RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 NOTCH4Q99466 2003 aa4.28□□□□□ -1.72
UBR4-204ENST00000375254 SBF1O95248 1867 aa4.28□□□□□ -1.72
UBR4-204ENST00000375254 TMEM131Q92545 1883 aa4.28□□□□□ -1.72
UBR4-204ENST00000375254 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
UBR4-204ENST00000375254 ANK1P16157 1881 aa4.27□□□□□ -1.73
UBR4-204ENST00000375254 ALPK3Q96L96 1907 aa4.27□□□□□ -1.73
UBR4-204ENST00000375254 ZNF831Q5JPB2 1677 aa4.27□□□□□ -1.73
UBR4-204ENST00000375254 SPACA4Q8TDM5 124 aa4.26□□□□□ -1.73
UBR4-204ENST00000375254 PLXNA2O75051 1894 aa4.26□□□□□ -1.73
UBR4-204ENST00000375254 HRES1P13985 223 aa4.26□□□□□ -1.73
UBR4-204ENST00000375254 ANAPC1Q9H1A4 1944 aa4.26□□□□□ -1.73
UBR4-204ENST00000375254 TYMSOSQ8TAI1 123 aa4.25□□□□□ -1.73
UBR4-204ENST00000375254 ZCCHC13Q8WW36 166 aaKnown RBP4.25□□□□□ -1.73
UBR4-204ENST00000375254 XIRP1Q702N8 1843 aaKnown RBP4.25□□□□□ -1.73
UBR4-204ENST00000375254 RGPD3A6NKT7 1758 aaPredicted RBP4.25□□□□□ -1.73
UBR4-204ENST00000375254 RGPD4Q7Z3J3 1758 aa4.25□□□□□ -1.73
UBR4-204ENST00000375254 C19orf73Q9NVV2 129 aa4.25□□□□□ -1.73
UBR4-204ENST00000375254 FRMPD3Q5JV73 1810 aa4.25□□□□□ -1.73
UBR4-204ENST00000375254 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
UBR4-204ENST00000375254 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
UBR4-204ENST00000375254 EPG5Q9HCE0 2579 aa4.24□□□□□ -1.73
UBR4-204ENST00000375254 ZNF575Q86XF7 245 aa4.24□□□□□ -1.73
UBR4-204ENST00000375254 A0A096LNT2 108 aa4.24□□□□□ -1.73
UBR4-204ENST00000375254 NUP210LQ5VU65 1888 aa4.23□□□□□ -1.73
UBR4-204ENST00000375254 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
UBR4-204ENST00000375254 LINC00612Q8N6U2 182 aa4.22□□□□□ -1.73
UBR4-204ENST00000375254 LCE6AA0A183 80 aa4.22□□□□□ -1.73
UBR4-204ENST00000375254 KIAA1671Q9BY89 1806 aa4.21□□□□□ -1.73
UBR4-204ENST00000375254 Q6ZR54 194 aa4.21□□□□□ -1.74
UBR4-204ENST00000375254 SPTBN4Q9H254 2564 aa4.21□□□□□ -1.74
UBR4-204ENST00000375254 M0R2N4 97 aa4.2□□□□□ -1.74
UBR4-204ENST00000375254 ZSWIM8A7E2V4 1837 aa4.2□□□□□ -1.74
UBR4-204ENST00000375254 A0A0D9SG42 100 aa4.2□□□□□ -1.74
UBR4-204ENST00000375254 ADAMTS20P59510 1910 aa4.2□□□□□ -1.74
UBR4-204ENST00000375254 ITGB4P16144 1822 aa4.2□□□□□ -1.74
UBR4-204ENST00000375254 HELZP42694 1942 aaKnown RBP4.19□□□□□ -1.74
UBR4-204ENST00000375254 FAM168BA1KXE4 195 aa4.18□□□□□ -1.74
UBR4-204ENST00000375254 WDR90Q96KV7 1748 aa4.18□□□□□ -1.74
UBR4-204ENST00000375254 SPRR1AP35321 89 aa4.18□□□□□ -1.74
UBR4-204ENST00000375254 SPRR1BP22528 89 aa4.17□□□□□ -1.74
UBR4-204ENST00000375254 RTL8CO15255 209 aa4.16□□□□□ -1.74
UBR4-204ENST00000375254 TNS1Q9HBL0 1735 aaKnown RBP4.16□□□□□ -1.74
UBR4-204ENST00000375254 COL4A6Q14031 1691 aa4.15□□□□□ -1.75
UBR4-204ENST00000375254 PLXNB3Q9ULL4 1909 aa4.15□□□□□ -1.75
UBR4-204ENST00000375254 GIG44P09565 113 aaPredicted RBP4.15□□□□□ -1.75
UBR4-204ENST00000375254 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
UBR4-204ENST00000375254 FNDC1Q4ZHG4 1894 aaPredicted RBP4.14□□□□□ -1.75
UBR4-204ENST00000375254 PIEZO2Q9H5I5 2752 aa4.14□□□□□ -1.75
UBR4-204ENST00000375254 ARID2Q68CP9 1835 aa4.14□□□□□ -1.75
UBR4-204ENST00000375254 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
UBR4-204ENST00000375254 ANKRD17O75179 2603 aaKnown RBP4.13□□□□□ -1.75
UBR4-204ENST00000375254 NBDYA0A0U1RRE5 68 aa4.13□□□□□ -1.75
UBR4-204ENST00000375254 Q8N1X5 172 aa4.13□□□□□ -1.75
UBR4-204ENST00000375254 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
UBR4-204ENST00000375254 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
UBR4-204ENST00000375254 SIP14410 1827 aa4.13□□□□□ -1.75
UBR4-204ENST00000375254 LINC00304Q8N9R0 145 aa4.12□□□□□ -1.75
UBR4-204ENST00000375254 CR1P17927 2039 aa4.11□□□□□ -1.75
UBR4-204ENST00000375254 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
UBR4-204ENST00000375254 THSD7BQ9C0I4 1608 aa4.1□□□□□ -1.75
UBR4-204ENST00000375254 PANO1I0J062 215 aa4.1□□□□□ -1.75
UBR4-204ENST00000375254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.1□□□□□ -1.75
UBR4-204ENST00000375254 COL5A1P20908 1838 aaPredicted RBP4.09□□□□□ -1.75
UBR4-204ENST00000375254 NUP210Q8TEM1 1887 aaPredicted RBP4.09□□□□□ -1.75
UBR4-204ENST00000375254 CHD8Q9HCK8 2581 aa4.09□□□□□ -1.76
UBR4-204ENST00000375254 FASNP49327 2511 aaKnown RBP4.08□□□□□ -1.76
UBR4-204ENST00000375254 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
UBR4-204ENST00000375254 Q5W150 140 aa4.08□□□□□ -1.76
UBR4-204ENST00000375254 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
UBR4-204ENST00000375254 M0QZ58 72 aa4.06□□□□□ -1.76
UBR4-204ENST00000375254 CEP192Q8TEP8 1941 aa4.05□□□□□ -1.76
UBR4-204ENST00000375254 A0A0G2JQZ4 141 aa4.05□□□□□ -1.76
UBR4-204ENST00000375254 KRTAP11-1Q8IUC1 163 aa4.05□□□□□ -1.76
UBR4-204ENST00000375254 IGF2RP11717 2491 aa4.05□□□□□ -1.76
UBR4-204ENST00000375254 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.76
UBR4-204ENST00000375254 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
UBR4-204ENST00000375254 CEP350Q5VT06 3117 aa4.02□□□□□ -1.77
UBR4-204ENST00000375254 USP24Q9UPU5 2620 aa4.02□□□□□ -1.77
UBR4-204ENST00000375254 PSORS1C2Q9UIG4 136 aa4.02□□□□□ -1.77
UBR4-204ENST00000375254 BPTFQ12830 3046 aa4.01□□□□□ -1.77
UBR4-204ENST00000375254 A0A1W2PPR1 153 aa4.01□□□□□ -1.77
UBR4-204ENST00000375254 MGAMO43451 1857 aa4.01□□□□□ -1.77
UBR4-204ENST00000375254 KRTAP26-1Q6PEX3 210 aa4□□□□□ -1.77
UBR4-204ENST00000375254 STAB1Q9NY15 2570 aa4□□□□□ -1.77
UBR4-204ENST00000375254 A8MUU9 505 aa3.99□□□□□ -1.77
UBR4-204ENST00000375254 STAB2Q8WWQ8 2551 aa3.99□□□□□ -1.77
UBR4-204ENST00000375254 PTPRSQ13332 1948 aa3.99□□□□□ -1.77
UBR4-204ENST00000375254 A0A087WTM6 91 aa3.98□□□□□ -1.77
UBR4-204ENST00000375254 S4R3F8 94 aa3.98□□□□□ -1.77
UBR4-204ENST00000375254 CENPFP49454 3210 aa3.98□□□□□ -1.77
UBR4-204ENST00000375254 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
UBR4-204ENST00000375254 WDR87Q6ZQQ6 2873 aa3.97□□□□□ -1.77
UBR4-204ENST00000375254 AKAP13Q12802 2813 aa3.97□□□□□ -1.77
UBR4-204ENST00000375254 GOLGB1Q14789 3259 aaKnown RBP3.96□□□□□ -1.77
UBR4-204ENST00000375254 KIF26AQ9ULI4 1882 aaPredicted RBP3.96□□□□□ -1.78
UBR4-204ENST00000375254 MGAM2Q2M2H8 2515 aa3.96□□□□□ -1.78
UBR4-204ENST00000375254 R4GN34 69 aa3.95□□□□□ -1.78
UBR4-204ENST00000375254 LRP4O75096 1905 aa3.94□□□□□ -1.78
UBR4-204ENST00000375254 A0A0C4DFX4 3053 aa3.94□□□□□ -1.78
UBR4-204ENST00000375254 CPAMD8Q8IZJ3 1885 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms