RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CD163L1Q9NR16 1453 aa0.99□□□□□ -2.25
SCAMP1-205ENST00000614488 CEP290O15078 2479 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 C5orf42Q9H799 3197 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 REV3LO60673 3130 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 CFAP54Q96N23 3096 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 F8WEM9 126 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 LY6G6CO95867 125 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 SAA2P0DJI9 122 aaPredicted RBP0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 ZNF137PP52743 207 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 AMELXQ99217 191 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 PSENENQ9NZ42 101 aa0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 ASCC3Q8N3C0 2202 aaKnown RBP0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 DDX60Q8IY21 1712 aaKnown RBP0.98□□□□□ -2.25
SCAMP1-205ENST00000614488 CFAP47Q6ZTR5 3102 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 NOTCH1P46531 2555 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 A0A1B0GWA3 101 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 C7orf77A4D0Y5 90 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 UQCR11O14957 56 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 SMIM11AP58511 58 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 CFAP126Q5VTH2 177 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 PLAC4Q8WY50 150 aa0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 ASH1LQ9NR48 2969 aaKnown RBP0.97□□□□□ -2.25
SCAMP1-205ENST00000614488 F5P12259 2224 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 BDP1A6H8Y1 2624 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 UNC79Q9P2D8 2635 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 LRRC37A2A6NM11 1700 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 A0A087WVE0 104 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 KANTRA0A1W2PQU2 76 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 H3BUT2 72 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 ARMS2P0C7Q2 107 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 SPINT3P49223 89 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 SNRPFP62306 86 aaKnown RBP0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 BVES-AS1Q5T3Y7 98 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 C10orf99Q6UWK7 81 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 WDFY4Q6ZS81 3184 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 FAM208BQ5VWN6 2430 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 CHD8Q9HCK8 2581 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 ZDBF2Q9HCK1 2354 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 TECTAO75443 2155 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 RGPD2P0DJD1 1756 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 ANKRD36CQ5JPF3 1778 aa0.96□□□□□ -2.26
SCAMP1-205ENST00000614488 ANKRD36A6QL64 1941 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 LRRC37AA6NMS7 1700 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 DDX60LQ5H9U9 1706 aaKnown RBP0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 XIRP2A4UGR9 3374 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 DNAH14Q0VDD8 3507 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 IQCF6A8MYZ5 107 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 F2Z2F3 143 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 BCE1O60756 84 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 LEPROTL1O95214 131 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 DEFA5Q01523 94 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 PRB3Q04118 309 aaPredicted RBP0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 LINC00575Q6W349 94 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 ASPMQ8IZT6 3477 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 A0A0G2JMZ2 1700 aa0.95□□□□□ -2.26
SCAMP1-205ENST00000614488 FASNP49327 2511 aaKnown RBP0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 ZNF462Q96JM2 2506 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 EPG5Q9HCE0 2579 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 CHD6Q8TD26 2715 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 GVQW2A0A096LPI5 108 aaPredicted RBP0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 HMGN2P05204 90 aaKnown RBP0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 MGPP08493 103 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 IGLC2P0DOY2 106 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 IGLC3P0DOY3 106 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 Q6ZRX8 168 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 LINC00643Q86TS7 51 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 SMIM4Q8WVI0 70 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 LINC00472Q9H8W2 130 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 SMCO4Q9NRQ5 59 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 FAM186AA6NE01 2351 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 DNAH12Q6ZR08 3092 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 PLXNB2O15031 1838 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 SPTBN4Q9H254 2564 aa0.94□□□□□ -2.26
SCAMP1-205ENST00000614488 TENM3Q9P273 2699 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 DNAJC13O75165 2243 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 A0A096LNT2 108 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 D6R8Y8 96 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 ACYP1P07311 99 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 COX17Q14061 63 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 MUSTN1Q8IVN3 82 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 DEFB107AQ8IZN7 70 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 SMIM11BQ8TCY0 68 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 SPRR4Q96PI1 79 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 PROK2Q9HC23 129 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 MYO15AQ9UKN7 3530 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 CADP27708 2225 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 MAST4O15021 2626 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 A0A1B0GUL6 1792 aa0.93□□□□□ -2.26
SCAMP1-205ENST00000614488 TRANK1O15050 2925 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 DMXL1Q9Y485 3027 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 USP24Q9UPU5 2620 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 ACACBO00763 2458 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 G3V318 75 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 PDCD5O14737 125 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 CFDP00746 253 aaPredicted RBP0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 GCHFRP30047 84 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 RPL37P61927 97 aaKnown RBP0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 SPINK13Q1W4C9 94 aa0.92□□□□□ -2.26
SCAMP1-205ENST00000614488 SMIM5Q71RC9 77 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms