RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MIFP14174 115 aa7.99□□□□□ -1.13
CLN6-217ENST00000636964 CDKN2A-AS1Q9UH64 79 aa7.99□□□□□ -1.13
CLN6-217ENST00000636964 TRBV6-8A0A0A6YYG3 113 aa7.99□□□□□ -1.13
CLN6-217ENST00000636964 CDC42SE2Q9NRR3 84 aa7.99□□□□□ -1.13
CLN6-217ENST00000636964 INAFM2P0DMQ5 153 aa7.98□□□□□ -1.13
CLN6-217ENST00000636964 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
CLN6-217ENST00000636964 C20orf197Q8N268 126 aa7.98□□□□□ -1.13
CLN6-217ENST00000636964 IGLV4-60A0A075B6I1 120 aa7.98□□□□□ -1.13
CLN6-217ENST00000636964 SOSTDC1Q6X4U4 206 aa7.98□□□□□ -1.13
CLN6-217ENST00000636964 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
CLN6-217ENST00000636964 SPART-AS1P0CW21 52 aa7.97□□□□□ -1.13
CLN6-217ENST00000636964 EGFEM1PQ0D2K5 195 aa7.97□□□□□ -1.13
CLN6-217ENST00000636964 LAMTOR3Q9UHA4 124 aa7.97□□□□□ -1.13
CLN6-217ENST00000636964 ANK2Q01484 3957 aa7.96□□□□□ -1.13
CLN6-217ENST00000636964 CMYA5Q8N3K9 4069 aa7.96□□□□□ -1.14
CLN6-217ENST00000636964 USP17L23D6RBM5 183 aa7.96□□□□□ -1.14
CLN6-217ENST00000636964 COX7A2LO14548 114 aa7.96□□□□□ -1.14
CLN6-217ENST00000636964 PRR26Q8N8Z3 221 aa7.96□□□□□ -1.14
CLN6-217ENST00000636964 TENM3Q9P273 2699 aa7.95□□□□□ -1.14
CLN6-217ENST00000636964 TRBV7-6A0A0J9YX20 115 aa7.95□□□□□ -1.14
CLN6-217ENST00000636964 CCKP06307 115 aa7.94□□□□□ -1.14
CLN6-217ENST00000636964 LINC00308Q8TCZ7 52 aa7.94□□□□□ -1.14
CLN6-217ENST00000636964 BAALC-AS2P0C853 105 aa7.93□□□□□ -1.14
CLN6-217ENST00000636964 C6orf223Q8N319 242 aa7.93□□□□□ -1.14
CLN6-217ENST00000636964 ZNF625Q96I27 306 aaPredicted RBP7.93□□□□□ -1.14
CLN6-217ENST00000636964 A0A087WVE0 104 aa7.93□□□□□ -1.14
CLN6-217ENST00000636964 CLPSL2Q6UWE3 100 aa7.93□□□□□ -1.14
CLN6-217ENST00000636964 Q9HAA7 133 aa7.93□□□□□ -1.14
CLN6-217ENST00000636964 IGKV3D-7A0A0C4DH55 119 aa7.92□□□□□ -1.14
CLN6-217ENST00000636964 Q8N3U1 123 aa7.92□□□□□ -1.14
CLN6-217ENST00000636964 IGLV5-45A0A087WSX0 123 aa7.91□□□□□ -1.14
CLN6-217ENST00000636964 XCL1P47992 114 aa7.91□□□□□ -1.14
CLN6-217ENST00000636964 NDUFA1O15239 70 aa7.91□□□□□ -1.14
CLN6-217ENST00000636964 SERTAD4-AS1Q5TG53 156 aa7.91□□□□□ -1.14
CLN6-217ENST00000636964 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
CLN6-217ENST00000636964 LYPD5Q6UWN5 251 aa7.9□□□□□ -1.14
CLN6-217ENST00000636964 SMIM1B2RUZ4 78 aa7.9□□□□□ -1.14
CLN6-217ENST00000636964 C8orf87E5RJ46 101 aa7.9□□□□□ -1.15
CLN6-217ENST00000636964 Q6ZTC4 211 aa7.89□□□□□ -1.15
CLN6-217ENST00000636964 Q9H8V8 135 aa7.89□□□□□ -1.15
CLN6-217ENST00000636964 A0A0J9YWU9 116 aa7.88□□□□□ -1.15
CLN6-217ENST00000636964 H7BZZ5 65 aa7.88□□□□□ -1.15
CLN6-217ENST00000636964 GHRHP01286 108 aa7.88□□□□□ -1.15
CLN6-217ENST00000636964 FAM19A3Q7Z5A8 133 aa7.88□□□□□ -1.15
CLN6-217ENST00000636964 MDFIQ99750 246 aa7.88□□□□□ -1.15
CLN6-217ENST00000636964 LINC00846Q9NV44 126 aa7.88□□□□□ -1.15
CLN6-217ENST00000636964 TOMM7Q9P0U1 55 aa7.88□□□□□ -1.15
CLN6-217ENST00000636964 IGLV5-39A0A0G2JS06 123 aa7.87□□□□□ -1.15
CLN6-217ENST00000636964 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
CLN6-217ENST00000636964 KTN1-AS1Q86SY8 53 aa7.87□□□□□ -1.15
CLN6-217ENST00000636964 TM2D3Q9BRN9 247 aa7.87□□□□□ -1.15
CLN6-217ENST00000636964 NANOS2P60321 138 aaKnown RBP7.86□□□□□ -1.15
CLN6-217ENST00000636964 LINC00269Q8N2A0 174 aa7.86□□□□□ -1.15
CLN6-217ENST00000636964 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
CLN6-217ENST00000636964 A0A087WYN8 130 aa7.86□□□□□ -1.15
CLN6-217ENST00000636964 ANGP03950 147 aaKnown RBP7.86□□□□□ -1.15
CLN6-217ENST00000636964 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
CLN6-217ENST00000636964 A0A1B0GUV1 79 aa7.85□□□□□ -1.15
CLN6-217ENST00000636964 IGHV3OR16-9A0A0B4J2B5 98 aa7.85□□□□□ -1.15
CLN6-217ENST00000636964 K7EIL1 84 aa7.85□□□□□ -1.15
CLN6-217ENST00000636964 KPRPQ5T749 579 aaPredicted RBP7.84□□□□□ -1.15
CLN6-217ENST00000636964 LINC00337Q8N6G1 96 aa7.83□□□□□ -1.16
CLN6-217ENST00000636964 DNAH3Q8TD57 4116 aa7.83□□□□□ -1.16
CLN6-217ENST00000636964 IGKV2-28A0A075B6P5 120 aa7.83□□□□□ -1.16
CLN6-217ENST00000636964 F8WEM9 126 aa7.83□□□□□ -1.16
CLN6-217ENST00000636964 IGKV2D-28P01615 120 aa7.83□□□□□ -1.16
CLN6-217ENST00000636964 OBSCN-AS1Q96MR7 158 aa7.83□□□□□ -1.16
CLN6-217ENST00000636964 A0A087WZ39 114 aa7.82□□□□□ -1.16
CLN6-217ENST00000636964 Q6JHZ5 121 aa7.82□□□□□ -1.16
CLN6-217ENST00000636964 LELP1Q5T871 98 aa7.82□□□□□ -1.16
CLN6-217ENST00000636964 COX7B2Q8TF08 81 aa7.82□□□□□ -1.16
CLN6-217ENST00000636964 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
CLN6-217ENST00000636964 REG3AQ06141 175 aa7.81□□□□□ -1.16
CLN6-217ENST00000636964 TMEM256-PLSCR3K7ERE1 68 aa7.81□□□□□ -1.16
CLN6-217ENST00000636964 DEFB131BA0A096LNP1 70 aa7.81□□□□□ -1.16
CLN6-217ENST00000636964 RPL28P46779 137 aaKnown RBP7.81□□□□□ -1.16
CLN6-217ENST00000636964 KLK12Q9UKR0 248 aa7.81□□□□□ -1.16
CLN6-217ENST00000636964 M0R378 163 aa7.8□□□□□ -1.16
CLN6-217ENST00000636964 SNURFQ9Y675 71 aa7.8□□□□□ -1.16
CLN6-217ENST00000636964 NCR3O14931 201 aa7.8□□□□□ -1.16
CLN6-217ENST00000636964 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
CLN6-217ENST00000636964 STAB2Q8WWQ8 2551 aa7.8□□□□□ -1.16
CLN6-217ENST00000636964 CHCHD10Q8WYQ3 142 aaPredicted RBP7.8□□□□□ -1.16
CLN6-217ENST00000636964 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
CLN6-217ENST00000636964 DNAL4O96015 105 aa7.79□□□□□ -1.16
CLN6-217ENST00000636964 WFDC10BQ8IUB3 73 aa7.79□□□□□ -1.16
CLN6-217ENST00000636964 SMIM11BQ8TCY0 68 aa7.79□□□□□ -1.16
CLN6-217ENST00000636964 SLPIP03973 132 aa7.78□□□□□ -1.16
CLN6-217ENST00000636964 ESRGQ1W209 222 aa7.77□□□□□ -1.17
CLN6-217ENST00000636964 RMI2Q96E14 147 aa7.77□□□□□ -1.17
CLN6-217ENST00000636964 ZNF73O43830 326 aaPredicted RBP7.77□□□□□ -1.17
CLN6-217ENST00000636964 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
CLN6-217ENST00000636964 LINC00158P58513 81 aa7.76□□□□□ -1.17
CLN6-217ENST00000636964 ENHOQ6UWT2 76 aa7.75□□□□□ -1.17
CLN6-217ENST00000636964 H3BNG1 76 aa7.75□□□□□ -1.17
CLN6-217ENST00000636964 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
CLN6-217ENST00000636964 LECT2O14960 151 aa7.74□□□□□ -1.17
CLN6-217ENST00000636964 TRAV13-2A0A0B4J235 113 aa7.73□□□□□ -1.17
CLN6-217ENST00000636964 CRPP02741 224 aa7.73□□□□□ -1.17
CLN6-217ENST00000636964 KLKP1Q107X0 134 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms