RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 FAM240AA0A1B0GVK7 77 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 PSPHP1O15172 72 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 IGKV2D-28P01615 120 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 FHL2Q14192 279 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 Q6ZQY7 126 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 Q8N3U1 123 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 UPK3BQ9BT76 320 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 MUC4Q99102 2169 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 NDUFS5O43920 106 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 C20orf197Q8N268 126 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 HIGD2AQ9BW72 106 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 OCR1Q9BZK8 76 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 BOD1L1Q8NFC6 3051 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 LINC01546A6NGU7 62 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 H3BQ85 93 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 CCDC179H3BU77 68 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 PDE6GP18545 87 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 UBE2AP49459 152 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.98□□□□□ -2.09
HERC4-201ENST00000277817 WFDC9Q8NEX5 89 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 HRNRQ86YZ3 2850 aaPredicted RBP1.98□□□□□ -2.09
HERC4-201ENST00000277817 BPY2O14599 106 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 SYCNQ0VAF6 134 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 LELP1Q5T871 98 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 FAT1Q14517 4588 aa1.98□□□□□ -2.09
HERC4-201ENST00000277817 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.97□□□□□ -2.09
HERC4-201ENST00000277817 UQCRQO14949 82 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 Q8IZM0 81 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 C15orf56Q8N910 161 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
HERC4-201ENST00000277817 A0A087WYN8 130 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 RPL37AP8A6NKH3 93 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 FSHBP01225 129 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 CCKP06307 115 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 NANOS2P60321 138 aaKnown RBP1.97□□□□□ -2.09
HERC4-201ENST00000277817 KIAA0087Q14695 138 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 C3orf84H3BNL1 204 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 J3KT08 172 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 NTM-AS1Q6ZSK4 140 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 C3orf22Q8N5N4 141 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 APCP25054 2843 aa1.97□□□□□ -2.09
HERC4-201ENST00000277817 A8MTW9 85 aa1.96□□□□□ -2.09
HERC4-201ENST00000277817 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.09
HERC4-201ENST00000277817 COX17Q14061 63 aa1.96□□□□□ -2.09
HERC4-201ENST00000277817 Q6ZRU5 148 aa1.96□□□□□ -2.09
HERC4-201ENST00000277817 CSMD1Q96PZ7 3565 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 CSMD2Q7Z408 3487 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 A0A0J9YWU9 116 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 ZNF73O43830 326 aaPredicted RBP1.96□□□□□ -2.1
HERC4-201ENST00000277817 Q8N2B8 174 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 C7orf33Q8WU49 177 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 A0A087WVE0 104 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 M0R378 163 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 NDUFB1O75438 58 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 MP68P56378 58 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 TMEM258P61165 79 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 LCE5AQ5TCM9 118 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 Q8N814 137 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 IMUPQ9GZP8 106 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 PRO0461Q9UI25 63 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 IGHV6-1A0A0B4J1U7 121 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 TRBV10-3A0A0K0K1G6 114 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 A0A0U1RQV1 116 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 C16orf95Q9H693 158 aa1.96□□□□□ -2.1
HERC4-201ENST00000277817 Q6ZTC4 211 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 RBM12B-AS1Q9P1G2 102 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 SNURFQ9Y675 71 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 CSMD3Q7Z407 3707 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 TRAV10A0A0B4J240 114 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 LCE1DQ5T752 114 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 KLK5Q9Y337 293 aaPredicted RBP1.95□□□□□ -2.1
HERC4-201ENST00000277817 CELSR1Q9NYQ6 3014 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 ADGRG4Q8IZF6 3080 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 M0R2N4 97 aa1.95□□□□□ -2.1
HERC4-201ENST00000277817 COX7CP15954 63 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 ATP5EP2Q5VTU8 51 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 LYPD5Q6UWN5 251 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 SVEP1Q4LDE5 3571 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 GIG44P09565 113 aaPredicted RBP1.94□□□□□ -2.1
HERC4-201ENST00000277817 Q6Q795 121 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 SOSTDC1Q6X4U4 206 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 WFDC10BQ8IUB3 73 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 B9D2Q9BPU9 175 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 STAB2Q8WWQ8 2551 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 Q5XG85 94 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 CELA1Q9UNI1 258 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 FBN1P35555 2871 aaKnown RBP1.94□□□□□ -2.1
HERC4-201ENST00000277817 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
HERC4-201ENST00000277817 PLAC8L1A1L4L8 177 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 C14orf177Q52M58 125 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 C1orf195Q5TG92 126 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.94□□□□□ -2.1
HERC4-201ENST00000277817 PKIGQ9Y2B9 76 aa1.94□□□□□ -2.1
HERC4-201ENST00000277817 FAM236DA0A1B0GTK5 79 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 FAM236CP0DP71 79 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms