RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 C10orf99Q6UWK7 81 aa4.07□□□□□ -1.76
SCN2A-202ENST00000375427 IGFL2Q6UWQ7 119 aa4.07□□□□□ -1.76
SCN2A-202ENST00000375427 PSMG3-AS1Q96PY0 264 aa4.07□□□□□ -1.76
SCN2A-202ENST00000375427 COL27A1Q8IZC6 1860 aaPredicted RBP4.06□□□□□ -1.76
SCN2A-202ENST00000375427 ANKRD11Q6UB99 2663 aaPredicted RBP4.06□□□□□ -1.76
SCN2A-202ENST00000375427 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
SCN2A-202ENST00000375427 J3QKU1 62 aa4.06□□□□□ -1.76
SCN2A-202ENST00000375427 IGLV1-47P01700 117 aa4.05□□□□□ -1.76
SCN2A-202ENST00000375427 C9orf163Q8N9P6 203 aa4.05□□□□□ -1.76
SCN2A-202ENST00000375427 PRRC2CQ9Y520 2896 aaKnown RBP4.04□□□□□ -1.76
SCN2A-202ENST00000375427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.03□□□□□ -1.76
SCN2A-202ENST00000375427 ODF3L2Q3SX64 289 aa4.03□□□□□ -1.76
SCN2A-202ENST00000375427 IGFL3Q6UXB1 125 aa4.03□□□□□ -1.76
SCN2A-202ENST00000375427 C1orf229Q6ZS94 237 aaPredicted RBP4.03□□□□□ -1.76
SCN2A-202ENST00000375427 A0A1W2PNN7 141 aa4.03□□□□□ -1.76
SCN2A-202ENST00000375427 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
SCN2A-202ENST00000375427 SMCPP49901 116 aaPredicted RBP4.03□□□□□ -1.76
SCN2A-202ENST00000375427 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
SCN2A-202ENST00000375427 BRWD1-AS2P59051 145 aa4.02□□□□□ -1.77
SCN2A-202ENST00000375427 FAM229BQ4G0N7 80 aa4.02□□□□□ -1.77
SCN2A-202ENST00000375427 J3QL48 77 aa4.01□□□□□ -1.77
SCN2A-202ENST00000375427 Q6ZR54 194 aa4.01□□□□□ -1.77
SCN2A-202ENST00000375427 GCN1Q92616 2671 aaKnown RBP4□□□□□ -1.77
SCN2A-202ENST00000375427 DSCR10P59022 87 aa4□□□□□ -1.77
SCN2A-202ENST00000375427 Q8N1X5 172 aa4□□□□□ -1.77
SCN2A-202ENST00000375427 FAM218AQ96MZ4 157 aa4□□□□□ -1.77
SCN2A-202ENST00000375427 ZNF295-AS1Q8N0V1 137 aa4□□□□□ -1.77
SCN2A-202ENST00000375427 A0A1W2PNM2 257 aa4□□□□□ -1.77
SCN2A-202ENST00000375427 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
SCN2A-202ENST00000375427 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
SCN2A-202ENST00000375427 LTBP1Q14766 1721 aa3.99□□□□□ -1.77
SCN2A-202ENST00000375427 PHF5AQ7RTV0 110 aaKnown RBP3.99□□□□□ -1.77
SCN2A-202ENST00000375427 ZNF580Q9UK33 172 aa3.99□□□□□ -1.77
SCN2A-202ENST00000375427 LINC00304Q8N9R0 145 aa3.98□□□□□ -1.77
SCN2A-202ENST00000375427 FLVCR1-AS1Q8TAF5 88 aa3.98□□□□□ -1.77
SCN2A-202ENST00000375427 CFAP46Q8IYW2 2715 aa3.98□□□□□ -1.77
SCN2A-202ENST00000375427 IGLV1-51P01701 117 aa3.98□□□□□ -1.77
SCN2A-202ENST00000375427 Q8NA96 180 aa3.98□□□□□ -1.77
SCN2A-202ENST00000375427 GAS8-AS1O95177 125 aa3.98□□□□□ -1.77
SCN2A-202ENST00000375427 R4GN34 69 aa3.98□□□□□ -1.77
SCN2A-202ENST00000375427 COL11A2P13942 1736 aaPredicted RBP3.97□□□□□ -1.77
SCN2A-202ENST00000375427 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
SCN2A-202ENST00000375427 C15orf56Q8N910 161 aa3.97□□□□□ -1.77
SCN2A-202ENST00000375427 DNAH10OSP0CZ25 163 aa3.97□□□□□ -1.77
SCN2A-202ENST00000375427 UNC79Q9P2D8 2635 aa3.97□□□□□ -1.77
SCN2A-202ENST00000375427 LINC00315P59091 139 aa3.96□□□□□ -1.77
SCN2A-202ENST00000375427 CEP295Q9C0D2 2601 aa3.96□□□□□ -1.77
SCN2A-202ENST00000375427 MAST4O15021 2626 aa3.96□□□□□ -1.78
SCN2A-202ENST00000375427 LINC00574Q9H8X3 128 aa3.96□□□□□ -1.78
SCN2A-202ENST00000375427 C19orf73Q9NVV2 129 aa3.95□□□□□ -1.78
SCN2A-202ENST00000375427 M0R2T5 61 aa3.95□□□□□ -1.78
SCN2A-202ENST00000375427 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
SCN2A-202ENST00000375427 TEP1Q99973 2627 aaKnown RBP3.94□□□□□ -1.78
SCN2A-202ENST00000375427 C11orf21Q9P2W6 132 aa3.94□□□□□ -1.78
SCN2A-202ENST00000375427 IGSF10Q6WRI0 2623 aa3.94□□□□□ -1.78
SCN2A-202ENST00000375427 LINC00310P59036 64 aa3.94□□□□□ -1.78
SCN2A-202ENST00000375427 PRR34Q9NV39 138 aa3.94□□□□□ -1.78
SCN2A-202ENST00000375427 LINC01546A6NGU7 62 aa3.93□□□□□ -1.78
SCN2A-202ENST00000375427 Q5VV11 94 aa3.93□□□□□ -1.78
SCN2A-202ENST00000375427 IGFL1Q6UW32 110 aa3.93□□□□□ -1.78
SCN2A-202ENST00000375427 S4R3F8 94 aa3.92□□□□□ -1.78
SCN2A-202ENST00000375427 KCNQ1DNQ9H478 68 aa3.92□□□□□ -1.78
SCN2A-202ENST00000375427 URB1-AS1Q96HZ7 61 aa3.92□□□□□ -1.78
SCN2A-202ENST00000375427 Q5XG85 94 aa3.91□□□□□ -1.78
SCN2A-202ENST00000375427 Q6ZSA8 131 aa3.9□□□□□ -1.78
SCN2A-202ENST00000375427 COL6A5A8TX70 2615 aa3.9□□□□□ -1.78
SCN2A-202ENST00000375427 GVQW2A0A096LPI5 108 aaPredicted RBP3.9□□□□□ -1.79
SCN2A-202ENST00000375427 IGLV1-40P01703 118 aa3.89□□□□□ -1.79
SCN2A-202ENST00000375427 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
SCN2A-202ENST00000375427 A0A096LNJ9 63 aa3.89□□□□□ -1.79
SCN2A-202ENST00000375427 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
SCN2A-202ENST00000375427 P0C880 135 aa3.87□□□□□ -1.79
SCN2A-202ENST00000375427 FHL3Q13643 280 aa3.87□□□□□ -1.79
SCN2A-202ENST00000375427 LTBP2Q14767 1821 aa3.87□□□□□ -1.79
SCN2A-202ENST00000375427 ZNF861PO60384 105 aa3.86□□□□□ -1.79
SCN2A-202ENST00000375427 H3BNG1 76 aa3.86□□□□□ -1.79
SCN2A-202ENST00000375427 BRI3O95415 125 aa3.86□□□□□ -1.79
SCN2A-202ENST00000375427 KLK9Q2XQG4 91 aa3.86□□□□□ -1.79
SCN2A-202ENST00000375427 LITAFQ99732 161 aa3.85□□□□□ -1.79
SCN2A-202ENST00000375427 LMO4P61968 165 aa3.85□□□□□ -1.79
SCN2A-202ENST00000375427 Q6ZSN1 163 aa3.85□□□□□ -1.79
SCN2A-202ENST00000375427 Q8NDZ9 215 aa3.83□□□□□ -1.8
SCN2A-202ENST00000375427 Q8N377 158 aa3.83□□□□□ -1.8
SCN2A-202ENST00000375427 COL4A6Q14031 1691 aa3.82□□□□□ -1.8
SCN2A-202ENST00000375427 M0QZ58 72 aa3.82□□□□□ -1.8
SCN2A-202ENST00000375427 C16orf95Q9H693 158 aa3.81□□□□□ -1.8
SCN2A-202ENST00000375427 ITPR2Q14571 2701 aa3.81□□□□□ -1.8
SCN2A-202ENST00000375427 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
SCN2A-202ENST00000375427 ITPR3Q14573 2671 aa3.8□□□□□ -1.8
SCN2A-202ENST00000375427 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
SCN2A-202ENST00000375427 NBDYA0A0U1RRE5 68 aa3.79□□□□□ -1.8
SCN2A-202ENST00000375427 FLNBO75369 2602 aaKnown RBP3.78□□□□□ -1.8
SCN2A-202ENST00000375427 A0A1W2PNU3 283 aaPredicted RBP3.78□□□□□ -1.8
SCN2A-202ENST00000375427 MUC22E2RYF6 1773 aaPredicted RBP3.77□□□□□ -1.81
SCN2A-202ENST00000375427 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
SCN2A-202ENST00000375427 THSD7BQ9C0I4 1608 aa3.76□□□□□ -1.81
SCN2A-202ENST00000375427 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
SCN2A-202ENST00000375427 SPRR4Q96PI1 79 aa3.74□□□□□ -1.81
SCN2A-202ENST00000375427 UTP20O75691 2785 aaKnown RBP3.74□□□□□ -1.81
SCN2A-202ENST00000375427 A0A0G2JQZ4 141 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms