RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 Q8NBF4 154 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 TM2D3Q9BRN9 247 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 FHL3Q13643 280 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 C11orf72Q8NBR9 251 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 LINC00476Q8WZB0 136 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 EPM2AB3EWF7 344 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 TYMSOSQ8TAI1 123 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
RFX3-212ENST00000617270 PHF5AQ7RTV0 110 aaKnown RBP4.16□□□□□ -1.74
RFX3-212ENST00000617270 LINC01561Q8N1V8 128 aa4.16□□□□□ -1.74
RFX3-212ENST00000617270 FAM229AH3BQW9 127 aa4.16□□□□□ -1.74
RFX3-212ENST00000617270 Q6ZRX8 168 aa4.16□□□□□ -1.74
RFX3-212ENST00000617270 ACANP16112 2415 aa4.16□□□□□ -1.74
RFX3-212ENST00000617270 IGLV5-39A0A0G2JS06 123 aa4.15□□□□□ -1.74
RFX3-212ENST00000617270 ST20-AS1Q8NBB2 130 aa4.15□□□□□ -1.74
RFX3-212ENST00000617270 ELOF1P60002 83 aaKnown RBP4.15□□□□□ -1.74
RFX3-212ENST00000617270 ATG2AQ2TAZ0 1938 aa4.15□□□□□ -1.74
RFX3-212ENST00000617270 H3BPC8 53 aa4.15□□□□□ -1.75
RFX3-212ENST00000617270 IGLV6-57P01721 117 aa4.15□□□□□ -1.75
RFX3-212ENST00000617270 J3QL48 77 aa4.15□□□□□ -1.75
RFX3-212ENST00000617270 Q6ZQT0 140 aa4.15□□□□□ -1.75
RFX3-212ENST00000617270 A8MUN3 132 aa4.14□□□□□ -1.75
RFX3-212ENST00000617270 RTL8CO15255 209 aa4.14□□□□□ -1.75
RFX3-212ENST00000617270 COA5Q86WW8 74 aa4.14□□□□□ -1.75
RFX3-212ENST00000617270 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
RFX3-212ENST00000617270 FAM19A4Q96LR4 140 aa4.14□□□□□ -1.75
RFX3-212ENST00000617270 KIAA1549LQ6ZVL6 1849 aa4.14□□□□□ -1.75
RFX3-212ENST00000617270 C9orf129Q5T035 196 aaKnown RBP4.14□□□□□ -1.75
RFX3-212ENST00000617270 TET2Q6N021 2002 aaPredicted RBP4.14□□□□□ -1.75
RFX3-212ENST00000617270 KIF25-AS1Q9Y6Z4 181 aa4.14□□□□□ -1.75
RFX3-212ENST00000617270 C16orf95Q9H693 158 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 PCNX3Q9H6A9 2034 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 UQCR11O14957 56 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 Q6ZRP5 223 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 RAI1Q7Z5J4 1906 aaPredicted RBP4.13□□□□□ -1.75
RFX3-212ENST00000617270 C16orf90A8MZG2 172 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 NHLRC4P0CG21 123 aaPredicted RBP4.13□□□□□ -1.75
RFX3-212ENST00000617270 LINC00315P59091 139 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
RFX3-212ENST00000617270 LOC110117498A0A087WWA1 95 aa4.12□□□□□ -1.75
RFX3-212ENST00000617270 SMCPP49901 116 aaPredicted RBP4.12□□□□□ -1.75
RFX3-212ENST00000617270 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
RFX3-212ENST00000617270 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
RFX3-212ENST00000617270 COX8CQ7Z4L0 72 aa4.11□□□□□ -1.75
RFX3-212ENST00000617270 CHD8Q9HCK8 2581 aa4.11□□□□□ -1.75
RFX3-212ENST00000617270 A0A0D9SG42 100 aa4.11□□□□□ -1.75
RFX3-212ENST00000617270 K7EQZ3 153 aa4.11□□□□□ -1.75
RFX3-212ENST00000617270 A0A1B0GW54 56 aa4.11□□□□□ -1.75
RFX3-212ENST00000617270 TRBV7-4A0A0J9YYF1 115 aa4.1□□□□□ -1.75
RFX3-212ENST00000617270 BCE1O60756 84 aa4.1□□□□□ -1.75
RFX3-212ENST00000617270 C9orf92A6NGG3 77 aa4.1□□□□□ -1.75
RFX3-212ENST00000617270 A8MWP4 228 aa4.1□□□□□ -1.75
RFX3-212ENST00000617270 DSCR10P59022 87 aa4.1□□□□□ -1.75
RFX3-212ENST00000617270 CEP192Q8TEP8 1941 aa4.09□□□□□ -1.75
RFX3-212ENST00000617270 USP9YO00507 2555 aaPredicted RBP4.09□□□□□ -1.75
RFX3-212ENST00000617270 A0A1W2PPR1 153 aa4.09□□□□□ -1.75
RFX3-212ENST00000617270 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
RFX3-212ENST00000617270 OBSCN-AS1Q96MR7 158 aa4.09□□□□□ -1.75
RFX3-212ENST00000617270 MTORP42345 2549 aa4.09□□□□□ -1.75
RFX3-212ENST00000617270 NBDYA0A0U1RRE5 68 aa4.09□□□□□ -1.76
RFX3-212ENST00000617270 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
RFX3-212ENST00000617270 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
RFX3-212ENST00000617270 PRO0461Q9UI25 63 aa4.07□□□□□ -1.76
RFX3-212ENST00000617270 CEP295Q9C0D2 2601 aa4.07□□□□□ -1.76
RFX3-212ENST00000617270 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
RFX3-212ENST00000617270 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
RFX3-212ENST00000617270 WDR87Q6ZQQ6 2873 aa4.06□□□□□ -1.76
RFX3-212ENST00000617270 LINC01546A6NGU7 62 aa4.06□□□□□ -1.76
RFX3-212ENST00000617270 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
RFX3-212ENST00000617270 LINC00588Q9Y4M8 146 aa4.06□□□□□ -1.76
RFX3-212ENST00000617270 IGLV5-48A0A075B6I7 105 aa4.05□□□□□ -1.76
RFX3-212ENST00000617270 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
RFX3-212ENST00000617270 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
RFX3-212ENST00000617270 LINC00304Q8N9R0 145 aa4.04□□□□□ -1.76
RFX3-212ENST00000617270 CD164Q04900 197 aa4.04□□□□□ -1.76
RFX3-212ENST00000617270 LRP4O75096 1905 aa4.04□□□□□ -1.76
RFX3-212ENST00000617270 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
RFX3-212ENST00000617270 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
RFX3-212ENST00000617270 C8orf17Q9NRJ1 99 aa4.04□□□□□ -1.76
RFX3-212ENST00000617270 PTPRSQ13332 1948 aa4.03□□□□□ -1.76
RFX3-212ENST00000617270 SPTBN4Q9H254 2564 aa4.03□□□□□ -1.76
RFX3-212ENST00000617270 POLQO75417 2590 aa4.03□□□□□ -1.76
RFX3-212ENST00000617270 ERC2-IT1O76042 136 aa4.03□□□□□ -1.76
RFX3-212ENST00000617270 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
RFX3-212ENST00000617270 A0A1W2PNN7 141 aa4.03□□□□□ -1.76
RFX3-212ENST00000617270 IGFL1Q6UW32 110 aa4.03□□□□□ -1.76
RFX3-212ENST00000617270 H3BNG1 76 aa4.03□□□□□ -1.77
RFX3-212ENST00000617270 Q8N1X5 172 aa4.02□□□□□ -1.77
RFX3-212ENST00000617270 DNAH10OSP0CZ25 163 aa4.02□□□□□ -1.77
RFX3-212ENST00000617270 ANKRD11Q6UB99 2663 aaPredicted RBP4.02□□□□□ -1.77
RFX3-212ENST00000617270 LINC00336Q6ZUF6 198 aa4.02□□□□□ -1.77
RFX3-212ENST00000617270 LCA10Q71F78 164 aa4.02□□□□□ -1.77
RFX3-212ENST00000617270 COL5A1P20908 1838 aaPredicted RBP4.02□□□□□ -1.77
RFX3-212ENST00000617270 A0A1B0GVX0 72 aa4.01□□□□□ -1.77
RFX3-212ENST00000617270 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
RFX3-212ENST00000617270 COL4A4P53420 1690 aaPredicted RBP4.01□□□□□ -1.77
RFX3-212ENST00000617270 IGLV1-50A0A075B6I6 118 aa4□□□□□ -1.77
RFX3-212ENST00000617270 RBM12B-AS1Q9P1G2 102 aa4□□□□□ -1.77
RFX3-212ENST00000617270 ANAPC11Q9NYG5 84 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 562.9 ms