RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 LECT2O14960 151 aa2.45□□□□□ -2.02
HMGB3P20-201ENST00000417997 RPL18AQ02543 176 aaKnown RBP2.45□□□□□ -2.02
HMGB3P20-201ENST00000417997 C9orf116Q5BN46 136 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P20-201ENST00000417997 TRBV20-1A0A075B6N2 111 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 NDUFC2-KCTD14E9PQ53 114 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 M0R2N4 97 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 NDUFC2O95298 119 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 LY6G6CO95867 125 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 ATXN8Q156A1 80 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 S100A7L2Q5SY68 101 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 CASC10Q5T4H9 136 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 XAGE1AQ9HD64 81 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 PKIGQ9Y2B9 76 aa2.44□□□□□ -2.02
HMGB3P20-201ENST00000417997 COL6A5A8TX70 2615 aa2.43□□□□□ -2.02
HMGB3P20-201ENST00000417997 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P20-201ENST00000417997 LOC107984640A0A0U1RRK4 108 aa2.43□□□□□ -2.02
HMGB3P20-201ENST00000417997 Q6ZVQ6 151 aa2.43□□□□□ -2.02
HMGB3P20-201ENST00000417997 LINC00337Q8N6G1 96 aa2.43□□□□□ -2.02
HMGB3P20-201ENST00000417997 NKAPP1Q8N9T2 125 aa2.43□□□□□ -2.02
HMGB3P20-201ENST00000417997 IGKV2-28A0A075B6P5 120 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 C9JAW5 83 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 H3BMG7 143 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 C3orf84H3BNL1 204 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 SNCGO76070 127 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 TCL1BO95988 128 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 DNAL4O96015 105 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 IGKV2D-28P01615 120 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 TLX1NBP0CAT3 122 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 MTURNQ8N3F0 131 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 SMIM11BQ8TCY0 68 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 TMEM126AQ9H061 195 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 ANAPC11Q9NYG5 84 aa2.42□□□□□ -2.02
HMGB3P20-201ENST00000417997 TENM3Q9P273 2699 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 TRAV23DV6A0A075B6W5 121 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 TRBV10-2A0A0K0K1G8 114 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 FAM168BA1KXE4 195 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 H0YGX0 51 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 RPL28P46779 137 aaKnown RBP2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 CNBPP62633 177 aaKnown RBP2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 WFDC2Q14508 124 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 LINC01620Q4KN68 170 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 C1orf134Q5TEV5 83 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 FAM19A5Q7Z5A7 132 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 CLEC2BQ92478 149 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 DIRC1Q969H9 104 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 NBEAL2Q6ZNJ1 2754 aa2.41□□□□□ -2.02
HMGB3P20-201ENST00000417997 PKD1L1Q8TDX9 2849 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 IGKV2-24A0A0C4DH68 120 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 TRBV10-3A0A0K0K1G6 114 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 F8W1H4 67 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 M0R378 163 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 LST1O00453 97 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 SLC25A20O43772 301 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 PRR3P79522 188 aaKnown RBP2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 C6orf99Q4VX62 202 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 Q6ZRN7 208 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 Q8N814 137 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 TRRAPQ9Y4A5 3859 aa2.4□□□□□ -2.03
HMGB3P20-201ENST00000417997 ANK2Q01484 3957 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 A0A087WTM6 91 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 A0A096LNI7 61 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 LRCOL1A6NCL2 159 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 C16orf90A8MZG2 172 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 H3BT86 120 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 J3QR89 54 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 M0QXV9 152 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 TRACP01848 142 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 SCGB1A1P11684 91 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 COX7BP24311 80 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 C9orf129Q5T035 196 aaKnown RBP2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 ANKRD29Q8N6D5 301 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 Q8NDZ9 215 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 DHRS4-AS1Q9P1J3 65 aa2.39□□□□□ -2.03
HMGB3P20-201ENST00000417997 DNAH3Q8TD57 4116 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 NOTCH1P46531 2555 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 ETDCA0A1B0GVM5 59 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 A0A1B0GX51 115 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 H0Y9J4 135 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 K7ERU9 68 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 ZNF73O43830 326 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 IGLV6-57P01721 117 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 UBE2BP63146 152 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 ETDBQ3ZM63 59 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 MRPL55Q7Z7F7 128 aaKnown RBP2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 TEN1Q86WV5 123 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 C9orf163Q8N9P6 203 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 C7orf33Q8WU49 177 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 DPH3Q96FX2 82 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 ORMDL1Q9P0S3 153 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 LINC00474Q9P2X8 69 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 CMYA5Q8N3K9 4069 aa2.38□□□□□ -2.03
HMGB3P20-201ENST00000417997 A0A1B0GV72 72 aa2.37□□□□□ -2.03
HMGB3P20-201ENST00000417997 hADV29S1A0JD25 119 aa2.37□□□□□ -2.03
HMGB3P20-201ENST00000417997 CHTF8P0CG12 524 aa2.37□□□□□ -2.03
HMGB3P20-201ENST00000417997 ELOF1P60002 83 aaKnown RBP2.37□□□□□ -2.03
HMGB3P20-201ENST00000417997 PPDPFLQ8WWR9 84 aa2.37□□□□□ -2.03
HMGB3P20-201ENST00000417997 C22orf24Q9Y442 160 aa2.37□□□□□ -2.03
HMGB3P20-201ENST00000417997 MGAM2Q2M2H8 2515 aa2.37□□□□□ -2.03
HMGB3P20-201ENST00000417997 TRBV7-6A0A0J9YX20 115 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms