RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 C2orf48Q96LS8 159 aa10.48□□□□□ -0.73
NR1H3-235ENST00000616973 A0A1B0GX51 115 aa10.47□□□□□ -0.73
NR1H3-235ENST00000616973 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
NR1H3-235ENST00000616973 Q9HAA7 133 aa10.47□□□□□ -0.73
NR1H3-235ENST00000616973 XGP55808 180 aa10.46□□□□□ -0.73
NR1H3-235ENST00000616973 MRAPQ8TCY5 172 aa10.46□□□□□ -0.73
NR1H3-235ENST00000616973 CAMK2N2Q96S95 79 aa10.46□□□□□ -0.73
NR1H3-235ENST00000616973 NCR3O14931 201 aa10.45□□□□□ -0.74
NR1H3-235ENST00000616973 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
NR1H3-235ENST00000616973 ANK2Q01484 3957 aa10.45□□□□□ -0.74
NR1H3-235ENST00000616973 LECT2O14960 151 aa10.45□□□□□ -0.74
NR1H3-235ENST00000616973 S100A7L2Q5SY68 101 aa10.44□□□□□ -0.74
NR1H3-235ENST00000616973 LINC00167Q96N53 147 aa10.44□□□□□ -0.74
NR1H3-235ENST00000616973 LINC00588Q9Y4M8 146 aa10.44□□□□□ -0.74
NR1H3-235ENST00000616973 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
NR1H3-235ENST00000616973 MT-ATP8P03928 68 aa10.43□□□□□ -0.74
NR1H3-235ENST00000616973 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
NR1H3-235ENST00000616973 Q6ZRU5 148 aa10.42□□□□□ -0.74
NR1H3-235ENST00000616973 ACYP1P07311 99 aa10.41□□□□□ -0.74
NR1H3-235ENST00000616973 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
NR1H3-235ENST00000616973 C6orf99Q4VX62 202 aa10.4□□□□□ -0.74
NR1H3-235ENST00000616973 Q8N814 137 aa10.4□□□□□ -0.74
NR1H3-235ENST00000616973 ORMDL1Q9P0S3 153 aa10.4□□□□□ -0.74
NR1H3-235ENST00000616973 NDUFC2-KCTD14E9PQ53 114 aa10.39□□□□□ -0.75
NR1H3-235ENST00000616973 RPL18AQ02543 176 aaKnown RBP10.39□□□□□ -0.75
NR1H3-235ENST00000616973 OBSCN-AS1Q96MR7 158 aa10.39□□□□□ -0.75
NR1H3-235ENST00000616973 UPK3BQ9BT76 320 aa10.39□□□□□ -0.75
NR1H3-235ENST00000616973 XAGE1AQ9HD64 81 aa10.39□□□□□ -0.75
NR1H3-235ENST00000616973 SNCGO76070 127 aa10.38□□□□□ -0.75
NR1H3-235ENST00000616973 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
NR1H3-235ENST00000616973 VPREB1P12018 145 aa10.37□□□□□ -0.75
NR1H3-235ENST00000616973 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
NR1H3-235ENST00000616973 LINC00575Q6W349 94 aa10.37□□□□□ -0.75
NR1H3-235ENST00000616973 NOTCH1P46531 2555 aa10.36□□□□□ -0.75
NR1H3-235ENST00000616973 SLPIP03973 132 aa10.36□□□□□ -0.75
NR1H3-235ENST00000616973 RMI2Q96E14 147 aa10.36□□□□□ -0.75
NR1H3-235ENST00000616973 MDFIQ99750 246 aa10.36□□□□□ -0.75
NR1H3-235ENST00000616973 TRBV10-3A0A0K0K1G6 114 aa10.35□□□□□ -0.75
NR1H3-235ENST00000616973 M0R378 163 aa10.33□□□□□ -0.76
NR1H3-235ENST00000616973 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
NR1H3-235ENST00000616973 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
NR1H3-235ENST00000616973 C9orf129Q5T035 196 aaKnown RBP10.33□□□□□ -0.76
NR1H3-235ENST00000616973 TLX1NBP0CAT3 122 aa10.32□□□□□ -0.76
NR1H3-235ENST00000616973 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
NR1H3-235ENST00000616973 Q6ZRP5 223 aa10.32□□□□□ -0.76
NR1H3-235ENST00000616973 TRBV7-6A0A0J9YX20 115 aa10.31□□□□□ -0.76
NR1H3-235ENST00000616973 Q6Q795 121 aa10.31□□□□□ -0.76
NR1H3-235ENST00000616973 DIRC1Q969H9 104 aa10.31□□□□□ -0.76
NR1H3-235ENST00000616973 B9D2Q9BPU9 175 aa10.31□□□□□ -0.76
NR1H3-235ENST00000616973 hADV29S1A0JD25 119 aa10.31□□□□□ -0.76
NR1H3-235ENST00000616973 NBEAL1Q6ZS30 2694 aa10.3□□□□□ -0.76
NR1H3-235ENST00000616973 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
NR1H3-235ENST00000616973 ANAPC13Q9BS18 74 aa10.3□□□□□ -0.76
NR1H3-235ENST00000616973 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
NR1H3-235ENST00000616973 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
NR1H3-235ENST00000616973 JMJD7-PLA2G4BH0Y9G9 81 aa10.29□□□□□ -0.76
NR1H3-235ENST00000616973 ZNF73O43830 326 aaPredicted RBP10.29□□□□□ -0.76
NR1H3-235ENST00000616973 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
NR1H3-235ENST00000616973 GAGE2BQ13066 116 aa10.28□□□□□ -0.76
NR1H3-235ENST00000616973 TTC32Q5I0X7 151 aa10.28□□□□□ -0.76
NR1H3-235ENST00000616973 GAGE2AQ6NT46 116 aa10.28□□□□□ -0.76
NR1H3-235ENST00000616973 MGAM2Q2M2H8 2515 aa10.27□□□□□ -0.76
NR1H3-235ENST00000616973 H3BQ85 93 aa10.27□□□□□ -0.76
NR1H3-235ENST00000616973 CASC10Q5T4H9 136 aa10.27□□□□□ -0.76
NR1H3-235ENST00000616973 PLA2G2DQ9UNK4 145 aa10.27□□□□□ -0.76
NR1H3-235ENST00000616973 ELOF1P60002 83 aaKnown RBP10.26□□□□□ -0.77
NR1H3-235ENST00000616973 LINC00643Q86TS7 51 aa10.26□□□□□ -0.77
NR1H3-235ENST00000616973 COX7BP24311 80 aa10.25□□□□□ -0.77
NR1H3-235ENST00000616973 SMCR5Q8TEV8 140 aa10.25□□□□□ -0.77
NR1H3-235ENST00000616973 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
NR1H3-235ENST00000616973 TRBV7-7A0A0K0K1E9 115 aa10.25□□□□□ -0.77
NR1H3-235ENST00000616973 CCKP06307 115 aa10.23□□□□□ -0.77
NR1H3-235ENST00000616973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.23□□□□□ -0.77
NR1H3-235ENST00000616973 IMUPQ9GZP8 106 aa10.22□□□□□ -0.77
NR1H3-235ENST00000616973 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.77
NR1H3-235ENST00000616973 Q6ZQY7 126 aa10.21□□□□□ -0.77
NR1H3-235ENST00000616973 NKAPP1Q8N9T2 125 aa10.21□□□□□ -0.77
NR1H3-235ENST00000616973 DNAH1Q9P2D7 4330 aa10.21□□□□□ -0.77
NR1H3-235ENST00000616973 GHRHP01286 108 aa10.21□□□□□ -0.78
NR1H3-235ENST00000616973 SERTAD4-AS1Q5TG53 156 aa10.21□□□□□ -0.78
NR1H3-235ENST00000616973 KCNQ1DNQ9H478 68 aa10.21□□□□□ -0.78
NR1H3-235ENST00000616973 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
NR1H3-235ENST00000616973 DNAH9Q9NYC9 4486 aa10.2□□□□□ -0.78
NR1H3-235ENST00000616973 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
NR1H3-235ENST00000616973 UBE2DNLQ8IWF7 75 aa10.19□□□□□ -0.78
NR1H3-235ENST00000616973 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
NR1H3-235ENST00000616973 KRTAP1-5Q9BYS1 174 aa10.19□□□□□ -0.78
NR1H3-235ENST00000616973 SS18L2Q9UHA2 77 aa10.19□□□□□ -0.78
NR1H3-235ENST00000616973 NDUFV3P56181 108 aaKnown RBP10.18□□□□□ -0.78
NR1H3-235ENST00000616973 LOC107984640A0A0U1RRK4 108 aa10.17□□□□□ -0.78
NR1H3-235ENST00000616973 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
NR1H3-235ENST00000616973 DNHD1Q96M86 4753 aa10.16□□□□□ -0.78
NR1H3-235ENST00000616973 LOC110117498A0A087WWA1 95 aa10.16□□□□□ -0.78
NR1H3-235ENST00000616973 RBM3P98179 157 aaKnown RBP10.16□□□□□ -0.78
NR1H3-235ENST00000616973 B5MCH6 92 aa10.15□□□□□ -0.78
NR1H3-235ENST00000616973 LAMTOR3Q9UHA4 124 aa10.15□□□□□ -0.78
NR1H3-235ENST00000616973 NUPR2A6NF83 97 aa10.15□□□□□ -0.79
NR1H3-235ENST00000616973 PRYO14603 147 aa10.13□□□□□ -0.79
NR1H3-235ENST00000616973 CNBPP62633 177 aaKnown RBP10.13□□□□□ -0.79
NR1H3-235ENST00000616973 Q6JHZ5 121 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms