□□□□□ -1.83
SPTLC1-205ENST00000477888 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
SPTLC1-205ENST00000477888 SPRR1BP22528 89 aa3.63□□□□□ -1.83
SPTLC1-205ENST00000477888 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
SPTLC1-205ENST00000477888 NXT2Q9NPJ8 142 aaKnown RBP3.63□□□□□ -1.83
SPTLC1-205ENST00000477888 IGLC3P0DOY3 106 aa3.62□□□□□ -1.83
SPTLC1-205ENST00000477888 S100A12P80511 92 aa3.62□□□□□ -1.83
SPTLC1-205ENST00000477888 PMVKQ15126 192 aa3.62□□□□□ -1.83
SPTLC1-205ENST00000477888 SFTA2Q6UW10 78 aa3.62□□□□□ -1.83
SPTLC1-205ENST00000477888 ATP5L2Q7Z4Y8 100 aa3.62□□□□□ -1.83
SPTLC1-205ENST00000477888 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
SPTLC1-205ENST00000477888 TRBV20-1A0A075B6N2 111 aa3.61□□□□□ -1.83
SPTLC1-205ENST00000477888 ZNF22P17026 224 aaPredicted RBP3.61□□□□□ -1.83
SPTLC1-205ENST00000477888 ADIRFQ15847 76 aa3.61□□□□□ -1.83
SPTLC1-205ENST00000477888 C10orf91Q5T1B1 145 aa3.61□□□□□ -1.83
SPTLC1-205ENST00000477888 SLC51BQ86UW2 128 aa3.61□□□□□ -1.83
SPTLC1-205ENST00000477888 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
SPTLC1-205ENST00000477888 S100A6P06703 90 aa3.6□□□□□ -1.83
SPTLC1-205ENST00000477888 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
SPTLC1-205ENST00000477888 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
SPTLC1-205ENST00000477888 Q1RN00 199 aa3.6□□□□□ -1.83
SPTLC1-205ENST00000477888 MAP1LC3CQ9BXW4 147 aa3.6□□□□□ -1.83
SPTLC1-205ENST00000477888 SMIM13P0DJ93 91 aa3.59□□□□□ -1.83
SPTLC1-205ENST00000477888 DDTP30046 118 aa3.59□□□□□ -1.83
SPTLC1-205ENST00000477888 SLC25A34Q6PIV7 304 aa3.59□□□□□ -1.83
SPTLC1-205ENST00000477888 HIST1H4GQ99525 98 aa3.59□□□□□ -1.83
SPTLC1-205ENST00000477888 LAMTOR3Q9UHA4 124 aa3.59□□□□□ -1.83
SPTLC1-205ENST00000477888 NAT8Q9UHE5 227 aa3.59□□□□□ -1.83
SPTLC1-205ENST00000477888 V9GYY9 64 aa3.59□□□□□ -1.83
SPTLC1-205ENST00000477888 LINC01549A6NIU2 74 aa3.58□□□□□ -1.84
SPTLC1-205ENST00000477888 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
SPTLC1-205ENST00000477888 PRO1933Q9H354 126 aa3.58□□□□□ -1.84
SPTLC1-205ENST00000477888 TRBV10-2A0A0K0K1G8 114 aa3.57□□□□□ -1.84
SPTLC1-205ENST00000477888 C6orf99Q4VX62 202 aa3.57□□□□□ -1.84
SPTLC1-205ENST00000477888 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
SPTLC1-205ENST00000477888 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
SPTLC1-205ENST00000477888 LOC107984156A0A0G2JMH3 177 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 A0A0G2JQZ4 141 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 LINC01546A6NGU7 62 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 C9JQL5 133 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 AKR1D1P51857 326 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 FA2HQ7L5A8 372 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 ARL17AQ8IVW1 177 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 LITAFQ99732 161 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 DHRS4-AS1Q9P1J3 65 aa3.56□□□□□ -1.84
SPTLC1-205ENST00000477888 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
SPTLC1-205ENST00000477888 ZNF73O43830 326 aaPredicted RBP3.55□□□□□ -1.84
SPTLC1-205ENST00000477888 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
SPTLC1-205ENST00000477888 FAM236DA0A1B0GTK5 79 aa3.54□□□□□ -1.84
SPTLC1-205ENST00000477888 C11orf86A6NJI1 115 aa3.54□□□□□ -1.84
SPTLC1-205ENST00000477888 FAM236CP0DP71 79 aa3.54□□□□□ -1.84
SPTLC1-205ENST00000477888 TCL1BO95988 128 aa3.53□□□□□ -1.84
SPTLC1-205ENST00000477888 NDUFA6P56556 154 aa3.53□□□□□ -1.84
SPTLC1-205ENST00000477888 RGS21Q2M5E4 152 aa3.53□□□□□ -1.84
SPTLC1-205ENST00000477888 MEIG1Q5JSS6 88 aa3.53□□□□□ -1.84
SPTLC1-205ENST00000477888 TMEM170BQ5T4T1 132 aa3.53□□□□□ -1.84
SPTLC1-205ENST00000477888 PCP2Q8IVA1 136 aa3.53□□□□□ -1.84
SPTLC1-205ENST00000477888 LINC00587B1AMM8 73 aa3.52□□□□□ -1.85
SPTLC1-205ENST00000477888 SNAPINO95295 136 aa3.52□□□□□ -1.85
SPTLC1-205ENST00000477888 S100A7L2Q5SY68 101 aa3.52□□□□□ -1.85
SPTLC1-205ENST00000477888 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
SPTLC1-205ENST00000477888 Q8N9P0 234 aaPredicted RBP3.52□□□□□ -1.85
SPTLC1-205ENST00000477888 SPANXB1Q9NS25 103 aaPredicted RBP3.52□□□□□ -1.85
SPTLC1-205ENST00000477888 TMEM223A0PJW6 202 aa3.51□□□□□ -1.85
SPTLC1-205ENST00000477888 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
SPTLC1-205ENST00000477888 C5orf47Q569G3 176 aa3.51□□□□□ -1.85
SPTLC1-205ENST00000477888 TEX49A0A1B0GTD5 131 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 A8MUU9 505 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 NDUFC2O95298 119 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 HRES1P13985 223 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 HINT1P49773 126 aaPredicted RBP3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 CXCL6P80162 114 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 TAL2Q16559 108 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 DEFB105AQ8NG35 78 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 Q96NJ1 140 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
SPTLC1-205ENST00000477888 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms