RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LINC00167Q96N53 147 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 ACYP2P14621 99 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 CD164Q04900 197 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 ABCA12Q86UK0 2595 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 TRBV6-8A0A0A6YYG3 113 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 RPL37AP8A6NKH3 93 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 CFAP46Q8IYW2 2715 aa5.12□□□□□ -1.59
CPSF6-202ENST00000435070 MUC7Q8TAX7 377 aa5.12□□□□□ -1.59
CPSF6-202ENST00000435070 LINC01006Q8NI28 216 aa5.12□□□□□ -1.59
CPSF6-202ENST00000435070 SETXQ7Z333 2677 aaKnown RBP5.12□□□□□ -1.59
CPSF6-202ENST00000435070 ODF3L2Q3SX64 289 aa5.12□□□□□ -1.59
CPSF6-202ENST00000435070 ANKRD17O75179 2603 aaKnown RBP5.11□□□□□ -1.59
CPSF6-202ENST00000435070 MTORP42345 2549 aa5.11□□□□□ -1.59
CPSF6-202ENST00000435070 HIVEP2P31629 2446 aa5.11□□□□□ -1.59
CPSF6-202ENST00000435070 H3BS24 57 aa5.11□□□□□ -1.59
CPSF6-202ENST00000435070 MYO18BQ8IUG5 2567 aa5.11□□□□□ -1.59
CPSF6-202ENST00000435070 BCE1O60756 84 aa5.1□□□□□ -1.59
CPSF6-202ENST00000435070 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
CPSF6-202ENST00000435070 C6orf223Q8N319 242 aa5.1□□□□□ -1.59
CPSF6-202ENST00000435070 DEFB114Q30KQ6 69 aa5.1□□□□□ -1.59
CPSF6-202ENST00000435070 LOC110117498A0A087WWA1 95 aa5.09□□□□□ -1.59
CPSF6-202ENST00000435070 CSNK1G2-AS1Q8NCQ2 148 aa5.09□□□□□ -1.59
CPSF6-202ENST00000435070 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
CPSF6-202ENST00000435070 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
CPSF6-202ENST00000435070 CD164L2Q6UWJ8 174 aa5.09□□□□□ -1.59
CPSF6-202ENST00000435070 TEX15Q9BXT5 2789 aa5.09□□□□□ -1.6
CPSF6-202ENST00000435070 UNQ6190/PRO20217Q6UXQ8 127 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 Q8IZM0 81 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 CRIPTQ9P021 101 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 FLNCQ14315 2725 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 C10orf25Q5T742 122 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 UTP20O75691 2785 aaKnown RBP5.08□□□□□ -1.6
CPSF6-202ENST00000435070 HCG22E2RYF7 251 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 SYCNQ0VAF6 134 aa5.08□□□□□ -1.6
CPSF6-202ENST00000435070 IGLV5-52A0A0A0MRZ9 124 aa5.07□□□□□ -1.6
CPSF6-202ENST00000435070 KPRPQ5T749 579 aaPredicted RBP5.07□□□□□ -1.6
CPSF6-202ENST00000435070 SMR3AQ99954 134 aa5.07□□□□□ -1.6
CPSF6-202ENST00000435070 H0Y9P7 68 aa5.06□□□□□ -1.6
CPSF6-202ENST00000435070 Q9BRP9 147 aa5.06□□□□□ -1.6
CPSF6-202ENST00000435070 Q6ZTC4 211 aa5.06□□□□□ -1.6
CPSF6-202ENST00000435070 ZNF702PQ9H963 129 aa5.06□□□□□ -1.6
CPSF6-202ENST00000435070 A8MU10 97 aa5.06□□□□□ -1.6
CPSF6-202ENST00000435070 KIAA0087Q14695 138 aa5.05□□□□□ -1.6
CPSF6-202ENST00000435070 PLA2G2DQ9UNK4 145 aa5.05□□□□□ -1.6
CPSF6-202ENST00000435070 CYSRT1A8MQ03 144 aa5.04□□□□□ -1.6
CPSF6-202ENST00000435070 OCR1Q9BZK8 76 aa5.04□□□□□ -1.6
CPSF6-202ENST00000435070 ACANP16112 2415 aa5.04□□□□□ -1.6
CPSF6-202ENST00000435070 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
CPSF6-202ENST00000435070 Q6ZRP5 223 aa5.04□□□□□ -1.6
CPSF6-202ENST00000435070 C1orf64Q8NEQ6 169 aa5.04□□□□□ -1.6
CPSF6-202ENST00000435070 LCA10Q71F78 164 aa5.03□□□□□ -1.6
CPSF6-202ENST00000435070 SMIM29Q86T20 159 aa5.03□□□□□ -1.6
CPSF6-202ENST00000435070 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
CPSF6-202ENST00000435070 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
CPSF6-202ENST00000435070 M0R378 163 aa5.02□□□□□ -1.61
CPSF6-202ENST00000435070 GIG44P09565 113 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-202ENST00000435070 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
CPSF6-202ENST00000435070 ERC2-IT1O76042 136 aa5.02□□□□□ -1.61
CPSF6-202ENST00000435070 LINC00612Q8N6U2 182 aa5.02□□□□□ -1.61
CPSF6-202ENST00000435070 A8MUN3 132 aa5.02□□□□□ -1.61
CPSF6-202ENST00000435070 FSHBP01225 129 aa5.02□□□□□ -1.61
CPSF6-202ENST00000435070 COX17Q14061 63 aa5.01□□□□□ -1.61
CPSF6-202ENST00000435070 UNC79Q9P2D8 2635 aa5.01□□□□□ -1.61
CPSF6-202ENST00000435070 LELP1Q5T871 98 aa5.01□□□□□ -1.61
CPSF6-202ENST00000435070 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
CPSF6-202ENST00000435070 C7orf65Q6ZTY9 151 aa5.01□□□□□ -1.61
CPSF6-202ENST00000435070 IGLV6-57P01721 117 aa5□□□□□ -1.61
CPSF6-202ENST00000435070 C1orf137Q5JT78 98 aa5□□□□□ -1.61
CPSF6-202ENST00000435070 PRR15Q8IV56 129 aa5□□□□□ -1.61
CPSF6-202ENST00000435070 LINC01556Q5JQF7 62 aa5□□□□□ -1.61
CPSF6-202ENST00000435070 DOPEY1Q5JWR5 2465 aa5□□□□□ -1.61
CPSF6-202ENST00000435070 ZNF462Q96JM2 2506 aa5□□□□□ -1.61
CPSF6-202ENST00000435070 REG3GQ6UW15 175 aa4.99□□□□□ -1.61
CPSF6-202ENST00000435070 DEFB116Q30KQ4 102 aa4.99□□□□□ -1.61
CPSF6-202ENST00000435070 NBPF19A0A087WUL8 3843 aa4.99□□□□□ -1.61
CPSF6-202ENST00000435070 C1orf134Q5TEV5 83 aa4.98□□□□□ -1.61
CPSF6-202ENST00000435070 AKAP9Q99996 3911 aa4.98□□□□□ -1.61
CPSF6-202ENST00000435070 A0A1B0GUV1 79 aa4.98□□□□□ -1.61
CPSF6-202ENST00000435070 Q6ZRU5 148 aa4.98□□□□□ -1.61
CPSF6-202ENST00000435070 IGKV2D-30A0A075B6S6 120 aa4.97□□□□□ -1.61
CPSF6-202ENST00000435070 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
CPSF6-202ENST00000435070 ST20-AS1Q8NBB2 130 aa4.97□□□□□ -1.61
CPSF6-202ENST00000435070 Q1T7F1 81 aa4.96□□□□□ -1.62
CPSF6-202ENST00000435070 C6orf48Q9UBA6 75 aa4.96□□□□□ -1.62
CPSF6-202ENST00000435070 ELOF1P60002 83 aaKnown RBP4.95□□□□□ -1.62
CPSF6-202ENST00000435070 APLNQ9ULZ1 77 aa4.95□□□□□ -1.62
CPSF6-202ENST00000435070 C8orf17Q9NRJ1 99 aa4.94□□□□□ -1.62
CPSF6-202ENST00000435070 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
CPSF6-202ENST00000435070 A0A1W2PNN7 141 aa4.93□□□□□ -1.62
CPSF6-202ENST00000435070 K7EQZ3 153 aa4.92□□□□□ -1.62
CPSF6-202ENST00000435070 KRTAP10-9P60411 292 aa4.92□□□□□ -1.62
CPSF6-202ENST00000435070 UQCR11O14957 56 aa4.92□□□□□ -1.62
CPSF6-202ENST00000435070 LINC00528Q8N1L1 170 aa4.92□□□□□ -1.62
CPSF6-202ENST00000435070 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
CPSF6-202ENST00000435070 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
CPSF6-202ENST00000435070 FLNAP21333 2647 aaKnown RBP4.91□□□□□ -1.62
CPSF6-202ENST00000435070 BAHCC1Q9P281 2608 aa4.91□□□□□ -1.62
CPSF6-202ENST00000435070 RBM12B-AS1Q9P1G2 102 aa4.91□□□□□ -1.62
CPSF6-202ENST00000435070 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms