RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SMIM29Q86T20 159 aa4.55□□□□□ -1.68
VPS13B-202ENST00000357162 LINC00167Q96N53 147 aa4.55□□□□□ -1.68
VPS13B-202ENST00000357162 FSHBP01225 129 aa4.55□□□□□ -1.68
VPS13B-202ENST00000357162 NANOS2P60321 138 aaKnown RBP4.55□□□□□ -1.68
VPS13B-202ENST00000357162 DEFB4AO15263 64 aa4.55□□□□□ -1.68
VPS13B-202ENST00000357162 LAMA2P24043 3122 aaKnown RBP4.55□□□□□ -1.68
VPS13B-202ENST00000357162 FAM218AQ96MZ4 157 aa4.54□□□□□ -1.68
VPS13B-202ENST00000357162 SRCAPQ6ZRS2 3230 aa4.54□□□□□ -1.68
VPS13B-202ENST00000357162 ASB16-AS1Q495Z4 193 aa4.54□□□□□ -1.68
VPS13B-202ENST00000357162 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
VPS13B-202ENST00000357162 LYPD5Q6UWN5 251 aa4.53□□□□□ -1.68
VPS13B-202ENST00000357162 MDFIQ99750 246 aa4.53□□□□□ -1.68
VPS13B-202ENST00000357162 C9orf116Q5BN46 136 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-202ENST00000357162 TGP01266 2768 aa4.52□□□□□ -1.69
VPS13B-202ENST00000357162 PLA2G2DQ9UNK4 145 aa4.51□□□□□ -1.69
VPS13B-202ENST00000357162 LCA10Q71F78 164 aa4.51□□□□□ -1.69
VPS13B-202ENST00000357162 PRO3102Q9H379 93 aa4.51□□□□□ -1.69
VPS13B-202ENST00000357162 C16orf90A8MZG2 172 aa4.51□□□□□ -1.69
VPS13B-202ENST00000357162 LINC00528Q8N1L1 170 aa4.51□□□□□ -1.69
VPS13B-202ENST00000357162 DMXL2Q8TDJ6 3036 aa4.51□□□□□ -1.69
VPS13B-202ENST00000357162 DNAH10OSP0CZ25 163 aa4.5□□□□□ -1.69
VPS13B-202ENST00000357162 AVPP01185 164 aa4.5□□□□□ -1.69
VPS13B-202ENST00000357162 SPINK6Q6UWN8 80 aa4.5□□□□□ -1.69
VPS13B-202ENST00000357162 LINC00336Q6ZUF6 198 aa4.5□□□□□ -1.69
VPS13B-202ENST00000357162 SMCR5Q8TEV8 140 aa4.5□□□□□ -1.69
VPS13B-202ENST00000357162 PRR34Q9NV39 138 aa4.5□□□□□ -1.69
VPS13B-202ENST00000357162 VWFP04275 2813 aa4.49□□□□□ -1.69
VPS13B-202ENST00000357162 A8MUN3 132 aa4.49□□□□□ -1.69
VPS13B-202ENST00000357162 GOLGB1Q14789 3259 aaKnown RBP4.49□□□□□ -1.69
VPS13B-202ENST00000357162 MXRA5Q9NR99 2828 aa4.49□□□□□ -1.69
VPS13B-202ENST00000357162 Q6ZSN1 163 aa4.49□□□□□ -1.69
VPS13B-202ENST00000357162 KIAA0087Q14695 138 aa4.49□□□□□ -1.69
VPS13B-202ENST00000357162 PCOTHQ58A44 107 aa4.49□□□□□ -1.69
VPS13B-202ENST00000357162 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
VPS13B-202ENST00000357162 TLX1NBP0CAT3 122 aa4.48□□□□□ -1.69
VPS13B-202ENST00000357162 COA5Q86WW8 74 aa4.48□□□□□ -1.69
VPS13B-202ENST00000357162 C22orf24Q9Y442 160 aa4.47□□□□□ -1.69
VPS13B-202ENST00000357162 A0A096LNI7 61 aa4.47□□□□□ -1.69
VPS13B-202ENST00000357162 PRR3P79522 188 aaKnown RBP4.47□□□□□ -1.69
VPS13B-202ENST00000357162 Q6ZRU5 148 aa4.47□□□□□ -1.69
VPS13B-202ENST00000357162 LINC00476Q8WZB0 136 aa4.46□□□□□ -1.69
VPS13B-202ENST00000357162 IGLV5-48A0A075B6I7 105 aa4.46□□□□□ -1.7
VPS13B-202ENST00000357162 Q75L30 129 aa4.46□□□□□ -1.7
VPS13B-202ENST00000357162 PRUNE2Q8WUY3 3088 aa4.46□□□□□ -1.7
VPS13B-202ENST00000357162 PLA2G5P39877 138 aa4.46□□□□□ -1.7
VPS13B-202ENST00000357162 IGLV5-52A0A0A0MRZ9 124 aa4.45□□□□□ -1.7
VPS13B-202ENST00000357162 LINC00612Q8N6U2 182 aa4.45□□□□□ -1.7
VPS13B-202ENST00000357162 C10orf99Q6UWK7 81 aa4.45□□□□□ -1.7
VPS13B-202ENST00000357162 PKD1L1Q8TDX9 2849 aa4.45□□□□□ -1.7
VPS13B-202ENST00000357162 LRCOL1A6NCL2 159 aa4.45□□□□□ -1.7
VPS13B-202ENST00000357162 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
VPS13B-202ENST00000357162 CIRBP-AS1Q8TBR5 109 aa4.44□□□□□ -1.7
VPS13B-202ENST00000357162 VPS13AQ96RL7 3174 aa4.44□□□□□ -1.7
VPS13B-202ENST00000357162 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
VPS13B-202ENST00000357162 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
VPS13B-202ENST00000357162 PRLHP81277 87 aa4.43□□□□□ -1.7
VPS13B-202ENST00000357162 SPRR4Q96PI1 79 aa4.43□□□□□ -1.7
VPS13B-202ENST00000357162 FBN2P35556 2912 aa4.43□□□□□ -1.7
VPS13B-202ENST00000357162 EPM2AB3EWF7 344 aa4.42□□□□□ -1.7
VPS13B-202ENST00000357162 CDSNQ15517 529 aa4.42□□□□□ -1.7
VPS13B-202ENST00000357162 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
VPS13B-202ENST00000357162 CRIPTQ9P021 101 aa4.42□□□□□ -1.7
VPS13B-202ENST00000357162 SSBP3-AS1Q7Z2R9 100 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 C19orf84I3L1E1 186 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 LINC00313P59037 77 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 A0A087X002 238 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 X6R8D5 127 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
VPS13B-202ENST00000357162 Q8NAQ8 132 aa4.39□□□□□ -1.71
VPS13B-202ENST00000357162 FAM104AQ969W3 186 aa4.39□□□□□ -1.71
VPS13B-202ENST00000357162 PLA2G2AP14555 144 aa4.39□□□□□ -1.71
VPS13B-202ENST00000357162 C1orf134Q5TEV5 83 aa4.39□□□□□ -1.71
VPS13B-202ENST00000357162 K7EQZ3 153 aa4.39□□□□□ -1.71
VPS13B-202ENST00000357162 CSNK1G2-AS1Q8NCQ2 148 aa4.38□□□□□ -1.71
VPS13B-202ENST00000357162 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
VPS13B-202ENST00000357162 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
VPS13B-202ENST00000357162 IGLV1-50A0A075B6I6 118 aa4.38□□□□□ -1.71
VPS13B-202ENST00000357162 COL12A1Q99715 3063 aa4.37□□□□□ -1.71
VPS13B-202ENST00000357162 IGLV7-46A0A075B6I9 117 aa4.37□□□□□ -1.71
VPS13B-202ENST00000357162 ST20-AS1Q8NBB2 130 aa4.37□□□□□ -1.71
VPS13B-202ENST00000357162 C8orf17Q9NRJ1 99 aa4.37□□□□□ -1.71
VPS13B-202ENST00000357162 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
VPS13B-202ENST00000357162 UTRNP46939 3433 aa4.36□□□□□ -1.71
VPS13B-202ENST00000357162 C18orf65Q6ZTR6 163 aa4.36□□□□□ -1.71
VPS13B-202ENST00000357162 SPINK1P00995 79 aa4.36□□□□□ -1.71
VPS13B-202ENST00000357162 DMXL1Q9Y485 3027 aa4.35□□□□□ -1.71
VPS13B-202ENST00000357162 TENM2Q9NT68 2774 aa4.35□□□□□ -1.71
VPS13B-202ENST00000357162 INAFM1C9JVW0 142 aa4.35□□□□□ -1.71
VPS13B-202ENST00000357162 TNP2Q05952 138 aa4.34□□□□□ -1.71
VPS13B-202ENST00000357162 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
VPS13B-202ENST00000357162 IGLV8-61A0A075B6I0 122 aa4.34□□□□□ -1.71
VPS13B-202ENST00000357162 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
VPS13B-202ENST00000357162 SPINT4Q6UDR6 99 aa4.33□□□□□ -1.72
VPS13B-202ENST00000357162 A0A1W2PPR1 153 aa4.33□□□□□ -1.72
VPS13B-202ENST00000357162 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
VPS13B-202ENST00000357162 Q8N377 158 aa4.33□□□□□ -1.72
VPS13B-202ENST00000357162 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms