RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CCL20P78556 96 aa4.74□□□□□ -1.65
ATXN3-201ENST00000340660 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
ATXN3-201ENST00000340660 TCL1BO95988 128 aa4.73□□□□□ -1.65
ATXN3-201ENST00000340660 SPINK8P0C7L1 97 aa4.73□□□□□ -1.65
ATXN3-201ENST00000340660 ADAMTSL4-AS1Q5T5F5 129 aa4.73□□□□□ -1.65
ATXN3-201ENST00000340660 RPL7L1Q6DKI1 246 aaKnown RBP4.73□□□□□ -1.65
ATXN3-201ENST00000340660 BIN3Q9NQY0 253 aa4.73□□□□□ -1.65
ATXN3-201ENST00000340660 LYRM1O43325 122 aa4.72□□□□□ -1.65
ATXN3-201ENST00000340660 SEC11AP67812 179 aa4.72□□□□□ -1.65
ATXN3-201ENST00000340660 COX17Q14061 63 aa4.72□□□□□ -1.65
ATXN3-201ENST00000340660 MRPL51Q4U2R6 128 aaKnown RBP4.72□□□□□ -1.65
ATXN3-201ENST00000340660 SLC25A34Q6PIV7 304 aa4.72□□□□□ -1.65
ATXN3-201ENST00000340660 A0A1B0GUT8 65 aa4.71□□□□□ -1.66
ATXN3-201ENST00000340660 K7EN84 100 aa4.71□□□□□ -1.66
ATXN3-201ENST00000340660 KCNRGQ8N5I3 272 aa4.71□□□□□ -1.66
ATXN3-201ENST00000340660 ENKURQ8TC29 256 aa4.71□□□□□ -1.66
ATXN3-201ENST00000340660 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
ATXN3-201ENST00000340660 LOC389332A0A1B0GUA5 103 aa4.7□□□□□ -1.66
ATXN3-201ENST00000340660 ATP6V1G2O95670 118 aa4.7□□□□□ -1.66
ATXN3-201ENST00000340660 IL7P13232 177 aa4.7□□□□□ -1.66
ATXN3-201ENST00000340660 BORCS7-ASMTA0A0B4J1R7 106 aa4.69□□□□□ -1.66
ATXN3-201ENST00000340660 C5orf52A6NGY3 159 aa4.69□□□□□ -1.66
ATXN3-201ENST00000340660 AKR1D1P51857 326 aa4.69□□□□□ -1.66
ATXN3-201ENST00000340660 BORCS7Q96B45 105 aa4.69□□□□□ -1.66
ATXN3-201ENST00000340660 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
ATXN3-201ENST00000340660 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
ATXN3-201ENST00000340660 SFT2D1Q8WV19 159 aa4.68□□□□□ -1.66
ATXN3-201ENST00000340660 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
ATXN3-201ENST00000340660 D6R8Y8 96 aa4.67□□□□□ -1.66
ATXN3-201ENST00000340660 S100A5P33763 92 aa4.67□□□□□ -1.66
ATXN3-201ENST00000340660 IGIPA6NJ69 53 aa4.66□□□□□ -1.66
ATXN3-201ENST00000340660 NPYP01303 97 aa4.66□□□□□ -1.66
ATXN3-201ENST00000340660 BOD1L2Q8IYS8 172 aa4.66□□□□□ -1.66
ATXN3-201ENST00000340660 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
ATXN3-201ENST00000340660 FAM218AQ96MZ4 157 aa4.66□□□□□ -1.66
ATXN3-201ENST00000340660 LINC00862A6NCI5 91 aa4.65□□□□□ -1.67
ATXN3-201ENST00000340660 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
ATXN3-201ENST00000340660 S100A12P80511 92 aa4.65□□□□□ -1.67
ATXN3-201ENST00000340660 JOSD1Q15040 202 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-201ENST00000340660 FAM104BQ5XKR9 115 aa4.65□□□□□ -1.67
ATXN3-201ENST00000340660 MBD3L1Q8WWY6 194 aa4.65□□□□□ -1.67
ATXN3-201ENST00000340660 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-201ENST00000340660 HIGD1CA8MV81 97 aa4.64□□□□□ -1.67
ATXN3-201ENST00000340660 GATCO43716 136 aaKnown RBP4.64□□□□□ -1.67
ATXN3-201ENST00000340660 CKS2P33552 79 aa4.64□□□□□ -1.67
ATXN3-201ENST00000340660 OCC1Q8TAD7 63 aa4.63□□□□□ -1.67
ATXN3-201ENST00000340660 TINCRA0A1B0GVN0 87 aa4.62□□□□□ -1.67
ATXN3-201ENST00000340660 NDUFA6P56556 154 aa4.62□□□□□ -1.67
ATXN3-201ENST00000340660 CYSLTR1Q9Y271 337 aa4.62□□□□□ -1.67
ATXN3-201ENST00000340660 A0A0U1RRA0 63 aa4.61□□□□□ -1.67
ATXN3-201ENST00000340660 DDTP30046 118 aa4.61□□□□□ -1.67
ATXN3-201ENST00000340660 LINC00158P58513 81 aa4.61□□□□□ -1.67
ATXN3-201ENST00000340660 FAM213BQ8TBF2 198 aa4.6□□□□□ -1.67
ATXN3-201ENST00000340660 RBM3P98179 157 aaKnown RBP4.59□□□□□ -1.67
ATXN3-201ENST00000340660 GNG13Q9P2W3 67 aa4.59□□□□□ -1.67
ATXN3-201ENST00000340660 FAM240BA0A1B0GVZ2 78 aa4.58□□□□□ -1.68
ATXN3-201ENST00000340660 PMVKQ15126 192 aa4.58□□□□□ -1.68
ATXN3-201ENST00000340660 MT1XP80297 61 aa4.57□□□□□ -1.68
ATXN3-201ENST00000340660 RIGQ13278 110 aa4.57□□□□□ -1.68
ATXN3-201ENST00000340660 MANBALQ9NQG1 85 aa4.57□□□□□ -1.68
ATXN3-201ENST00000340660 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
ATXN3-201ENST00000340660 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
ATXN3-201ENST00000340660 HMSDA8MTL9 139 aa4.55□□□□□ -1.68
ATXN3-201ENST00000340660 DEFB105AQ8NG35 78 aa4.54□□□□□ -1.68
ATXN3-201ENST00000340660 SSNA1O43805 119 aa4.53□□□□□ -1.68
ATXN3-201ENST00000340660 ZNF73O43830 326 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-201ENST00000340660 PDE6DO43924 150 aa4.53□□□□□ -1.68
ATXN3-201ENST00000340660 UBE2V1Q13404 147 aa4.53□□□□□ -1.68
ATXN3-201ENST00000340660 TRAV23DV6A0A075B6W5 121 aa4.52□□□□□ -1.69
ATXN3-201ENST00000340660 RPL23P62829 140 aaKnown RBP4.52□□□□□ -1.69
ATXN3-201ENST00000340660 ZNF345Q14585 488 aa4.52□□□□□ -1.69
ATXN3-201ENST00000340660 H3BRM9 83 aa4.51□□□□□ -1.69
ATXN3-201ENST00000340660 TAL2Q16559 108 aa4.51□□□□□ -1.69
ATXN3-201ENST00000340660 Q5BKY6 102 aa4.51□□□□□ -1.69
ATXN3-201ENST00000340660 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
ATXN3-201ENST00000340660 TEX49A0A1B0GTD5 131 aa4.5□□□□□ -1.69
ATXN3-201ENST00000340660 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
ATXN3-201ENST00000340660 MIR7-3HGQ8N6C7 128 aa4.5□□□□□ -1.69
ATXN3-201ENST00000340660 TRBV10-2A0A0K0K1G8 114 aa4.49□□□□□ -1.69
ATXN3-201ENST00000340660 SPINK7P58062 85 aa4.49□□□□□ -1.69
ATXN3-201ENST00000340660 TMEM136Q6ZRR5 245 aa4.49□□□□□ -1.69
ATXN3-201ENST00000340660 LINC00299Q6ZSB3 139 aa4.49□□□□□ -1.69
ATXN3-201ENST00000340660 WFDC13Q8IUB5 93 aa4.49□□□□□ -1.69
ATXN3-201ENST00000340660 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
ATXN3-201ENST00000340660 A8MU10 97 aa4.47□□□□□ -1.69
ATXN3-201ENST00000340660 DHRS4-AS1Q9P1J3 65 aa4.47□□□□□ -1.69
ATXN3-201ENST00000340660 PPBPP02775 128 aa4.46□□□□□ -1.7
ATXN3-201ENST00000340660 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
ATXN3-201ENST00000340660 SFTA2Q6UW10 78 aa4.46□□□□□ -1.7
ATXN3-201ENST00000340660 CST9LQ9H4G1 147 aa4.46□□□□□ -1.7
ATXN3-201ENST00000340660 UMAD1C9J7I0 102 aa4.45□□□□□ -1.7
ATXN3-201ENST00000340660 ORMDL2Q53FV1 153 aa4.45□□□□□ -1.7
ATXN3-201ENST00000340660 PRELID3AQ96N28 172 aa4.45□□□□□ -1.7
ATXN3-201ENST00000340660 ATP6V1G1O75348 118 aa4.44□□□□□ -1.7
ATXN3-201ENST00000340660 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
ATXN3-201ENST00000340660 S100A7L2Q5SY68 101 aa4.44□□□□□ -1.7
ATXN3-201ENST00000340660 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
ATXN3-201ENST00000340660 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
ATXN3-201ENST00000340660 Q8N8P6 123 aa4.44□□□□□ -1.7
ATXN3-201ENST00000340660 LST1O00453 97 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms